Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0003070 Simmondsia chinensis HOM05D004112 ORTHO05D004739 1.2e-253 879.4 451 100.0
Sc26g0001570 Simmondsia chinensis HOM05D004112 ORTHO05D004739 3.3e-22 110.5 345 32.2
EL10Ac6g13879 Beta vulgaris HOM05D004112 ORTHO05D004739 3.1e-20 104.0 305 33.4
AUR62005505 Chenopodium quinoa HOM05D004112 ORTHO05D004739 4.5e-19 100.1 307 32.2
AUR62024236 Chenopodium quinoa HOM05D004112 ORTHO05D004739 3.5e-16 90.5 356 29.2
vmacro01117 Vaccinium macrocarpon HOM05D004112 ORTHO05D004739 6.7e-15 86.3 357 30.3
Rhsim12G0039400 Rhododendron simsii HOM05D004112 ORTHO05D004739 6.3e-13 79.7 356 30.1
TAR622G0947 Trochodendron aralioides HOM05D004112 ORTHO05D004739 6.3e-13 79.7 355 28.2
Hund25400 Selenicereus undatus HOM05D004112 ORTHO05D004739 1.4e-12 78.6 392 28.1
CSS0011275 Camellia sinensis var. sinensis HOM05D004112 ORTHO05D004739 1.8e-12 78.2 398 27.1
Hund06041 Selenicereus undatus HOM05D004112 ORTHO05D004739 1.3e-10 72.0 353 28.6
TWI36G0458 Tripterygium wilfordii HOM05D004112 ORTHO05D004739 3.8e-10 70.5 333 28.8
Nn3g16670 Nelumbo nucifera HOM05D004112 ORTHO05D004739 1.4e-09 68.6 353 28.9
Thecc.02G263400 Theobroma cacao HOM05D004112 ORTHO05D004739 3.2e-09 67.4 390 26.4
Prupe.1G242900 Prunus persica HOM05D004112 ORTHO05D004739 5.5e-09 66.6 388 28.1
MD16G1103100 Malus domestica HOM05D004112 ORTHO05D004739 7.2e-09 66.2 444 25.9
CSS0023851 Camellia sinensis var. sinensis HOM05D004112 ORTHO05D004739 9.4e-09 65.9 359 27.0
Aqoxy3G01258 Aquilegia oxysepala HOM05D004112 ORTHO05D004739 1.6e-08 65.1 319 27.6
FAN07G2897 Fragaria x ananassa HOM05D004112 ORTHO05D004739 2.7e-08 64.3 350 29.4
QL03p056879 Quercus lobata HOM05D004112 ORTHO05D004739 1.0e-07 62.4 353 28.0
Dinv14739 Davidia involucrata HOM05D004112 ORTHO05D004739 1.8e-07 61.6 295 30.2
Potri.008G185100 Populus trichocarpa HOM05D004112 ORTHO05D004739 1.8e-07 61.6 323 29.1
Potri.010G048700 Populus trichocarpa HOM05D004112 ORTHO05D004739 1.8e-07 61.6 322 28.3
FAN17G0775 Fragaria x ananassa HOM05D004112 ORTHO05D004739 3.9e-07 60.5 337 28.8
Sabra10G0020400 Salix brachista HOM05D004112 ORTHO05D004739 5.1e-07 60.1 321 29.0
COL.COLO4_23486 Corchorus olitorius HOM05D004112 ORTHO05D004739 8.8e-07 59.3 348 25.6
Hma1.2p1_0815F.1_g222700 Hydrangea macrophylla HOM05D004112 ORTHO05D004739 1.1e-06 58.9 75 49.3
MD13G1102900 Malus domestica HOM05D004112 ORTHO05D004739 1.1e-06 58.9 392 26.3
TWI18G0097 Tripterygium wilfordii HOM05D004112 ORTHO05D004739 1.5e-06 58.5 356 26.1
RcHm_v2.0_Chr4g0432751 Rosa chinensis HOM05D004112 ORTHO05D004739 2.0e-06 58.2 260 33.5
Gorai.002G188300 Gossypium raimondii HOM05D004112 ORTHO05D004739 4.3e-06 57.0 414 25.1
Ah.02g130260 Amaranthus hybridus HOM05D004112 ORTHO05D004739 5.7e-06 56.6 269 26.4
Gohir.D01G152000 Gossypium hirsutum HOM05D004112 ORTHO05D004739 5.7e-06 56.6 344 26.2
Atru.chr11.2164 Acer truncatum HOM05D004112 ORTHO05D004739 7.4e-06 56.2 358 27.7


User provided reference genes

Program Settings