Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0001000 Simmondsia chinensis HOM05D004666 ORTHO05D005822 0.0e+00 1931.0 984 100.0
Hund26220 Selenicereus undatus HOM05D004666 ORTHO05D005822 2.4e-206 723.4 1016 42.0
EL10Ac7g16949 Beta vulgaris HOM05D004666 ORTHO05D005822 1.7e-204 717.2 1007 42.9
COL.COLO4_15658 Corchorus olitorius HOM05D004666 ORTHO05D005822 3.9e-193 679.5 1011 42.3
Dinv21227 Davidia involucrata HOM05D004666 ORTHO05D005822 3.4e-189 666.4 992 39.8
AUR62033523 Chenopodium quinoa HOM05D004666 ORTHO05D005822 2.4e-182 643.7 1028 39.8
Ah.08g210700 Amaranthus hybridus HOM05D004666 ORTHO05D005822 2.2e-180 637.1 1025 39.7
FvH4_6g18260 Fragaria vesca HOM05D004666 ORTHO05D005822 1.6e-178 630.9 1039 41.1
vmacro17219 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 1.6e-178 630.9 1002 41.1
CiPaw.09G011000 Carya illinoinensis HOM05D004666 ORTHO05D005822 1.8e-177 627.5 1002 39.9
RcHm_v2.0_Chr4g0409331 Rosa chinensis HOM05D004666 ORTHO05D005822 1.1e-176 624.8 1046 41.6
Rhsim05G0022800 Rhododendron simsii HOM05D004666 ORTHO05D005822 2.8e-175 620.2 1004 39.3
vmacro22687 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 1.2e-173 614.8 1002 39.6
PSO384G1605 Papaver somniferum HOM05D004666 ORTHO05D005822 5.9e-173 612.5 1013 39.4
QL07p039593 Quercus lobata HOM05D004666 ORTHO05D005822 2.9e-172 610.1 1004 40.6
PSO425G0050 Papaver somniferum HOM05D004666 ORTHO05D005822 3.8e-172 609.8 1002 38.7
Cfa002067 Carpinus fangiana HOM05D004666 ORTHO05D005822 5.0e-172 609.4 1006 39.6
TAR365G1212 Trochodendron aralioides HOM05D004666 ORTHO05D005822 8.5e-172 608.6 997 39.0
Thecc.01G223300 Theobroma cacao HOM05D004666 ORTHO05D005822 1.6e-170 604.4 1009 39.1
GSVIVG01032069001 Vitis vinifera HOM05D004666 ORTHO05D005822 8.7e-169 598.6 996 37.9
Cc06_g05530 Coffea canephora HOM05D004666 ORTHO05D005822 1.4e-166 591.3 988 40.8
Gohir.A07G200500 Gossypium hirsutum HOM05D004666 ORTHO05D005822 1.1e-163 581.6 1039 36.2
Phvul.011G176600 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 2.5e-163 580.5 1003 40.7
Lalb_Chr02g0155381 Lupinus albus HOM05D004666 ORTHO05D005822 3.2e-163 580.1 1004 36.8
Gorai.001G233200 Gossypium raimondii HOM05D004666 ORTHO05D005822 4.2e-163 579.7 1039 35.5
RcHm_v2.0_Chr3g0472691 Rosa chinensis HOM05D004666 ORTHO05D005822 1.1e-160 571.6 527 54.5
CANSAT54G2995 Cannabis sativa HOM05D004666 ORTHO05D005822 3.7e-159 566.6 992 36.5
Nitab4.5_0000794g0050 Nicotiana tabacum HOM05D004666 ORTHO05D005822 3.1e-158 563.5 984 37.3
Lj2C133G10 Lonicera japonica HOM05D004666 ORTHO05D005822 5.3e-158 562.8 987 38.4
Manes.13G012000 Manihot esculenta HOM05D004666 ORTHO05D005822 6.9e-158 562.4 1029 38.3
TWI34G1071 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 1.2e-157 561.6 1009 38.2
Potri.008G200900 Populus trichocarpa HOM05D004666 ORTHO05D005822 1.5e-157 561.2 989 38.0
Gohir.D07G206800 Gossypium hirsutum HOM05D004666 ORTHO05D005822 1.7e-156 557.8 1039 35.4
Glyma.10G068100 Glycine max HOM05D004666 ORTHO05D005822 2.7e-154 550.4 1035 39.0
Aqoxy3G00997 Aquilegia oxysepala HOM05D004666 ORTHO05D005822 3.6e-154 550.1 990 36.2
Ca_26672_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 6.1e-154 549.3 1015 35.7
Ca_30723_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 6.1e-154 549.3 1015 35.7
Oeu040521.1 Olea europaea HOM05D004666 ORTHO05D005822 6.1e-154 549.3 994 38.5
FvH4_7g02500 Fragaria vesca HOM05D004666 ORTHO05D005822 8.2e-151 538.9 1069 34.6
MELO3C009457.2 Cucumis melo HOM05D004666 ORTHO05D005822 2.4e-150 537.3 582 46.9
Sed0022470 Sechium edule HOM05D004666 ORTHO05D005822 2.4e-150 537.3 1015 36.8
TPR.G35431 Trifolium pratense HOM05D004666 ORTHO05D005822 2.6e-149 533.9 997 35.0
ECA248G3102 Erigeron canadensis HOM05D004666 ORTHO05D005822 3.5e-149 533.5 1007 37.4
Lj5g0013478 Lotus japonicus HOM05D004666 ORTHO05D005822 2.9e-148 530.4 1008 37.6
CsaV3_3G037120 Cucumis sativus L. HOM05D004666 ORTHO05D005822 5.0e-148 529.6 1014 33.1
MD09G1081300 Malus domestica HOM05D004666 ORTHO05D005822 6.5e-148 529.3 1035 36.8
VMungo0720G2175 Vigna mungo HOM05D004666 ORTHO05D005822 8.5e-148 528.9 1061 38.4
Phvul.007G229800 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 2.7e-146 523.9 1029 36.1
Prupe.7G114200 Prunus persica HOM05D004666 ORTHO05D005822 1.4e-145 521.5 1122 34.8
THA.LOC104827512 Tarenaya hassleriana HOM05D004666 ORTHO05D005822 6.7e-145 519.2 996 34.6
AUR62028568 Chenopodium quinoa HOM05D004666 ORTHO05D005822 8.8e-145 518.8 591 47.9
Sp1g17360 Schrenkiella parvula HOM05D004666 ORTHO05D005822 8.8e-145 518.8 987 35.4
A08p29790 Brassica napus HOM05D004666 ORTHO05D005822 1.5e-144 518.1 998 35.7
FAN06G2408 Fragaria x ananassa HOM05D004666 ORTHO05D005822 2.6e-144 517.3 1046 38.0
AL1G32230 Arabidopsis lyrata HOM05D004666 ORTHO05D005822 3.3e-144 516.9 990 36.0
BolC8t49572H Brassica oleracea HOM05D004666 ORTHO05D005822 5.7e-144 516.2 993 35.5
Haze_19573 Corylus avellana HOM05D004666 ORTHO05D005822 5.7e-144 516.2 653 45.3
Nitab4.5_0009916g0020 Nicotiana tabacum HOM05D004666 ORTHO05D005822 5.7e-144 516.2 957 37.3
ECA248G2596 Erigeron canadensis HOM05D004666 ORTHO05D005822 1.3e-143 515.0 1035 35.7
BraA08t34913Z Brassica rapa HOM05D004666 ORTHO05D005822 2.8e-143 513.8 997 35.5
Atru.chr8.1588 Acer truncatum HOM05D004666 ORTHO05D005822 6.3e-143 512.7 849 38.5
C08p19490 Brassica napus HOM05D004666 ORTHO05D005822 8.2e-143 512.3 994 35.6
Sed0014063 Sechium edule HOM05D004666 ORTHO05D005822 1.8e-142 511.1 558 47.3
Ciclev10011197m.g Citrus clementina HOM05D004666 ORTHO05D005822 1.2e-141 508.4 802 40.6
Thhalv10006802m.g Eutrema salsugineum HOM05D004666 ORTHO05D005822 5.9e-141 506.1 997 35.0
Medtr1g060580 Medicago truncatula HOM05D004666 ORTHO05D005822 7.7e-141 505.8 1005 33.8
BcaB03g12912 Brassica carinata HOM05D004666 ORTHO05D005822 1.3e-140 505.0 492 52.0
HanXRQChr01g0029141 Helianthus annuus HOM05D004666 ORTHO05D005822 2.9e-140 503.8 456 54.8
ClCG10G019140 Citrullus lanatus HOM05D004666 ORTHO05D005822 3.8e-140 503.4 1003 34.9
arahy.Tifrunner.gnm1.ann1.G8H5C8 Arachis hypogaea HOM05D004666 ORTHO05D005822 5.0e-140 503.1 1012 34.1
PGR142G0825 Punica granatum HOM05D004666 ORTHO05D005822 1.1e-139 501.9 991 36.7
AT1G19485 Arabidopsis thaliana HOM05D004666 ORTHO05D005822 7.2e-139 499.2 994 34.8
Psat6g082920 Pisum sativum HOM05D004666 ORTHO05D005822 1.2e-138 498.4 997 34.5
Lsat_1_v5_gn_1_48480 Lactuca sativa HOM05D004666 ORTHO05D005822 2.7e-138 497.3 611 44.5
Carub.0001s1905 Capsella rubella HOM05D004666 ORTHO05D005822 3.6e-138 496.9 990 35.7
C05p17890 Brassica napus HOM05D004666 ORTHO05D005822 1.0e-137 495.4 550 46.9
FAN03G3209 Fragaria x ananassa HOM05D004666 ORTHO05D005822 5.2e-137 493.0 1069 37.2
BolC5t30496H Brassica oleracea HOM05D004666 ORTHO05D005822 6.8e-137 492.7 552 47.6
MD12G1022600 Malus domestica HOM05D004666 ORTHO05D005822 6.8e-137 492.7 1041 33.3
arahy.Tifrunner.gnm1.ann1.WFL2XE Arachis hypogaea HOM05D004666 ORTHO05D005822 2.6e-136 490.7 986 33.9
A06p15660 Brassica napus HOM05D004666 ORTHO05D005822 5.7e-136 489.6 543 47.7
BraA06t24675Z Brassica rapa HOM05D004666 ORTHO05D005822 5.7e-136 489.6 543 47.7
DCAR_013376 Daucus carota HOM05D004666 ORTHO05D005822 3.7e-135 486.9 991 35.6
CARHR020050 Cardamine hirsuta HOM05D004666 ORTHO05D005822 1.4e-134 485.0 549 46.3
arahy.Tifrunner.gnm1.ann1.T4KAXF Arachis hypogaea HOM05D004666 ORTHO05D005822 4.1e-134 483.4 1013 33.5
Sopen09g004490 Solanum pennellii HOM05D004666 ORTHO05D005822 9.1e-134 482.3 981 33.7
Aa31LG7G4140 Aethionema arabicum HOM05D004666 ORTHO05D005822 2.7e-133 480.7 477 51.6
Solyc09g009710.4 Solanum lycopersicum HOM05D004666 ORTHO05D005822 7.7e-133 479.2 981 33.5
Migut.J00966 Erythranthe guttata HOM05D004666 ORTHO05D005822 7.2e-131 472.6 971 34.5
TWI73G1120 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 1.2e-130 471.9 993 36.0
HPP92_015079 Vanilla planifolia HOM05D004666 ORTHO05D005822 1.2e-130 471.9 1086 32.4
Peaxi162Scf00015g00639 Petunia axillaris HOM05D004666 ORTHO05D005822 1.6e-130 471.5 997 36.4
FAN02G3237 Fragaria x ananassa HOM05D004666 ORTHO05D005822 3.6e-130 470.3 800 39.8
Lj5g0018797 Lotus japonicus HOM05D004666 ORTHO05D005822 3.7e-127 460.3 997 33.0
Potri.006G036601 Populus trichocarpa HOM05D004666 ORTHO05D005822 2.3e-121 441.0 476 49.6
arahy.Tifrunner.gnm1.ann1.LSN657 Arachis hypogaea HOM05D004666 ORTHO05D005822 4.0e-121 440.3 988 32.6
Zm00001eb147330 Zea mays HOM05D004666 ORTHO05D005822 4.1e-118 430.3 561 41.0
MBI17_g35786_MAGBIO Magnolia biondii HOM05D004666 ORTHO05D005822 4.6e-117 426.8 505 46.3
Peaxi162Scf00036g00125 Petunia axillaris HOM05D004666 ORTHO05D005822 1.7e-116 424.9 1026 33.7
SalBow3G3865 Salvia bowleyana HOM05D004666 ORTHO05D005822 3.0e-116 424.1 996 32.3
SGA_v2.0_scaffold147G36363 Striga asiatica HOM05D004666 ORTHO05D005822 2.5e-115 421.0 973 34.4
FAN05G5602 Fragaria x ananassa HOM05D004666 ORTHO05D005822 5.2e-113 413.3 820 38.3
Eucgr.K02035 Eucalyptus grandis HOM05D004666 ORTHO05D005822 2.1e-106 391.3 369 52.8
CDE08G1659 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 6.2e-106 389.8 524 40.1
Os01g0858000 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 5.4e-102 376.7 426 44.4
Nn2g14084 Nelumbo nucifera HOM05D004666 ORTHO05D005822 7.1e-102 376.3 766 38.4
Duzib114G0569 Durio zibethinus HOM05D004666 ORTHO05D005822 2.4e-94 351.3 536 39.7
AagrBONN_evm.TU.Sc2ySwM_344.3422 Anthoceros agrestis HOM05D004666 ORTHO05D005822 4.1e-94 350.5 535 38.3
unitig_749.g14294 Utricularia gibba HOM05D004666 ORTHO05D005822 7.1e-94 349.7 430 42.1
Pp3c1_31470 Physcomitrium patens HOM05D004666 ORTHO05D005822 9.2e-94 349.4 478 39.7
Mapoly0021s0027 Marchantia polymorpha HOM05D004666 ORTHO05D005822 4.3e-91 340.5 481 37.4
Cpa.g.sc5.49 Carica papaya HOM05D004666 ORTHO05D005822 4.0e-89 334.0 322 53.1
Sabra08G0160300 Salix brachista HOM05D004666 ORTHO05D005822 7.4e-75 286.6 704 33.1
Hma1.2p1_2087F.1_g313760 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 1.8e-73 282.0 292 50.3
Sabra12G0045300 Salix brachista HOM05D004666 ORTHO05D005822 2.4e-70 271.6 741 31.7
ATR0820G266 Amborella trichopoda HOM05D004666 ORTHO05D005822 2.2e-58 231.9 287 44.3
Haze_16425 Corylus avellana HOM05D004666 ORTHO05D005822 4.2e-54 217.6 298 45.3
CBR_g38478 Chara braunii HOM05D004666 ORTHO05D005822 2.8e-50 204.9 264 41.3
RhsimUnG0189100 Rhododendron simsii HOM05D004666 ORTHO05D005822 6.9e-49 200.3 218 49.1
SEGI_09998 Sequoiadendron giganteum HOM05D004666 ORTHO05D005822 3.9e-44 184.5 131 67.2
Hma1.2p1_0084F.1_g043480 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 3.5e-40 171.4 207 44.9
FAN14G5421 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.2e-37 162.9 242 43.4
FAN05G4874 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.1e-35 156.4 153 47.7
Hma1.2p1_2087F.1_g313780 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 1.3e-34 152.9 283 35.7
Eucgr.L02043 Eucalyptus grandis HOM05D004666 ORTHO05D005822 4.1e-33 147.9 211 42.7
QL03p004438 Quercus lobata HOM05D004666 ORTHO05D005822 2.6e-32 145.2 101 64.4
PGSC0003DMG400008959 Solanum tuberosum HOM05D004666 ORTHO05D005822 2.9e-31 141.7 623 24.4
SEGI_32780 Sequoiadendron giganteum HOM05D004666 ORTHO05D005822 7.2e-30 137.1 208 38.5
ATR0820G291 Amborella trichopoda HOM05D004666 ORTHO05D005822 3.0e-28 131.7 189 38.1
Hma1.2p1_0084F.1_g043490 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 2.2e-26 125.6 113 54.0
QL03p004414 Quercus lobata HOM05D004666 ORTHO05D005822 3.7e-26 124.8 117 54.7
SHI23868 Sapria himalayana HOM05D004666 ORTHO05D005822 1.8e-25 122.5 201 40.3
Rhsim09G0020300 Rhododendron simsii HOM05D004666 ORTHO05D005822 5.9e-24 117.5 256 32.4
Cpa.g.c36918 Carica papaya HOM05D004666 ORTHO05D005822 1.5e-22 112.8 275 40.0
Hma1.2p1_0084F.1_g043500 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 2.5e-22 112.1 546 24.7
CDE08G0815 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 4.7e-21 107.8 181 35.9
FAN09G1276 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.0e-20 106.7 121 46.3
RcHm_v2.0_Chr3g0472701 Rosa chinensis HOM05D004666 ORTHO05D005822 4.0e-20 104.8 121 46.3
Sabra06G0024800 Salix brachista HOM05D004666 ORTHO05D005822 1.3e-18 99.8 188 35.6
CSS0049785 Camellia sinensis var. sinensis HOM05D004666 ORTHO05D005822 8.3e-18 97.1 110 47.3
FAN10G4251 Fragaria x ananassa HOM05D004666 ORTHO05D005822 7.7e-16 90.5 649 27.6
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 2.3e-15 89.0 61 55.7
Os02g0307300 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 1.9e-14 85.9 183 33.9
RcHm_v2.0_Chr7g0223981 Rosa chinensis HOM05D004666 ORTHO05D005822 7.8e-08 63.9 51 52.9
Lj3A890T55 Lonicera japonica HOM05D000526 ORTHO05D000956 2.5e-06 58.9 175 24.0


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