Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc02g0000780 Simmondsia chinensis HOM05D007193 ORTHO05D008972 5.8e-68 260.8 132 100.0
Hund03753 Selenicereus undatus HOM05D007193 ORTHO05D008972 2.6e-36 155.6 129 57.4
EL10Ac7g17043 Beta vulgaris HOM05D007193 ORTHO05D008972 1.0e-35 153.7 131 53.4
AUR62006334 Chenopodium quinoa HOM05D007193 ORTHO05D008972 3.6e-33 145.2 127 52.8
Prupe.6G289100 Prunus persica HOM05D007193 ORTHO05D008972 6.1e-33 144.4 124 57.3
Ah.08g209780 Amaranthus hybridus HOM05D007193 ORTHO05D008972 3.0e-32 142.1 124 53.2
Prupe.4G286300 Prunus persica HOM05D007193 ORTHO05D008972 4.3e-31 138.3 123 56.1
Cfa017069 Carpinus fangiana HOM05D007193 ORTHO05D008972 4.8e-30 134.8 123 53.7
Duzib151G0002 Durio zibethinus HOM05D007193 ORTHO05D008972 4.8e-30 134.8 123 53.7
GSVIVG01030223001 Vitis vinifera HOM05D007193 ORTHO05D008972 4.8e-30 134.8 132 52.3
COL.COLO4_36102 Corchorus olitorius HOM05D007193 ORTHO05D008972 6.3e-30 134.4 123 54.5
CiPaw.09G217600 Carya illinoinensis HOM05D007193 ORTHO05D008972 1.1e-29 133.7 123 54.5
Haze_21127 Corylus avellana HOM05D007193 ORTHO05D008972 1.1e-29 133.7 125 52.0
Potri.016G132500 Populus trichocarpa HOM05D007193 ORTHO05D008972 9.1e-29 130.6 124 49.2
Eucgr.A00654 Eucalyptus grandis HOM05D007193 ORTHO05D008972 3.4e-28 128.6 132 50.0
Ciclev10011631m.g Citrus clementina HOM05D007193 ORTHO05D008972 2.2e-27 125.9 125 51.2
ClCG10G022600 Citrullus lanatus HOM05D007193 ORTHO05D008972 3.8e-27 125.2 127 48.8
Gohir.A02G005200 Gossypium hirsutum HOM05D007193 ORTHO05D008972 3.8e-27 125.2 131 46.6
Gohir.D02G005600 Gossypium hirsutum HOM05D007193 ORTHO05D008972 3.8e-27 125.2 131 45.8
Dinv11397 Davidia involucrata HOM05D007193 ORTHO05D008972 5.0e-27 124.8 128 49.2
Duzib212G0445 Durio zibethinus HOM05D007193 ORTHO05D008972 6.5e-27 124.4 123 49.6
Gorai.005G006400 Gossypium raimondii HOM05D007193 ORTHO05D008972 6.5e-27 124.4 131 45.8
VMungo1383G2109 Vigna mungo HOM05D007193 ORTHO05D008972 1.1e-26 123.6 131 46.6
PGR031G3803 Punica granatum HOM05D007193 ORTHO05D008972 1.9e-26 122.9 127 46.5
Glyma.18G210600 Glycine max HOM05D007193 ORTHO05D008972 2.5e-26 122.5 131 47.3
Phvul.008G087300 Phaseolus vulgaris HOM05D007193 ORTHO05D008972 2.5e-26 122.5 131 45.8
RcHm_v2.0_Chr3g0461371 Rosa chinensis HOM05D007193 ORTHO05D008972 3.2e-26 122.1 126 50.0
FAN05G1003 Fragaria x ananassa HOM05D007193 ORTHO05D008972 9.4e-26 120.6 126 50.8
CsaV3_3G033230 Cucumis sativus L. HOM05D007193 ORTHO05D008972 1.2e-25 120.2 124 50.8
Glyma.09G278200 Glycine max HOM05D007193 ORTHO05D008972 1.2e-25 120.2 121 48.8
Glyma.19G111900 Glycine max HOM05D007193 ORTHO05D008972 1.2e-25 120.2 133 48.1
Manes.09G115100 Manihot esculenta HOM05D007193 ORTHO05D008972 1.2e-25 120.2 123 49.6
MD12G1184300 Malus domestica HOM05D007193 ORTHO05D008972 2.7e-25 119.0 127 50.4
Peaxi162Scf00732g00443 Petunia axillaris HOM05D007193 ORTHO05D008972 2.7e-25 119.0 131 48.1
FvH4_6g10470 Fragaria vesca HOM05D007193 ORTHO05D008972 3.6e-25 118.6 126 50.0
FAN02G2621 Fragaria x ananassa HOM05D007193 ORTHO05D008972 3.6e-25 118.6 126 50.0
FAN14G4175 Fragaria x ananassa HOM05D007193 ORTHO05D008972 3.6e-25 118.6 126 50.0
MD04G1170300 Malus domestica HOM05D007193 ORTHO05D008972 3.6e-25 118.6 133 48.1
Sabra04G0150400 Salix brachista HOM05D007193 ORTHO05D008972 3.6e-25 118.6 118 46.6
Atru.chr8.2367 Acer truncatum HOM05D007193 ORTHO05D008972 4.7e-25 118.2 113 54.0
Gohir.A09G213630 Gossypium hirsutum HOM05D007193 ORTHO05D008972 4.7e-25 118.2 122 48.4
Hma1.2p1_0174F.1_g077020 Hydrangea macrophylla HOM05D007193 ORTHO05D008972 4.7e-25 118.2 133 45.9
CSS0011076 Camellia sinensis var. sinensis HOM05D007193 ORTHO05D008972 6.1e-25 117.9 134 47.8
CSS0034035 Camellia sinensis var. sinensis HOM05D007193 ORTHO05D008972 7.9e-25 117.5 134 47.8
Gorai.006G233700 Gossypium raimondii HOM05D007193 ORTHO05D008972 3.0e-24 115.5 123 49.6
MELO3C009116.2 Cucumis melo HOM05D007193 ORTHO05D008972 5.1e-24 114.8 125 47.2
Nitab4.5_0012389g0010 Nicotiana tabacum HOM05D007193 ORTHO05D008972 5.1e-24 114.8 131 48.1
Rhsim04G0123100 Rhododendron simsii HOM05D007193 ORTHO05D008972 5.1e-24 114.8 128 46.1
Medtr7g072460 Medicago truncatula HOM05D007193 ORTHO05D008972 6.7e-24 114.4 128 46.9
TPR.G30994 Trifolium pratense HOM05D007193 ORTHO05D008972 6.7e-24 114.4 128 44.5
TWI53G1230 Tripterygium wilfordii HOM05D007193 ORTHO05D008972 1.1e-23 113.6 121 48.8
Nitab4.5_0000454g0040 Nicotiana tabacum HOM05D007193 ORTHO05D008972 1.5e-23 113.2 131 48.1
SGA_v2.0_scaffold85G26656 Striga asiatica HOM05D007193 ORTHO05D008972 1.5e-23 113.2 126 50.8
Sopen09g011740 Solanum pennellii HOM05D007193 ORTHO05D008972 2.0e-23 112.8 128 45.3
PGSC0003DMG400017034 Solanum tuberosum HOM05D007193 ORTHO05D008972 2.0e-23 112.8 128 45.3
Cc02_g36290 Coffea canephora HOM05D007193 ORTHO05D008972 3.3e-23 112.1 126 47.6
QL07p033223 Quercus lobata HOM05D007193 ORTHO05D008972 3.3e-23 112.1 123 45.5
Sed0019502 Sechium edule HOM05D007193 ORTHO05D008972 4.4e-23 111.7 127 47.2
Solyc09g018490.4 Solanum lycopersicum HOM05D007193 ORTHO05D008972 4.4e-23 111.7 128 44.5
CAN.G475.6 Capsicum annuum HOM05D007193 ORTHO05D008972 5.7e-23 111.3 133 47.4
Cpa.g.sc33.101 Carica papaya HOM05D007193 ORTHO05D008972 9.7e-23 110.5 102 52.9
arahy.Tifrunner.gnm1.ann1.N3F1SH Arachis hypogaea HOM05D007193 ORTHO05D008972 1.3e-22 110.2 124 43.5
arahy.Tifrunner.gnm1.ann1.Y4LGN2 Arachis hypogaea HOM05D007193 ORTHO05D008972 1.7e-22 109.8 125 43.2
Lalb_Chr01g0023631 Lupinus albus HOM05D007193 ORTHO05D008972 4.8e-22 108.2 119 48.7
Gohir.D09G213500 Gossypium hirsutum HOM05D007193 ORTHO05D008972 6.3e-22 107.8 114 50.9
Oeu057644.3 Olea europaea HOM05D007193 ORTHO05D008972 6.3e-22 107.8 126 42.9
Psat3g122120 Pisum sativum HOM05D007193 ORTHO05D008972 6.3e-22 107.8 121 43.0
Aqoxy4G02155 Aquilegia oxysepala HOM05D007193 ORTHO05D008972 8.2e-22 107.5 126 45.2
DCAR_028906 Daucus carota HOM05D007193 ORTHO05D008972 8.2e-22 107.5 123 42.3
FAN09G4509 Fragaria x ananassa HOM05D007193 ORTHO05D008972 8.2e-22 107.5 116 50.0
Nn2g11074 Nelumbo nucifera HOM05D007193 ORTHO05D008972 8.2e-22 107.5 126 45.2
Lj1g0001931 Lotus japonicus HOM05D007193 ORTHO05D008972 1.4e-21 106.7 121 44.6
CANSAT35G0173 Cannabis sativa HOM05D007193 ORTHO05D008972 1.8e-21 106.3 133 45.1
TAR633G0507 Trochodendron aralioides HOM05D007193 ORTHO05D008972 2.4e-21 105.9 126 46.0
Ca_07743_v3 Cicer arietinum L. HOM05D007193 ORTHO05D008972 3.1e-21 105.5 121 41.3
CARHR161320 Cardamine hirsuta HOM05D007193 ORTHO05D008972 4.1e-21 105.1 123 43.9
CAN.G940.17 Capsicum annuum HOM05D007193 ORTHO05D008972 5.3e-21 104.8 128 46.9
AL5G32160 Arabidopsis lyrata HOM05D007193 ORTHO05D008972 1.2e-20 103.6 123 43.1
BcaC06g33003 Brassica carinata HOM05D007193 ORTHO05D008972 5.9e-20 101.3 120 42.5
Aa31sc223G10 Aethionema arabicum HOM05D007193 ORTHO05D008972 1.3e-19 100.1 127 39.4
THA.LOC104806626 Tarenaya hassleriana HOM05D007193 ORTHO05D008972 2.2e-19 99.4 125 41.6
AT3G51710 Arabidopsis thaliana HOM05D007193 ORTHO05D008972 2.9e-19 99.0 116 41.4
A03p48460 Brassica napus HOM05D007193 ORTHO05D008972 1.1e-18 97.1 115 40.9
BraA03t13951Z Brassica rapa HOM05D007193 ORTHO05D008972 1.1e-18 97.1 115 40.9
AUR62026371 Chenopodium quinoa HOM05D007193 ORTHO05D008972 4.2e-18 95.1 92 52.2
Lj2A63T42 Lonicera japonica HOM05D007193 ORTHO05D008972 5.5e-18 94.7 110 47.3
HanXRQChr10g0286401 Helianthus annuus HOM05D007193 ORTHO05D008972 1.6e-17 93.2 129 38.8
Carub.0005s1805 Capsella rubella HOM05D007193 ORTHO05D008972 3.6e-17 92.0 113 44.2
Sp5g10570 Schrenkiella parvula HOM05D007193 ORTHO05D008972 4.7e-17 91.7 112 40.2
Migut.J00070 Erythranthe guttata HOM05D007193 ORTHO05D008972 6.1e-17 91.3 132 43.2
BcaC06g33345 Brassica carinata HOM05D007193 ORTHO05D008972 1.4e-16 90.1 112 40.2
C07p46550 Brassica napus HOM05D007193 ORTHO05D008972 1.4e-16 90.1 112 40.2
Lsat_1_v5_gn_9_38080 Lactuca sativa HOM05D007193 ORTHO05D008972 3.9e-16 88.6 124 44.4
MBI14_g13641_MAGBIO Magnolia biondii HOM05D007193 ORTHO05D008972 5.2e-16 88.2 131 38.9
PSO170G5706 Papaver somniferum HOM05D007193 ORTHO05D008972 2.6e-15 85.9 135 39.3
vmacro08932 Vaccinium macrocarpon HOM05D007193 ORTHO05D008972 5.3e-13 78.2 85 49.4
Thhalv10010348m.g Eutrema salsugineum HOM05D007193 ORTHO05D008972 5.5e-10 68.2 107 39.3
Actinidia32557 Actinidia chinensis HOM05D007193 ORTHO05D008972 9.4e-10 67.4 67 52.2
PSO017G7058 Papaver somniferum HOM05D007193 ORTHO05D008972 4.7e-09 65.1 110 36.4
THA.LOC104806964 Tarenaya hassleriana HOM05D007193 ORTHO05D008972 2.6e-07 59.3 65 44.6
Manes.08G172801 Manihot esculenta HOM05D007193 ORTHO05D008972 1.7e-06 56.6 66 47.0


User provided reference genes

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