Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc01g0004310 Simmondsia chinensis HOM05D005967 ORTHO05D005174 1.0e-84 316.6 155 100.0
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 2.5e-14 82.8 106 50.0
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 9.7e-14 80.9 81 56.8
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 2.2e-13 79.7 81 56.8
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 2.8e-13 79.3 81 51.9
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 2.8e-13 79.3 108 44.4
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 1.1e-12 77.4 80 50.0
EL10As1g23034 Beta vulgaris HOM05D005967 ORTHO05D005174 1.4e-12 77.0 89 47.2
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 1.8e-12 76.6 84 48.8
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 2.4e-12 76.3 84 52.4
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 4.1e-12 75.5 84 52.4
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 4.1e-12 75.5 80 50.0
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 4.1e-12 75.5 80 51.2
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 1.5e-11 73.6 91 44.0
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 1.5e-11 73.6 84 44.0
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.0e-11 73.2 85 47.1
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 2.6e-11 72.8 91 45.1
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 4.5e-11 72.0 101 39.6
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 4.5e-11 72.0 104 40.4
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 7.7e-11 71.2 85 45.9
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 7.7e-11 71.2 83 48.2
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.0e-10 70.9 100 38.0
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.3e-10 70.5 93 43.0
Rhsim05G0192000 Rhododendron simsii HOM05D005967 ORTHO05D005174 1.3e-10 70.5 97 44.3
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.7e-10 70.1 93 43.0
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 1.7e-10 70.1 84 44.0
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 1.7e-10 70.1 80 43.8
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 2.2e-10 69.7 94 44.7
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.9e-10 69.3 81 45.7
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 2.9e-10 69.3 81 45.7
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 3.8e-10 68.9 95 41.1
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.8e-10 68.9 76 46.1
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 5.0e-10 68.6 104 40.4
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 6.5e-10 68.2 108 41.7
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 6.5e-10 68.2 76 50.0
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 8.5e-10 67.8 76 44.7
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 8.5e-10 67.8 82 46.3
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 1.1e-09 67.4 90 46.7
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.1e-09 67.4 105 46.7
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 1.4e-09 67.0 83 43.4
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.9e-09 66.6 87 44.8
THA.LOC104827013 Tarenaya hassleriana HOM05D010528 ORTHO05D005174 1.9e-09 66.6 117 35.9
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 2.5e-09 66.2 81 44.4
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 2.5e-09 66.2 81 44.4
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 4.2e-09 65.5 92 41.3
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 4.2e-09 65.5 83 45.8
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 5.5e-09 65.1 92 42.4
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 7.2e-09 64.7 89 42.7
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 9.4e-09 64.3 81 46.9
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.2e-08 63.9 84 45.2
DCAR_020849 Daucus carota HOM05D005967 ORTHO05D005174 1.6e-08 63.5 81 43.2
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 2.1e-08 63.2 88 43.2
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 2.7e-08 62.8 85 41.2
Gohir.A04G082200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.7e-08 62.8 76 44.7
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 2.7e-08 62.8 82 47.6
THA.LOC104823258 Tarenaya hassleriana HOM05D010528 ORTHO05D005174 2.7e-08 62.8 113 35.4
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 6.1e-08 61.6 83 38.6
Oeu024352.1 Olea europaea HOM05D005967 ORTHO05D005174 6.1e-08 61.6 67 55.2
Aa31LG1G22380 Aethionema arabicum HOM05D010528 ORTHO05D005174 7.9e-08 61.2 84 42.9
Oeu011403.1 Olea europaea HOM05D005967 ORTHO05D005174 7.9e-08 61.2 80 48.8
Carub.0006s0121 Capsella rubella HOM05D010528 ORTHO05D005174 1.0e-07 60.8 118 38.1
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 1.0e-07 60.8 80 42.5
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 1.0e-07 60.8 81 49.4
Peaxi162Scf00679g00042 Petunia axillaris HOM05D005967 ORTHO05D014046 1.0e-07 60.8 105 37.1
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 1.4e-07 60.5 86 45.3
Atru.chr8.1967 Acer truncatum HOM05D005967 ORTHO05D005174 1.8e-07 60.1 95 40.0
MSTRG.5669 Avicennia marina HOM05D005967 ORTHO05D005174 1.8e-07 60.1 84 47.6
Sp7g08770 Schrenkiella parvula HOM05D010528 ORTHO05D005174 1.8e-07 60.1 121 38.0
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.3e-07 59.7 94 41.5
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 3.0e-07 59.3 85 44.7
AL6G11650 Arabidopsis lyrata HOM05D010528 ORTHO05D005174 5.1e-07 58.5 82 46.3
Eucgr.A01260 Eucalyptus grandis HOM05D005967 ORTHO05D005174 5.1e-07 58.5 84 44.0
Prupe.6G254000 Prunus persica HOM05D005967 ORTHO05D005174 5.1e-07 58.5 83 42.2
CSS0050426 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 6.7e-07 58.2 161 31.1
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 8.8e-07 57.8 86 39.5
Oeu019207.1 Olea europaea HOM05D005967 ORTHO05D005174 8.8e-07 57.8 104 38.5
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 8.8e-07 57.8 82 42.7
FvH4_3g35950 Fragaria vesca HOM05D005967 ORTHO05D005174 1.1e-06 57.4 121 33.9
vmacro20146 Vaccinium macrocarpon HOM05D005967 ORTHO05D005174 1.1e-06 57.4 40 72.5
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 2.0e-06 56.6 84 41.7
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 2.0e-06 56.6 84 41.7
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 2.0e-06 56.6 84 41.7
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 2.0e-06 56.6 87 42.5
Sed0016652 Sechium edule HOM05D023073 ORTHO05D005174 2.0e-06 56.6 133 30.8
AT5G02420 Arabidopsis thaliana HOM05D010528 ORTHO05D005174 2.5e-06 56.2 93 43.0
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 2.5e-06 56.2 80 40.0
Eucgr.B02374 Eucalyptus grandis HOM05D005967 ORTHO05D005174 2.5e-06 56.2 81 42.0
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 2.5e-06 56.2 83 39.8
CARHR210990 Cardamine hirsuta HOM05D010528 ORTHO05D005174 4.3e-06 55.5 119 34.5
FAN11G1916 Fragaria x ananassa HOM05D005967 ORTHO05D005174 5.7e-06 55.1 121 33.1
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 7.4e-06 54.7 91 38.5
Sopen11g025730 Solanum pennellii HOM05D030065 ORTHO05D005174 7.4e-06 54.7 82 45.1


User provided reference genes

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