Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 3.1e-170 601.7 297 100.0
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 5.4e-130 468.0 316 74.4
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 4.6e-129 464.9 314 72.9
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 4.6e-129 464.9 314 72.9
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 7.8e-129 464.2 315 72.7
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 3.0e-128 462.2 312 74.7
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 1.1e-127 460.3 314 72.3
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 1.9e-127 459.5 316 73.7
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 7.3e-127 457.6 314 73.6
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 9.5e-127 457.2 315 73.0
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 6.2e-126 454.5 299 74.9
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 8.0e-126 454.1 316 70.9
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 1.5e-124 449.9 299 73.9
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 1.5e-124 449.9 321 72.6
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 2.0e-124 449.5 302 73.5
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 2.0e-124 449.5 357 64.1
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 2.6e-124 449.1 316 72.8
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 4.4e-124 448.4 299 75.6
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 5.8e-124 448.0 314 70.4
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 9.8e-124 447.2 318 71.7
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.7e-123 446.4 356 64.0
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 2.9e-123 445.7 299 73.2
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 3.7e-123 445.3 302 73.2
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 1.4e-122 443.4 299 72.6
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 3.2e-122 442.2 299 72.2
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 5.4e-122 441.4 310 70.3
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 9.2e-122 440.7 311 71.4
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 1.2e-121 440.3 309 71.5
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 1.2e-121 440.3 317 70.0
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 2.7e-121 439.1 299 74.2
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 7.8e-121 437.6 300 72.0
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 1.3e-120 436.8 300 72.0
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 3.9e-120 435.3 316 69.9
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 5.1e-120 434.9 316 70.6
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 1.1e-119 433.7 316 68.7
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 1.9e-119 433.0 316 70.3
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 2.5e-119 432.6 312 69.6
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 2.5e-119 432.6 299 71.9
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 3.3e-119 432.2 302 72.2
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 3.3e-119 432.2 316 69.6
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 4.3e-119 431.8 316 69.9
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 4.3e-119 431.8 301 71.1
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 9.5e-119 430.6 299 71.9
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 9.5e-119 430.6 299 70.6
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 9.5e-119 430.6 299 70.2
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 2.8e-118 429.1 302 71.5
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 2.8e-118 429.1 315 69.2
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 2.8e-118 429.1 316 70.3
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 1.4e-117 426.8 317 69.4
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 1.4e-117 426.8 316 68.7
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 1.8e-117 426.4 317 69.1
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.3e-117 426.0 324 68.5
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.2e-116 423.7 324 68.2
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 1.5e-116 423.3 299 69.2
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 4.4e-116 421.8 301 70.4
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 7.5e-116 421.0 324 67.6
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 1.7e-115 419.9 302 69.9
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 2.2e-115 419.5 299 70.6
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 2.9e-115 419.1 315 67.6
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 4.9e-115 418.3 299 70.9
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 4.9e-115 418.3 302 68.9
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 4.9e-115 418.3 302 69.9
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 6.4e-115 417.9 304 68.8
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 8.3e-115 417.5 315 67.3
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 8.3e-115 417.5 278 75.2
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 1.1e-114 417.2 293 71.7
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 3.2e-114 415.6 302 68.9
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 4.1e-114 415.2 311 68.5
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 1.6e-113 413.3 286 73.1
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 2.3e-112 409.5 334 66.2
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 5.1e-112 408.3 347 63.1
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 9.5e-111 404.1 314 65.3
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 4.7e-110 401.7 286 73.4
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 2.4e-109 399.4 311 66.9
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 6.8e-109 397.9 316 64.6
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 1.5e-108 396.7 278 71.9
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 2.9e-107 392.5 299 67.2
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 2.9e-107 392.5 278 71.9
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 3.8e-107 392.1 338 62.7
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 3.8e-107 392.1 338 62.7
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 9.2e-106 387.5 302 65.6
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 2.7e-105 386.0 278 70.9
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 6.0e-105 384.8 278 70.9
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.0e-104 384.0 319 63.9
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 3.0e-104 382.5 339 62.2
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 6.6e-104 381.3 301 64.1
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 7.3e-103 377.9 266 72.2
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 7.3e-103 377.9 337 59.3
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 9.6e-103 377.5 350 59.1
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 1.2e-102 377.1 262 71.4
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.2e-102 377.1 285 70.9
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 2.8e-102 375.9 285 66.3
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 2.8e-102 375.9 261 72.8
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 3.4e-100 369.0 263 72.2
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 3.4e-100 369.0 211 86.7
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 7.1e-98 361.3 368 53.8
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 2.3e-96 356.3 274 69.3
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 5.1e-96 355.1 310 60.0
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 1.1e-95 354.0 261 69.3
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 3.1e-93 345.9 211 80.6
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 2.9e-91 339.3 260 67.3
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 1.1e-90 337.4 353 54.1
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 1.9e-90 336.7 261 68.2
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 1.2e-89 334.0 306 54.6
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 2.7e-89 332.8 294 59.5
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 6.7e-88 328.2 299 54.8
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 1.3e-83 313.9 305 52.8
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 3.5e-81 305.8 301 52.5
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 2.3e-80 303.1 211 66.8
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 1.9e-79 300.1 220 69.5
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 2.6e-76 289.7 261 61.3
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 1.0e-75 287.7 286 51.0
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 4.2e-74 282.3 238 61.8
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 1.1e-71 274.2 245 60.0
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 1.7e-67 260.4 199 66.3
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 3.6e-65 252.7 221 62.0
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 6.7e-56 221.9 351 39.0
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.5e-50 203.4 143 69.9
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 3.2e-50 203.0 123 80.5
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.5e-47 194.1 160 62.5
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 2.6e-44 183.3 129 69.0
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 4.4e-39 166.0 310 33.5
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 3.2e-34 149.8 97 74.2
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 1.2e-28 131.3 273 34.4
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 5.7e-23 112.5 107 52.3
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 2.9e-19 100.1 97 52.6
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 2.6e-15 87.0 69 58.0
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 1.1e-13 81.6 39 92.3


User provided reference genes

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