Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc01g0004620 Simmondsia chinensis HOM05D007574 ORTHO05D007552 1.4e-50 202.6 102 100.0
Dinv37135 Davidia involucrata HOM05D007574 ORTHO05D007552 4.1e-13 78.2 86 53.5
Potri.006G090100 Populus trichocarpa HOM05D007574 ORTHO05D007552 7.0e-13 77.4 87 51.7
Manes.09G095800 Manihot esculenta HOM05D007574 ORTHO05D007552 1.2e-12 76.6 84 52.4
Duzib128G0069 Durio zibethinus HOM05D007574 ORTHO05D007552 3.5e-12 75.1 95 47.4
Duzib106G1300 Durio zibethinus HOM05D007574 ORTHO05D007552 7.8e-12 73.9 91 51.6
Sabra06G0068200 Salix brachista HOM05D007574 ORTHO05D007552 1.3e-11 73.2 75 52.0
Manes.08G080600 Manihot esculenta HOM05D007574 ORTHO05D007552 2.3e-11 72.4 88 46.6
Potri.016G101900 Populus trichocarpa HOM05D007574 ORTHO05D007552 6.6e-11 70.9 87 48.3
Thecc.05G033200 Theobroma cacao HOM05D007574 ORTHO05D007552 6.6e-11 70.9 87 47.1
Glyma.01G102300 Glycine max HOM05D007574 ORTHO05D007552 8.6e-11 70.5 85 49.4
Gohir.D04G123600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 1.1e-10 70.1 102 46.1
TPR.G27329 Trifolium pratense HOM05D007574 ORTHO05D007552 1.1e-10 70.1 83 53.0
Medtr7g063490 Medicago truncatula HOM05D007574 ORTHO05D007552 2.5e-10 68.9 80 51.2
Gorai.012G106400 Gossypium raimondii HOM05D007574 ORTHO05D007552 5.6e-10 67.8 102 45.1
QL07p028963 Quercus lobata HOM05D007574 ORTHO05D007552 7.3e-10 67.4 89 43.8
QL07p029642 Quercus lobata HOM05D007574 ORTHO05D007552 7.3e-10 67.4 89 43.8
TWI77G0884 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 7.3e-10 67.4 90 45.6
Lj3g0003670 Lotus japonicus HOM05D007574 ORTHO05D007552 1.2e-09 66.6 99 45.5
TWI53G1464 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 1.2e-09 66.6 80 45.0
AUR62027719 Chenopodium quinoa HOM05D007574 ORTHO05D007552 2.1e-09 65.9 104 43.3
Glyma.18G187300 Glycine max HOM05D007574 ORTHO05D007552 2.1e-09 65.9 84 46.4
Glyma.03G067200 Glycine max HOM05D007574 ORTHO05D007552 2.8e-09 65.5 74 48.6
Nn2g13483 Nelumbo nucifera HOM05D007574 ORTHO05D007552 2.8e-09 65.5 81 43.2
Gohir.A04G084700 Gossypium hirsutum HOM05D007574 ORTHO05D007552 4.7e-09 64.7 104 42.3
AUR62043962 Chenopodium quinoa HOM05D007574 ORTHO05D007552 8.0e-09 63.9 103 39.8
Phvul.008G115600 Phaseolus vulgaris HOM05D007574 ORTHO05D007552 2.3e-08 62.4 80 42.5
Phvul.010G016401 Phaseolus vulgaris HOM05D007574 ORTHO05D007552 2.3e-08 62.4 98 40.8
Ciclev10013212m.g Citrus clementina HOM05D007574 ORTHO05D007552 3.1e-08 62.0 83 48.2
Medtr4g021330 Medicago truncatula HOM05D007574 ORTHO05D007552 3.1e-08 62.0 89 43.8
CSS0039527 Camellia sinensis var. sinensis HOM05D007574 ORTHO05D007552 5.2e-08 61.2 87 47.1
Eucgr.B02706 Eucalyptus grandis HOM05D007574 ORTHO05D007552 5.2e-08 61.2 92 38.0
MELO3C009230.2 Cucumis melo HOM05D007574 ORTHO05D007552 6.8e-08 60.8 91 46.2
Aqoxy2G02344 Aquilegia oxysepala HOM05D007574 ORTHO05D007552 8.9e-08 60.5 75 48.0
Gohir.A01G221600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 1.2e-07 60.1 56 48.2
Hma1.2p1_0766F.1_g215190 Hydrangea macrophylla HOM05D007574 ORTHO05D007552 1.2e-07 60.1 66 51.5
ClCG10G021430 Citrullus lanatus HOM05D007574 ORTHO05D007552 2.0e-07 59.3 94 47.9
Eucgr.K03060 Eucalyptus grandis HOM05D007574 ORTHO05D007552 2.0e-07 59.3 88 43.2
Gohir.D01G210600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 2.0e-07 59.3 77 41.6
Gorai.002G256300 Gossypium raimondii HOM05D007574 ORTHO05D007552 2.0e-07 59.3 77 41.6
MBI05_g35175_MAGBIO Magnolia biondii HOM05D007574 ORTHO05D007552 2.6e-07 58.9 96 41.7
Nn2g11240 Nelumbo nucifera HOM05D007574 ORTHO05D007552 2.6e-07 58.9 91 42.9
PGR031G1556 Punica granatum HOM05D007574 ORTHO05D007552 3.4e-07 58.5 102 40.2
GSVIVG01034109001 Vitis vinifera HOM05D007574 ORTHO05D007552 3.4e-07 58.5 104 44.2
Lj1g0014408 Lotus japonicus HOM05D007574 ORTHO05D007552 4.4e-07 58.2 80 42.5
CiPaw.10G148000 Carya illinoinensis HOM05D007574 ORTHO05D007552 7.5e-07 57.4 95 42.1
MD12G1149400 Malus domestica HOM05D007574 ORTHO05D007552 9.8e-07 57.0 84 41.7
Ah.01g023650 Amaranthus hybridus HOM05D007574 ORTHO05D007552 1.3e-06 56.6 109 39.4
TPR.G5586 Trifolium pratense HOM05D007574 ORTHO05D007552 1.3e-06 56.6 48 60.4
CsaV3_3G034590 Cucumis sativus L. HOM05D007574 ORTHO05D007552 1.7e-06 56.2 89 46.1
RcHm_v2.0_Chr3g0465351 Rosa chinensis HOM05D007574 ORTHO05D007552 1.7e-06 56.2 88 39.8
CiPaw.09G197900 Carya illinoinensis HOM05D007574 ORTHO05D007552 2.2e-06 55.8 87 43.7
Prupe.6G261000 Prunus persica HOM05D007574 ORTHO05D007552 2.2e-06 55.8 85 42.4
Glyma.07G136800 Glycine max HOM05D007574 ORTHO05D007552 2.9e-06 55.5 82 51.2
Rhsim05G0198100 Rhododendron simsii HOM05D007574 ORTHO05D007552 2.9e-06 55.5 65 49.2
FAN09G4076 Fragaria x ananassa HOM05D007574 ORTHO05D007552 3.7e-06 55.1 87 40.2
Lalb_Chr19g0125161 Lupinus albus HOM05D007574 ORTHO05D007552 3.7e-06 55.1 68 39.7
TAR633G0850 Trochodendron aralioides HOM05D007574 ORTHO05D007552 3.7e-06 55.1 94 41.5
Lj1g0012526 Lotus japonicus HOM05D007574 ORTHO05D007552 4.9e-06 54.7 80 40.0
Peaxi162Scf00330g00113 Petunia axillaris HOM05D007574 ORTHO05D007552 4.9e-06 54.7 87 40.2
FAN05G1951 Fragaria x ananassa HOM05D007574 ORTHO05D007552 6.4e-06 54.3 88 39.8


User provided reference genes

Program Settings