Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 8.7e-168 593.6 304 100.0
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 5.0e-139 498.0 304 82.9
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 2.4e-133 479.2 304 79.6
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 1.2e-132 476.9 304 79.6
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 7.7e-132 474.2 304 79.3
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.3e-131 473.4 304 78.3
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 1.3e-131 473.4 304 78.9
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 2.9e-131 472.2 304 78.3
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 2.9e-131 472.2 304 78.0
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 1.1e-130 470.3 304 78.6
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 1.1e-130 470.3 298 78.9
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 7.2e-130 467.6 303 77.9
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 3.6e-129 465.3 304 77.3
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 4.7e-129 464.9 304 76.0
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 4.7e-129 464.9 304 76.0
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 8.0e-129 464.2 298 77.2
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 1.0e-128 463.8 304 76.3
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 1.0e-128 463.8 304 76.3
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 1.4e-128 463.4 298 77.9
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 1.4e-128 463.4 304 75.7
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 1.8e-128 463.0 298 78.5
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.8e-128 463.0 304 75.3
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 2.3e-128 462.6 304 75.3
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 3.0e-128 462.2 298 78.5
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 5.2e-128 461.5 304 75.3
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 5.2e-128 461.5 304 77.3
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.1e-127 460.3 304 75.3
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 1.5e-127 459.9 298 78.2
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.0e-127 459.5 304 76.3
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 3.3e-127 458.8 298 75.8
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 4.4e-127 458.4 302 76.5
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 4.4e-127 458.4 298 77.5
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 4.4e-127 458.4 304 74.7
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 9.7e-127 457.2 304 75.0
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 1.3e-126 456.8 304 75.7
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 1.3e-126 456.8 304 74.3
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 2.8e-126 455.7 298 77.5
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 2.8e-126 455.7 304 74.7
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 3.7e-126 455.3 304 75.0
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 3.7e-126 455.3 304 73.7
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 4.8e-126 454.9 298 76.8
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 6.3e-126 454.5 297 78.1
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 6.3e-126 454.5 304 74.0
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 8.2e-126 454.1 304 75.3
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 8.2e-126 454.1 304 74.3
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 1.1e-125 453.8 304 73.7
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.8e-125 453.0 298 77.2
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 3.1e-125 452.2 304 75.0
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 3.1e-125 452.2 298 77.5
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 4.1e-125 451.8 306 75.8
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 5.3e-125 451.4 304 75.0
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 1.3e-123 446.8 304 73.7
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 2.9e-123 445.7 306 74.2
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 2.9e-123 445.7 306 74.2
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 2.9e-123 445.7 304 74.0
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 3.8e-123 445.3 306 74.2
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 3.8e-123 445.3 298 75.2
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 6.5e-123 444.5 306 73.9
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 8.5e-123 444.1 304 73.0
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 2.5e-122 442.6 304 72.4
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 2.5e-122 442.6 304 73.0
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 3.2e-122 442.2 306 73.5
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 3.2e-122 442.2 306 73.5
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 3.2e-122 442.2 304 73.7
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 4.2e-122 441.8 304 73.0
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 9.4e-122 440.7 300 74.7
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 9.4e-122 440.7 304 73.0
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 1.6e-121 439.9 300 74.0
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 1.6e-121 439.9 306 74.5
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 2.1e-121 439.5 300 75.3
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 3.6e-121 438.7 304 74.0
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 4.7e-121 438.3 304 72.4
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 1.0e-120 437.2 300 74.3
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 1.0e-120 437.2 304 72.7
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 2.3e-120 436.0 300 75.0
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 2.3e-120 436.0 304 72.0
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 5.2e-120 434.9 304 73.0
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 8.8e-120 434.1 299 74.9
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.5e-119 433.3 304 73.7
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 3.4e-119 432.2 300 74.3
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 4.8e-118 428.3 278 78.8
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 5.0e-115 418.3 301 68.8
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 4.0e-112 408.7 283 73.5
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 5.2e-112 408.3 295 69.2
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 1.5e-111 406.8 298 68.5
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 1.4e-109 400.2 304 67.4
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 2.7e-108 396.0 298 66.8
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 1.7e-107 393.3 301 67.8
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 3.8e-107 392.1 262 75.6
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 1.8e-104 383.3 270 71.5
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 6.3e-102 374.8 246 79.3
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 4.1e-101 372.1 248 77.0
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 9.5e-98 360.9 266 69.2
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 3.6e-97 359.0 230 80.0
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 4.7e-97 358.6 305 62.0
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 1.8e-88 330.1 302 58.6
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 2.3e-88 329.7 289 60.6
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 2.0e-87 326.6 304 56.6
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 2.2e-86 323.2 262 63.4
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 1.0e-83 314.3 253 63.6
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 1.6e-81 307.0 295 57.6
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 6.8e-80 301.6 218 70.2
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.2e-77 292.7 196 74.5
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 1.3e-75 287.3 297 52.9
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.5e-74 283.9 298 55.0
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 1.6e-68 263.8 194 67.0
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 1.9e-66 256.9 312 45.8
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 6.9e-64 248.4 215 63.3
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 8.1e-49 198.4 303 43.6
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.4e-48 197.6 143 73.4
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.8e-48 197.2 144 74.3
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 2.0e-47 193.7 315 39.7
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.3e-46 191.0 144 71.5
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 7.1e-45 185.3 165 55.2
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 9.6e-42 174.9 114 76.3
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.7e-41 172.9 144 68.8
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 3.2e-37 159.8 315 35.6
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 1.6e-36 157.5 362 31.5
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 4.3e-34 149.4 91 74.7
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 4.5e-31 139.4 265 40.0
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 4.2e-29 132.9 336 30.7
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 2.3e-27 127.1 76 78.9
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 5.0e-14 82.8 43 86.0


User provided reference genes

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