Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc01g0005980 Simmondsia chinensis HOM05D006592 ORTHO05D008122 8.9e-170 600.1 291 100.0
EL10Ac5g11887 Beta vulgaris HOM05D006592 ORTHO05D008122 4.5e-113 411.8 276 71.4
AUR62007438 Chenopodium quinoa HOM05D006592 ORTHO05D008122 7.7e-113 411.0 275 71.6
Dinv37459 Davidia involucrata HOM05D006592 ORTHO05D008122 2.2e-112 409.5 285 67.4
TAR622G1375 Trochodendron aralioides HOM05D006592 ORTHO05D008122 3.8e-112 408.7 284 67.6
Hma1.2p1_1046F.1_g251540 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 1.1e-111 407.1 285 66.7
Hma1.2p1_1256F.1_g270670 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 1.9e-111 406.4 285 66.3
QL02p100032 Quercus lobata HOM05D006592 ORTHO05D008122 1.6e-110 403.3 282 65.6
MD07G1026800 Malus domestica HOM05D006592 ORTHO05D008122 1.8e-109 399.8 278 66.9
Potri.003G105100 Populus trichocarpa HOM05D006592 ORTHO05D008122 3.9e-109 398.7 280 65.7
Hund14317 Selenicereus undatus HOM05D006592 ORTHO05D008122 3.9e-109 398.7 297 66.0
Prupe.2G060600 Prunus persica HOM05D006592 ORTHO05D008122 1.1e-108 397.1 285 64.2
Glyma.16G106500 Glycine max HOM05D006592 ORTHO05D008122 2.0e-108 396.4 283 66.1
CiPaw.11G105000 Carya illinoinensis HOM05D006592 ORTHO05D008122 4.3e-108 395.2 284 65.1
Aqoxy7G04139 Aquilegia oxysepala HOM05D006592 ORTHO05D008122 9.7e-108 394.0 279 67.4
RcHm_v2.0_Chr1g0331171 Rosa chinensis HOM05D006592 ORTHO05D008122 2.2e-107 392.9 290 63.4
FAN21G3043 Fragaria x ananassa HOM05D006592 ORTHO05D008122 2.8e-107 392.5 285 63.5
Sabra03G0072100 Salix brachista HOM05D006592 ORTHO05D008122 3.7e-107 392.1 287 63.8
GSVIVG01036935001 Vitis vinifera HOM05D006592 ORTHO05D008122 1.1e-106 390.6 268 69.0
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 1.4e-106 390.2 283 65.7
Duzib084G0624 Durio zibethinus HOM05D006592 ORTHO05D008122 1.8e-106 389.8 277 66.8
Ah.02g117360 Amaranthus hybridus HOM05D006592 ORTHO05D008122 2.4e-106 389.4 266 71.8
FAN25G1190 Fragaria x ananassa HOM05D006592 ORTHO05D008122 2.4e-106 389.4 285 63.2
Glyma.16G075200 Glycine max HOM05D006592 ORTHO05D008122 3.1e-106 389.0 283 65.0
Medtr8g071820 Medicago truncatula HOM05D006592 ORTHO05D008122 9.1e-106 387.5 278 66.2
Phvul.003G276900 Phaseolus vulgaris HOM05D006592 ORTHO05D008122 9.1e-106 387.5 283 64.7
arahy.Tifrunner.gnm1.ann1.6CV8VS Arachis hypogaea HOM05D006592 ORTHO05D008122 1.2e-105 387.1 283 66.8
Manes.17G005500 Manihot esculenta HOM05D006592 ORTHO05D008122 1.2e-105 387.1 278 65.5
Haze_08005 Corylus avellana HOM05D006592 ORTHO05D008122 1.5e-105 386.7 287 62.0
Lalb_Chr05g0229391 Lupinus albus HOM05D006592 ORTHO05D008122 2.0e-105 386.3 285 66.0
TPR.G16815 Trifolium pratense HOM05D006592 ORTHO05D008122 2.0e-105 386.3 278 66.2
arahy.Tifrunner.gnm1.ann1.35U8WI Arachis hypogaea HOM05D006592 ORTHO05D008122 2.6e-105 386.0 285 66.0
Rhsim07G0174700 Rhododendron simsii HOM05D006592 ORTHO05D008122 2.6e-105 386.0 282 63.1
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 3.4e-105 385.6 278 65.5
FvH4_3g41920 Fragaria vesca HOM05D006592 ORTHO05D008122 7.7e-105 384.4 285 62.1
vmacro05080 Vaccinium macrocarpon HOM05D006592 ORTHO05D008122 7.7e-105 384.4 288 60.8
DCAR_028262 Daucus carota HOM05D006592 ORTHO05D008122 1.7e-104 383.3 279 62.7
FAN11G2031 Fragaria x ananassa HOM05D006592 ORTHO05D008122 2.9e-104 382.5 285 62.1
PSO782G0843 Papaver somniferum HOM05D006592 ORTHO05D008122 5.0e-104 381.7 283 64.0
Thecc.03G323800 Theobroma cacao HOM05D006592 ORTHO05D008122 8.5e-104 380.9 277 63.5
PSO063G4459 Papaver somniferum HOM05D006592 ORTHO05D008122 1.1e-103 380.6 283 64.0
CsaV3_4G037940 Cucumis sativus L. HOM05D006592 ORTHO05D008122 1.2e-102 377.1 278 62.6
PGR042G2051 Punica granatum HOM05D006592 ORTHO05D008122 1.2e-102 377.1 274 64.2
COL.COLO4_16712 Corchorus olitorius HOM05D006592 ORTHO05D008122 2.7e-102 375.9 277 61.7
Eucgr.E01202 Eucalyptus grandis HOM05D006592 ORTHO05D008122 2.7e-102 375.9 278 64.0
MELO3C010544.2 Cucumis melo HOM05D006592 ORTHO05D008122 6.1e-102 374.8 278 62.9
Atru.chr6.2117 Acer truncatum HOM05D006592 ORTHO05D008122 1.8e-101 373.2 284 62.3
ClCG11G016240 Citrullus lanatus HOM05D006592 ORTHO05D008122 3.9e-101 372.1 278 63.3
Actinidia29329 Actinidia chinensis HOM05D006592 ORTHO05D008122 8.8e-101 370.9 286 62.2
Gorai.004G175600 Gossypium raimondii HOM05D006592 ORTHO05D008122 8.8e-101 370.9 277 61.4
Gohir.D08G168300 Gossypium hirsutum HOM05D006592 ORTHO05D008122 1.5e-100 370.2 277 61.0
Aa31LG2G14540 Aethionema arabicum HOM05D006592 ORTHO05D008122 2.0e-100 369.8 277 64.3
HanXRQChr13g0411871 Helianthus annuus HOM05D006592 ORTHO05D008122 2.6e-100 369.4 282 61.3
Os04g0602200 Oryza sativa ssp. japonica HOM05D006592 ORTHO05D008122 6.3e-99 364.8 278 61.5
Migut.E01392 Erythranthe guttata HOM05D006592 ORTHO05D008122 2.4e-98 362.8 271 63.8
SalBow8G1786 Salvia bowleyana HOM05D006592 ORTHO05D008122 2.4e-98 362.8 281 60.9
BcaB03g13796 Brassica carinata HOM05D006592 ORTHO05D008122 3.1e-98 362.5 277 63.5
Solyc08g005860.3 Solanum lycopersicum HOM05D006592 ORTHO05D008122 9.1e-98 360.9 285 60.4
SalBow8G4832 Salvia bowleyana HOM05D006592 ORTHO05D008122 2.0e-97 359.8 278 60.8
AL1G49640 Arabidopsis lyrata HOM05D006592 ORTHO05D008122 2.6e-97 359.4 279 63.1
C07p14480 Brassica napus HOM05D006592 ORTHO05D008122 4.5e-97 358.6 280 62.5
BolC7t41947H Brassica oleracea HOM05D006592 ORTHO05D008122 4.5e-97 358.6 280 62.1
BraA07t28736Z Brassica rapa HOM05D006592 ORTHO05D008122 4.5e-97 358.6 280 62.9
CARHR030900 Cardamine hirsuta HOM05D006592 ORTHO05D008122 4.5e-97 358.6 276 63.8
Carub.0001s2983 Capsella rubella HOM05D006592 ORTHO05D008122 5.9e-97 358.2 276 63.0
Nitab4.5_0004477g0030 Nicotiana tabacum HOM05D006592 ORTHO05D008122 5.9e-97 358.2 280 60.7
Sp1g27210 Schrenkiella parvula HOM05D006592 ORTHO05D008122 7.7e-97 357.8 276 63.0
Cc00_g08640 Coffea canephora HOM05D006592 ORTHO05D008122 1.0e-96 357.5 283 59.7
Thhalv10007328m.g Eutrema salsugineum HOM05D006592 ORTHO05D008122 1.0e-96 357.5 276 63.0
CDE11G0624 Ceratophyllum demersum HOM05D006592 ORTHO05D008122 1.3e-96 357.1 283 59.4
AT1G31410 Arabidopsis thaliana HOM05D006592 ORTHO05D008122 1.7e-96 356.7 279 62.7
Sopen08g001820 Solanum pennellii HOM05D006592 ORTHO05D008122 2.2e-96 356.3 285 59.6
TWI60G0674 Tripterygium wilfordii HOM05D006592 ORTHO05D008122 2.2e-96 356.3 280 60.7
PGSC0003DMG400024141 Solanum tuberosum HOM05D006592 ORTHO05D008122 3.8e-96 355.5 285 60.0
A07p09410 Brassica napus HOM05D006592 ORTHO05D008122 6.5e-96 354.8 280 62.1
THA.LOC104814375 Tarenaya hassleriana HOM05D006592 ORTHO05D008122 1.1e-95 354.0 275 61.1
ATR0829G075 Amborella trichopoda HOM05D006592 ORTHO05D008122 3.2e-95 352.4 281 59.8
CAN.G561.14 Capsicum annuum HOM05D006592 ORTHO05D008122 3.2e-95 352.4 285 58.2
Nitab4.5_0000063g0390 Nicotiana tabacum HOM05D006592 ORTHO05D008122 5.5e-95 351.7 292 58.9
Nn1g09214 Nelumbo nucifera HOM05D006592 ORTHO05D008122 7.2e-95 351.3 247 66.8
Peaxi162Scf00045g01236 Petunia axillaris HOM05D006592 ORTHO05D008122 7.2e-95 351.3 272 59.9
Lsat_1_v5_gn_5_55220 Lactuca sativa HOM05D006592 ORTHO05D008122 4.7e-94 348.6 279 59.5
Zm00001eb430350 Zea mays HOM05D006592 ORTHO05D008122 6.1e-94 348.2 277 58.1
Oeu028120.2 Olea europaea HOM05D006592 ORTHO05D008122 8.0e-94 347.8 289 59.9
SGA_v2.0_scaffold144G35824 Striga asiatica HOM05D006592 ORTHO05D008122 1.7e-91 340.1 271 59.4
ECA240G2178 Erigeron canadensis HOM05D006592 ORTHO05D008122 3.1e-90 335.9 287 57.8
VMungo0251G2096 Vigna mungo HOM05D006592 ORTHO05D008122 2.0e-89 333.2 237 65.8
CSS0028407 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 4.7e-86 322.0 272 59.6
Lj4g0008520 Lotus japonicus HOM05D006592 ORTHO05D008122 1.0e-85 320.9 233 66.1
unitig_899.g15474 Utricularia gibba HOM05D006592 ORTHO05D008122 1.2e-84 317.4 261 58.6
Lj8A380T21 Lonicera japonica HOM05D006592 ORTHO05D008122 5.9e-81 305.1 235 61.7
CSS0043715 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 2.1e-78 296.6 257 58.8
HPP92_015141 Vanilla planifolia HOM05D006592 ORTHO05D008122 5.7e-76 288.5 203 63.5
SMO244G0026 Selaginella moellendorffii HOM05D006592 ORTHO05D008122 8.3e-75 284.6 257 52.5
Mapoly0006s0240 Marchantia polymorpha HOM05D006592 ORTHO05D008122 7.0e-74 281.6 307 48.2
Pp3c1_19230 Physcomitrium patens HOM05D006592 ORTHO05D008122 8.6e-72 274.6 249 52.6
AagrBONN_evm.TU.Sc2ySwM_344.4668 Anthoceros agrestis HOM05D006592 ORTHO05D008122 1.2e-70 270.8 305 43.9
AUR62027300 Chenopodium quinoa HOM05D006592 ORTHO05D008122 1.1e-66 257.7 240 57.1
Gohir.A08G147100 Gossypium hirsutum HOM05D006592 ORTHO05D008122 4.0e-61 239.2 149 74.5
CBR_g37675 Chara braunii HOM05D006592 ORTHO05D008122 2.3e-56 223.4 212 49.5
CBR_g19872 Chara braunii HOM05D006592 ORTHO05D008122 2.5e-55 219.9 210 50.0
MBI04_g30774_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 1.2e-36 157.9 277 34.3
Cpa.g.sc137.29 Carica papaya HOM05D006592 ORTHO05D008122 1.7e-35 154.1 103 72.8
Cre06.g292100 Chlamydomonas reinhardtii HOM05D006592 ORTHO05D008122 1.4e-34 151.0 209 39.2
MBI14_g31659_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 1.0e-32 144.8 96 77.1
Sed0001244 Sechium edule HOM05D006592 ORTHO05D008122 8.1e-30 135.2 206 35.9
MBI02_g32478_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 1.5e-28 131.0 91 71.4
PRCOL_00001501 Prasinoderma coloniale HOM05D006592 ORTHO05D008122 2.0e-28 130.6 266 35.0
MCO09G637 Micromonas commoda HOM05D006592 ORTHO05D008122 2.9e-27 126.7 195 37.9
SEGI_06764 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 1.3e-24 117.9 123 46.3
AagrBONN_evm.TU.Sc2ySwM_117.3387 Anthoceros agrestis HOM05D006592 ORTHO05D008122 7.3e-23 112.1 158 34.8
Zm00001eb071790 Zea mays HOM05D006592 ORTHO05D008122 3.6e-22 109.8 203 35.5
Dinv37458 Davidia involucrata HOM05D000040 ORTHO05D000267 1.9e-15 87.4 78 57.7
C08p16710 Brassica napus HOM05D006592 ORTHO05D008122 7.1e-10 68.9 35 74.3
CSS0050204 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 1.6e-09 67.8 35 77.1
CANSAT11G2102 Cannabis sativa HOM05D006592 ORTHO05D008122 1.0e-08 65.1 35 77.1


User provided reference genes

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