Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 4.8e-83 311.2 168 100.0
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 3.0e-37 159.1 173 59.0
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 1.5e-36 156.8 176 59.7
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 2.0e-36 156.4 178 58.4
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 4.4e-36 155.2 178 56.7
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 6.3e-35 151.4 178 58.4
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 6.3e-35 151.4 177 57.1
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 1.8e-34 149.8 180 56.1
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 5.3e-34 148.3 172 56.4
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 7.0e-34 147.9 179 57.0
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 7.0e-34 147.9 172 58.7
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 2.0e-33 146.4 183 54.1
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 2.0e-33 146.4 180 53.3
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 7.7e-33 144.4 178 55.1
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 7.7e-33 144.4 176 57.4
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 7.7e-33 144.4 184 54.9
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 1.7e-32 143.3 168 56.5
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 1.7e-32 143.3 169 57.4
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 2.2e-32 142.9 169 56.2
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 5.0e-32 141.7 184 55.4
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 5.0e-32 141.7 146 63.0
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 6.5e-32 141.4 169 57.4
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 6.5e-32 141.4 171 57.9
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 1.1e-31 140.6 130 66.2
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 1.1e-31 140.6 169 57.4
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 1.5e-31 140.2 130 66.2
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 1.5e-31 140.2 170 55.9
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 1.5e-31 140.2 170 55.9
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 1.9e-31 139.8 172 55.2
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 2.5e-31 139.4 172 57.6
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 2.5e-31 139.4 173 54.9
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 3.2e-31 139.0 171 58.5
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 9.4e-31 137.5 182 53.8
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 9.4e-31 137.5 168 54.8
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 9.4e-31 137.5 175 54.9
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 1.2e-30 137.1 181 55.8
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 1.2e-30 137.1 163 57.7
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 1.6e-30 136.7 169 52.7
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 2.7e-30 136.0 182 52.2
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 2.7e-30 136.0 129 65.9
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 2.7e-30 136.0 187 52.4
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 3.6e-30 135.6 186 55.9
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 3.6e-30 135.6 173 53.2
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 6.1e-30 134.8 128 64.8
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 8.0e-30 134.4 174 53.4
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 8.0e-30 134.4 168 56.0
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 8.0e-30 134.4 168 56.0
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 8.0e-30 134.4 173 51.4
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 8.0e-30 134.4 169 57.4
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 1.8e-29 133.3 158 58.2
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 3.0e-29 132.5 172 52.9
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 3.0e-29 132.5 171 54.4
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 4.0e-29 132.1 156 58.3
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 4.0e-29 132.1 184 49.5
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 4.0e-29 132.1 166 53.6
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 4.0e-29 132.1 170 54.1
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 5.2e-29 131.7 171 55.6
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 5.2e-29 131.7 107 69.2
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 5.2e-29 131.7 170 55.3
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 6.8e-29 131.3 150 57.3
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 6.8e-29 131.3 170 53.5
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 8.8e-29 131.0 170 52.4
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 8.8e-29 131.0 170 52.4
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 1.2e-28 130.6 179 51.4
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 1.2e-28 130.6 180 51.7
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 2.0e-28 129.8 168 52.4
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 2.6e-28 129.4 168 51.8
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 2.6e-28 129.4 168 54.2
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 2.6e-28 129.4 168 54.2
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 4.4e-28 128.6 178 52.8
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 4.4e-28 128.6 169 56.8
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 5.7e-28 128.3 129 61.2
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 5.7e-28 128.3 169 52.7
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 7.5e-28 127.9 168 53.6
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 7.5e-28 127.9 166 54.8
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 7.5e-28 127.9 168 54.2
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 1.3e-27 127.1 135 58.5
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 1.7e-27 126.7 173 54.3
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 2.2e-27 126.3 132 61.4
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 2.8e-27 125.9 168 53.6
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 2.8e-27 125.9 168 53.6
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 4.8e-27 125.2 134 59.0
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 6.3e-27 124.8 175 48.6
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 8.3e-27 124.4 90 75.6
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 1.4e-26 123.6 173 53.2
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 1.4e-26 123.6 175 49.7
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 3.1e-26 122.5 167 50.9
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 4.1e-26 122.1 170 52.9
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 4.1e-26 122.1 170 52.9
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 1.2e-25 120.6 170 52.4
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 2.7e-25 119.4 177 50.3
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 3.5e-25 119.0 169 48.5
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 3.5e-25 119.0 86 74.4
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 4.5e-25 118.6 153 54.9
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 4.5e-25 118.6 153 54.9
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 7.7e-25 117.9 172 50.6
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 3.8e-24 115.5 161 51.6
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 6.5e-24 114.8 86 75.6
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 4.2e-23 112.1 100 67.0
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 3.6e-22 109.0 86 67.4
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 1.4e-21 107.1 97 59.8
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 3.0e-21 105.9 165 46.7
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 4.0e-21 105.5 158 48.7
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 4.0e-21 105.5 91 67.0
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 5.2e-21 105.1 169 45.6
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 5.2e-21 105.1 180 47.8
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 1.5e-20 103.6 175 45.7
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 9.8e-20 100.9 170 47.1
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 2.2e-19 99.8 83 66.3
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 7.0e-18 94.7 87 59.8
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 8.6e-16 87.8 64 75.0
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 7.3e-15 84.7 118 46.6
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 3.4e-12 75.9 80 51.2
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 9.8e-12 74.3 86 51.2
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 1.3e-11 73.9 92 53.3
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 1.3e-11 73.9 90 52.2
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 4.9e-11 72.0 86 48.8


User provided reference genes

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