Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc01g0006440 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.4e-63 245.4 124 100.0
Sc08g0006140 Simmondsia chinensis HOM05D010546 ORTHO05D013352 9.7e-49 196.8 128 81.2
Sc17g0003010 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.3e-47 191.0 128 78.9
Sc07g0004880 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.9e-46 187.6 128 76.6
Sc12g0008070 Simmondsia chinensis HOM05D010546 ORTHO05D013352 7.9e-43 177.2 108 83.3
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 3.0e-42 175.3 108 82.4
Sc02g0004550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.7e-41 171.0 108 81.5
Sc22g0004340 Simmondsia chinensis HOM05D010546 ORTHO05D013352 7.4e-41 170.6 108 79.6
Sc03g0005860 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.3e-39 164.5 110 73.6
Sc19g0006150 Simmondsia chinensis HOM05D010546 ORTHO05D013352 6.9e-39 164.1 105 79.0
Sc03g0004790 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.0e-37 160.2 111 75.7
Sc17g0002940 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.4e-36 156.4 107 72.9
Sc05g0002990 Simmondsia chinensis HOM05D010546 ORTHO05D013352 6.1e-35 151.0 118 68.6
Sc08g0003480 Simmondsia chinensis HOM05D010546 ORTHO05D013352 7.7e-30 134.0 84 78.6
Sc01g0004560 Simmondsia chinensis HOM05D010546 ORTHO05D013352 3.8e-21 105.1 72 75.0
Sc07g0004340 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.2e-18 94.7 85 61.2
Sc16g0004400 Simmondsia chinensis HOM05D010546 ORTHO05D013352 9.8e-17 90.5 56 82.1
Sc09g0006360 Simmondsia chinensis HOM05D010546 ORTHO05D013352 3.7e-16 88.6 71 63.4
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 3.4e-09 65.5 87 40.2
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.4e-09 65.5 82 45.1
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 4.4e-09 65.1 104 36.5
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 5.7e-09 64.7 89 37.1
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.8e-09 63.9 88 37.5
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-08 63.5 77 42.9
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.8e-08 62.4 98 36.7
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.9e-08 61.6 81 43.2
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 6.3e-08 61.2 100 36.0
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 8.3e-08 60.8 86 41.9
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.1e-07 60.5 84 36.9
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 1.8e-07 59.7 107 34.6
EL10Ac9g22369 Beta vulgaris HOM05D000107 ORTHO05D000062 2.4e-07 59.3 103 36.9
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.4e-07 59.3 69 43.5
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 2.4e-07 59.3 64 45.3
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 3.1e-07 58.9 76 40.8
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.1e-07 58.9 67 43.3
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.1e-07 58.5 85 37.6
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.4e-07 58.2 74 44.6
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 7.0e-07 57.8 87 43.7
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.2e-07 57.4 69 40.6
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.2e-07 57.4 67 40.3
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.2e-07 57.4 67 43.3
EL10Ac7g17511 Beta vulgaris HOM05D000107 ORTHO05D000062 1.6e-06 56.6 94 37.2
EL10Ac9g22721 Beta vulgaris HOM05D000107 ORTHO05D000062 1.6e-06 56.6 81 40.7
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.6e-06 56.6 64 43.8
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 2.0e-06 56.2 92 38.0
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 2.0e-06 56.2 92 38.0
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 2.7e-06 55.8 106 36.8
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 2.7e-06 55.8 66 42.4
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 2.7e-06 55.8 92 38.0
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.7e-06 55.8 64 43.8
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.7e-06 55.8 67 38.8
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 3.5e-06 55.5 81 38.3
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.5e-06 55.5 61 45.9
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 4.5e-06 55.1 85 38.8
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 4.5e-06 55.1 89 40.4
SalBow6G6573 Salvia bowleyana HOM05D003888 ORTHO05D007163 4.5e-06 55.1 88 45.5
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.5e-06 55.1 85 35.3
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 5.9e-06 54.7 106 35.8
EL10Ac6g13838 Beta vulgaris HOM05D003888 ORTHO05D007163 5.9e-06 54.7 106 35.8
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 5.9e-06 54.7 106 35.8
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.9e-06 54.7 81 38.3
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 7.7e-06 54.3 63 44.4
EL10Ac5g11836 Beta vulgaris HOM05D000107 ORTHO05D000062 7.7e-06 54.3 76 38.2
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.7e-06 54.3 81 39.5


User provided reference genes

Program Settings