Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0003570 Simmondsia chinensis HOM05D014687 ORTHO05D010752 1.5e-231 805.8 415 100.0
Sc08g0006150 Simmondsia chinensis HOM05D014687 ORTHO05D010752 6.5e-49 199.1 201 52.2
Sc08g0007420 Simmondsia chinensis HOM05D014687 ORTHO05D010752 4.8e-36 156.4 466 30.0
Sc08g0007400 Simmondsia chinensis HOM05D014687 ORTHO05D010752 9.1e-35 152.1 461 30.4
Sc05g0004700 Simmondsia chinensis HOM05D014687 ORTHO05D010752 6.8e-30 136.0 440 27.7
Sed0004553 Sechium edule HOM05D008906 ORTHO05D010752 1.2e-23 115.2 407 26.0
Lj3A898T32 Lonicera japonica HOM05D008906 ORTHO05D010752 3.0e-22 110.5 406 26.1
Sed0001310 Sechium edule HOM05D008906 ORTHO05D010752 3.0e-22 110.5 407 26.3
ClCG11G000600 Citrullus lanatus HOM05D008906 ORTHO05D010752 4.0e-22 110.2 408 27.0
MD17G1147800 Malus domestica HOM05D008906 ORTHO05D010752 6.8e-22 109.4 404 26.0
ClCG03G011160 Citrullus lanatus HOM05D008906 ORTHO05D010752 1.5e-21 108.2 406 27.1
ClCG03G011130 Citrullus lanatus HOM05D008906 ORTHO05D010752 1.3e-20 105.1 406 26.4
Sc08g0007410 Simmondsia chinensis HOM05D014687 ORTHO05D010752 3.7e-20 103.6 457 26.5
MD09G1162800 Malus domestica HOM05D008906 ORTHO05D010752 1.6e-18 98.2 360 25.0
MELO3C010005.2 Cucumis melo HOM05D008906 ORTHO05D010752 1.7e-17 94.7 405 25.2
CsaV3_1G044120 Cucumis sativus L. HOM05D008906 ORTHO05D010752 6.6e-17 92.8 405 24.7
ClCG03G011150 Citrullus lanatus HOM05D008906 ORTHO05D010752 3.4e-13 80.5 294 24.8
Sc09g0006320 Simmondsia chinensis HOM05D014687 ORTHO05D010752 1.4e-11 75.1 52 69.2
Actinidia30933 Actinidia chinensis HOM05D008906 ORTHO05D010752 1.6e-10 71.6 304 25.7
SGA_v2.0_scaffold163G38045 Striga asiatica HOM05D008906 ORTHO05D010752 1.3e-09 68.6 440 23.2
Sc06g0005950 Simmondsia chinensis HOM05D014687 ORTHO05D010752 3.0e-09 67.4 238 29.4
Ah.14g087260 Amaranthus hybridus HOM05D008906 ORTHO05D010752 1.5e-08 65.1 296 24.0
Ah.14g087280 Amaranthus hybridus HOM05D008906 ORTHO05D010752 2.5e-08 64.3 403 22.1
Os04g0309900 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 1.2e-07 62.0 315 23.8
EL10Ac8g20498 Beta vulgaris HOM05D008906 ORTHO05D010752 2.8e-07 60.8 277 23.8
AUR62036570 Chenopodium quinoa HOM05D008906 ORTHO05D010752 3.6e-07 60.5 273 23.1
Sc09g0006300 Simmondsia chinensis HOM05D014687 ORTHO05D010752 6.2e-07 59.7 171 29.2
AUR62031153 Chenopodium quinoa HOM05D008906 ORTHO05D010752 1.4e-06 58.5 273 23.1
Os04g0308600 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 1.8e-06 58.2 394 22.8
DCAR_016018 Daucus carota HOM05D008906 ORTHO05D010752 4.0e-06 57.0 320 21.2
SGA_v2.0_scaffold11G05641 Striga asiatica HOM05D008906 ORTHO05D010752 4.0e-06 57.0 131 31.3
CSS0023788 Camellia sinensis var. sinensis HOM05D008906 ORTHO05D010752 8.9e-06 55.8 160 29.4
DCAR_016019 Daucus carota HOM05D008906 ORTHO05D010752 8.9e-06 55.8 292 20.9


User provided reference genes

Program Settings