Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 2.3e-135 485.7 269 100.0
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 5.5e-65 251.9 244 64.8
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 7.4e-62 241.5 271 57.6
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 3.1e-60 236.1 236 59.3
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 4.1e-60 235.7 235 63.0
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 5.9e-59 231.9 261 55.6
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 1.0e-58 231.1 240 58.8
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 5.5e-57 225.3 240 55.0
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 3.6e-56 222.6 241 56.0
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 6.1e-56 221.9 216 63.9
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.8e-55 220.3 240 56.7
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 3.0e-55 219.5 231 60.6
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 3.9e-55 219.2 240 56.2
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 6.7e-55 218.4 237 54.9
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 4.4e-54 215.7 239 56.1
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 7.4e-54 214.9 238 57.6
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 9.7e-54 214.5 217 57.1
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 9.7e-54 214.5 241 57.3
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.3e-53 214.2 240 55.0
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 1.7e-53 213.8 244 59.0
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 4.8e-53 212.2 224 60.3
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 6.3e-53 211.8 247 52.2
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 6.3e-53 211.8 217 57.1
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 6.3e-53 211.8 217 56.7
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 1.8e-52 210.3 269 50.2
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 2.4e-52 209.9 236 56.8
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 7.0e-52 208.4 244 54.5
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 9.1e-52 208.0 219 58.0
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 1.2e-51 207.6 231 55.8
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 2.0e-51 206.8 232 56.9
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 4.5e-51 205.7 249 54.6
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 4.5e-51 205.7 237 54.0
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 7.7e-51 204.9 252 54.0
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 1.3e-50 204.1 233 53.6
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 1.3e-50 204.1 243 52.7
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 5.0e-50 202.2 221 55.7
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 8.5e-50 201.4 241 51.5
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 1.5e-49 200.7 246 51.6
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 7.2e-49 198.4 218 57.8
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 7.2e-49 198.4 247 53.4
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 7.2e-49 198.4 226 56.2
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 1.6e-48 197.2 218 59.2
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 2.1e-48 196.8 221 57.0
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 3.6e-48 196.1 205 60.0
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 1.0e-47 194.5 243 52.3
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 5.2e-47 192.2 235 55.3
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 6.7e-47 191.8 218 56.4
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 6.7e-47 191.8 219 56.2
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 2.6e-46 189.9 229 55.9
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 1.3e-45 187.6 207 58.5
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 4.1e-44 182.6 183 60.7
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 7.0e-44 181.8 254 50.0
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 1.2e-43 181.0 237 46.8
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 1.2e-43 181.0 245 52.2
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 1.6e-43 180.6 217 54.4
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 2.7e-43 179.9 242 50.4
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 1.7e-42 177.2 235 52.3
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 7.2e-41 171.8 265 47.9
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 7.2e-41 171.8 265 47.9
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 7.2e-41 171.8 211 52.6
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 2.7e-40 169.9 177 61.6
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 8.0e-40 168.3 191 60.2
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 5.2e-39 165.6 211 52.1
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 2.0e-38 163.7 213 51.2
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 3.4e-38 162.9 212 55.2
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 3.4e-38 162.9 223 52.0
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 9.8e-38 161.4 216 53.7
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 2.8e-37 159.8 214 52.8
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 1.2e-35 154.5 179 55.3
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 2.3e-34 150.2 233 46.8
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 5.0e-34 149.1 223 45.7
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 4.7e-32 142.5 180 48.9
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 4.7e-32 142.5 180 49.4
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 1.8e-31 140.6 180 43.3
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 2.3e-31 140.2 210 46.2
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 5.2e-31 139.0 236 41.1
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 1.2e-30 137.9 205 44.4
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 1.2e-30 137.9 179 51.4
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 2.6e-30 136.7 229 44.1
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 2.6e-30 136.7 217 47.9
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 3.4e-30 136.3 230 42.2
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 4.4e-30 136.0 243 42.8
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 1.3e-29 134.4 210 45.7
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 1.7e-29 134.0 230 41.3
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 1.7e-29 134.0 269 40.5
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 2.8e-29 133.3 236 42.8
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 2.8e-29 133.3 230 41.3
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 3.7e-29 132.9 251 41.8
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 4.9e-29 132.5 233 41.2
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 8.3e-29 131.7 179 49.7
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 8.3e-29 131.7 215 45.6
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 1.4e-28 131.0 161 54.7
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 4.1e-28 129.4 212 48.1
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 9.2e-28 128.3 79 81.0
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 6.6e-26 122.1 180 42.2
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 6.6e-26 122.1 211 46.0
Ah.07g199030 Amaranthus hybridus HOM05D006859 ORTHO05D007990 5.2e-23 112.5 87 80.5
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 5.2e-23 112.5 176 41.5
AagrBONN_evm.TU.Sc2ySwM_228.2564 Anthoceros agrestis HOM05D006859 ORTHO05D007990 4.1e-20 102.8 124 51.6
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 5.0e-18 95.9 215 34.9
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 5.6e-17 92.4 127 43.3
Mapoly0075s0082 Marchantia polymorpha HOM05D006859 ORTHO05D007990 2.3e-15 87.0 102 60.8
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 5.2e-15 85.9 173 37.0
PSO717G0090 Papaver somniferum HOM05D006859 ORTHO05D007990 8.9e-15 85.1 186 37.6
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 7.5e-14 82.0 137 39.4
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 2.9e-13 80.1 119 38.7
Pp3c27_6080 Physcomitrium patens HOM05D006859 ORTHO05D007990 1.6e-11 74.3 123 49.6
CDE11G0285 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 4.6e-11 72.8 91 52.7
DCAR_008336 Daucus carota HOM05D002294 ORTHO05D002367 8.6e-10 68.6 185 29.7
COL.COLO4_21682 Corchorus olitorius HOM05D006859 ORTHO05D007990 2.8e-08 63.5 138 29.0
CBR_g52283 Chara braunii HOM05D006859 ORTHO05D007990 6.8e-07 58.9 124 45.2
Glyma.11G037400 Glycine max HOM05D006859 ORTHO05D007990 4.4e-06 56.2 136 33.1
VMungo1215G2895 Vigna mungo HOM05D006859 ORTHO05D007990 5.8e-06 55.8 124 29.0
Glyma.01G205500 Glycine max HOM05D006859 ORTHO05D007990 7.5e-06 55.5 106 38.7
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 9.9e-06 55.1 118 28.0


User provided reference genes

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