Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc01g0004150 Simmondsia chinensis HOM05D002846 ORTHO05D002692 2.1e-85 318.9 158 100.0
Sc12g0002340 Simmondsia chinensis HOM05D002846 ORTHO05D002692 9.8e-22 107.5 193 39.9
AUR62037135 Chenopodium quinoa HOM05D002846 ORTHO05D002692 8.1e-16 87.8 151 43.0
TWI39G1011 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 6.8e-15 84.7 157 40.8
Sabra14G0115500 Salix brachista HOM05D002846 ORTHO05D002692 8.9e-15 84.3 187 37.4
GSVIVG01030606001 Vitis vinifera HOM05D002846 ORTHO05D002692 1.5e-14 83.6 173 36.4
QL08p012603 Quercus lobata HOM05D002846 ORTHO05D002692 4.4e-14 82.0 170 38.8
Lalb_Chr14g0367581 Lupinus albus HOM05D002846 ORTHO05D002692 5.8e-14 81.6 187 36.4
Duzib251G0618 Durio zibethinus HOM05D002846 ORTHO05D002692 9.8e-14 80.9 179 39.1
Manes.13G071601 Manihot esculenta HOM05D002846 ORTHO05D002692 9.8e-14 80.9 174 37.9
Potri.011G135700 Populus trichocarpa HOM05D002846 ORTHO05D002692 2.9e-13 79.3 173 36.4
VMungo0971G0001 Vigna mungo HOM05D002846 ORTHO05D002692 2.9e-13 79.3 172 36.0
EL10Ac9g20666 Beta vulgaris HOM05D002846 ORTHO05D002692 3.7e-13 79.0 162 40.1
Potri.014G151900 Populus trichocarpa HOM05D002846 ORTHO05D002692 3.7e-13 79.0 178 38.2
Hund01143 Selenicereus undatus HOM05D002846 ORTHO05D002692 3.7e-13 79.0 127 45.7
TAR627G0783 Trochodendron aralioides HOM05D002846 ORTHO05D002692 4.9e-13 78.6 185 34.6
Lalb_Chr19g0135751 Lupinus albus HOM05D002846 ORTHO05D002692 6.4e-13 78.2 151 37.7
Lalb_Chr01g0005591 Lupinus albus HOM05D002846 ORTHO05D002692 8.3e-13 77.8 162 37.0
Nn1g07065 Nelumbo nucifera HOM05D002846 ORTHO05D002692 1.1e-12 77.4 155 38.1
Ciclev10018295m.g Citrus clementina HOM05D002846 ORTHO05D002692 1.4e-12 77.0 171 37.4
Potri.001G419400 Populus trichocarpa HOM05D002846 ORTHO05D002692 1.4e-12 77.0 195 34.9
Solyc12g005820.3 Solanum lycopersicum HOM05D002846 ORTHO05D002692 1.9e-12 76.6 159 34.6
Lalb_Chr03g0028801 Lupinus albus HOM05D002846 ORTHO05D002692 2.4e-12 76.3 182 38.5
Aqoxy4G01970 Aquilegia oxysepala HOM05D002846 ORTHO05D002692 3.2e-12 75.9 172 33.7
Nitab4.5_0001176g0060 Nicotiana tabacum HOM05D002846 ORTHO05D002692 3.2e-12 75.9 167 36.5
Sopen12g001770 Solanum pennellii HOM05D002846 ORTHO05D002692 9.2e-12 74.3 159 35.8
TWI38G2122 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 1.6e-11 73.6 179 35.8
Glyma.12G194600 Glycine max HOM05D002846 ORTHO05D002692 2.7e-11 72.8 187 33.2
Psat5g251520 Pisum sativum HOM05D002846 ORTHO05D002692 2.7e-11 72.8 156 34.0
Sabra11G0121900 Salix brachista HOM05D002846 ORTHO05D002692 2.7e-11 72.8 184 35.3
PGSC0003DMG400008737 Solanum tuberosum HOM05D002846 ORTHO05D002692 2.7e-11 72.8 154 33.8
Phvul.011G105200 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 3.5e-11 72.4 190 33.2
Actinidia05119 Actinidia chinensis HOM05D002846 ORTHO05D002692 6.0e-11 71.6 164 37.2
BcaC05g28139 Brassica carinata HOM05D002846 ORTHO05D002692 6.0e-11 71.6 151 35.8
Hma1.2p1_0948F.1_g240490 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 6.0e-11 71.6 175 37.1
AUR62025052 Chenopodium quinoa HOM05D002846 ORTHO05D002692 7.8e-11 71.2 104 47.1
Sabra02G0175700 Salix brachista HOM05D002846 ORTHO05D002692 7.8e-11 71.2 194 32.5
ATR0697G184 Amborella trichopoda HOM05D002846 ORTHO05D002692 1.0e-10 70.9 166 33.7
Sabra16G0285000 Salix brachista HOM05D002846 ORTHO05D002692 1.0e-10 70.9 184 33.2
PGSC0003DMG400005270 Solanum tuberosum HOM05D002846 ORTHO05D002692 1.0e-10 70.9 162 34.6
TPR.G4201 Trifolium pratense HOM05D002846 ORTHO05D002692 1.0e-10 70.9 171 36.3
Medtr2g088590 Medicago truncatula HOM05D002846 ORTHO05D002692 1.7e-10 70.1 179 36.9
Nitab4.5_0002083g0020 Nicotiana tabacum HOM05D002846 ORTHO05D002692 1.7e-10 70.1 162 37.0
Psat5g264560 Pisum sativum HOM05D002846 ORTHO05D002692 1.7e-10 70.1 188 35.1
QL08p033485 Quercus lobata HOM05D002846 ORTHO05D002692 1.7e-10 70.1 164 34.8
RcHm_v2.0_Chr2g0159761 Rosa chinensis HOM05D002846 ORTHO05D002692 1.7e-10 70.1 185 35.1
Nitab4.5_0001884g0020 Nicotiana tabacum HOM05D002846 ORTHO05D002692 2.3e-10 69.7 160 36.9
TWI38G1873 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 2.3e-10 69.7 174 33.3
TAR624G1330 Trochodendron aralioides HOM05D002846 ORTHO05D002692 2.3e-10 69.7 172 36.6
Duzib268G1153 Durio zibethinus HOM05D002846 ORTHO05D002692 3.0e-10 69.3 153 36.6
FAN14G0905 Fragaria x ananassa HOM05D002846 ORTHO05D002692 3.0e-10 69.3 169 34.3
Hma1.2p1_0249F.1_g102340 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 3.0e-10 69.3 174 31.0
Hma1.2p1_1344F.1_g277060 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 3.0e-10 69.3 155 38.7
FvH4_6g43420 Fragaria vesca HOM05D002846 ORTHO05D002692 3.9e-10 68.9 169 34.3
FAN25G2313 Fragaria x ananassa HOM05D002846 ORTHO05D002692 6.6e-10 68.2 179 31.3
Lj3g0014799 Lotus japonicus HOM05D002846 ORTHO05D002692 6.6e-10 68.2 177 33.3
TPR.G19979 Trifolium pratense HOM05D002846 ORTHO05D002692 6.6e-10 68.2 179 33.0
CAN.G1151.1 Capsicum annuum HOM05D002846 ORTHO05D002692 8.6e-10 67.8 192 34.4
FAN09G0250 Fragaria x ananassa HOM05D002846 ORTHO05D002692 8.6e-10 67.8 169 33.7
Medtr2g083300 Medicago truncatula HOM05D002846 ORTHO05D002692 8.6e-10 67.8 162 35.2
Peaxi162Scf00932g00218 Petunia axillaris HOM05D002846 ORTHO05D002692 8.6e-10 67.8 180 31.7
GSVIVG01001985001 Vitis vinifera HOM05D002846 ORTHO05D002692 8.6e-10 67.8 184 34.8
Nitab4.5_0000006g0090 Nicotiana tabacum HOM05D002846 ORTHO05D002692 1.1e-09 67.4 164 38.4
Duzib213G0532 Durio zibethinus HOM05D002846 ORTHO05D002692 1.5e-09 67.0 175 36.6
HanXRQChr15g0496381 Helianthus annuus HOM05D002846 ORTHO05D002692 1.5e-09 67.0 171 32.2
THA.LOC104808493 Tarenaya hassleriana HOM05D002846 ORTHO05D002692 1.5e-09 67.0 169 34.9
vmacro12218 Vaccinium macrocarpon HOM05D002846 ORTHO05D002692 1.5e-09 67.0 201 31.8
FAN02G4078 Fragaria x ananassa HOM05D002846 ORTHO05D002692 1.9e-09 66.6 169 33.7
FAN05G4571 Fragaria x ananassa HOM05D002846 ORTHO05D002692 1.9e-09 66.6 183 31.7
Glyma.06G303502 Glycine max HOM05D002846 ORTHO05D002692 1.9e-09 66.6 186 31.7
Glyma.12G100400 Glycine max HOM05D002846 ORTHO05D002692 1.9e-09 66.6 186 31.7
MD09G1107000 Malus domestica HOM05D002846 ORTHO05D002692 1.9e-09 66.6 182 33.0
Thecc.02G312900 Theobroma cacao HOM05D002846 ORTHO05D002692 1.9e-09 66.6 178 36.5
Manes.03G127850 Manihot esculenta HOM05D002846 ORTHO05D002692 2.5e-09 66.2 187 31.0
Actinidia27214 Actinidia chinensis HOM05D002846 ORTHO05D002692 3.3e-09 65.9 180 35.6
Prupe.4G205800 Prunus persica HOM05D002846 ORTHO05D002692 3.3e-09 65.9 162 34.6
Lj3g0002811 Lotus japonicus HOM05D002846 ORTHO05D002692 4.3e-09 65.5 179 35.2
CiPaw.11G185800 Carya illinoinensis HOM05D002846 ORTHO05D002692 7.3e-09 64.7 185 31.4
PSO210G5289 Papaver somniferum HOM05D002846 ORTHO05D002692 7.3e-09 64.7 184 33.7
VMungo1080G0378 Vigna mungo HOM05D002846 ORTHO05D002692 7.3e-09 64.7 195 34.4
Nitab4.5_0015723g0010 Nicotiana tabacum HOM05D002846 ORTHO05D002692 9.5e-09 64.3 167 32.9
TWI36G0639 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 9.5e-09 64.3 169 36.7
Cfa014424 Carpinus fangiana HOM05D002846 ORTHO05D002692 1.2e-08 63.9 171 33.3
Glyma.12G212900 Glycine max HOM05D002846 ORTHO05D002692 1.2e-08 63.9 157 35.0
CiPaw.04G116900 Carya illinoinensis HOM05D002846 ORTHO05D002692 1.6e-08 63.5 170 31.8
Dinv40727 Davidia involucrata HOM05D002846 ORTHO05D002692 1.6e-08 63.5 179 36.9
PGSC0003DMG400025494 Solanum tuberosum HOM05D002846 ORTHO05D002692 1.6e-08 63.5 172 34.3
TPR.G4595 Trifolium pratense HOM05D002846 ORTHO05D002692 1.6e-08 63.5 179 30.7
CSS0004659 Camellia sinensis var. sinensis HOM05D002846 ORTHO05D002692 2.1e-08 63.2 179 32.4
Ca_26241_v3 Cicer arietinum L. HOM05D002846 ORTHO05D002692 2.1e-08 63.2 182 33.5
Glyma.13G288700 Glycine max HOM05D002846 ORTHO05D002692 2.1e-08 63.2 157 33.8
MD17G1094800 Malus domestica HOM05D002846 ORTHO05D002692 2.1e-08 63.2 120 40.8
Phvul.005G114400 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 2.1e-08 63.2 186 30.6
Haze_12882 Corylus avellana HOM05D002846 ORTHO05D002692 2.8e-08 62.8 171 32.7
Gorai.005G150200 Gossypium raimondii HOM05D002846 ORTHO05D002692 2.8e-08 62.8 141 35.5
Peaxi162Scf00007g01016 Petunia axillaris HOM05D002846 ORTHO05D002692 2.8e-08 62.8 190 32.6
Thecc.07G046400 Theobroma cacao HOM05D002846 ORTHO05D002692 2.8e-08 62.8 170 34.7
DCAR_019769 Daucus carota HOM05D002846 ORTHO05D002692 3.6e-08 62.4 166 36.1
Gohir.A12G156600 Gossypium hirsutum HOM05D002846 ORTHO05D002692 3.6e-08 62.4 167 32.3
Manes.12G075700 Manihot esculenta HOM05D002846 ORTHO05D002692 6.2e-08 61.6 120 38.3
Medtr4g046870 Medicago truncatula HOM05D002846 ORTHO05D002692 6.2e-08 61.6 129 36.4
Potri.002G230300 Populus trichocarpa HOM05D002846 ORTHO05D002692 6.2e-08 61.6 98 44.9
MSTRG.14152 Avicennia marina HOM05D002846 ORTHO05D002692 8.1e-08 61.2 194 31.4
Atru.chr6.3164 Acer truncatum HOM05D002846 ORTHO05D002692 1.1e-07 60.8 195 33.3
Gohir.A01G076300 Gossypium hirsutum HOM05D002846 ORTHO05D002692 1.1e-07 60.8 181 30.4
Lalb_Chr24g0393141 Lupinus albus HOM05D002846 ORTHO05D002692 1.1e-07 60.8 119 38.7
RhsimUnG0010900 Rhododendron simsii HOM05D002846 ORTHO05D002692 1.1e-07 60.8 191 32.5
Glyma.13G308000 Glycine max HOM05D002846 ORTHO05D002692 1.4e-07 60.5 118 39.0
CsaV3_3G023230 Cucumis sativus L. HOM05D002846 ORTHO05D002692 1.8e-07 60.1 165 32.1
Prupe.3G218700 Prunus persica HOM05D002846 ORTHO05D002692 1.8e-07 60.1 194 30.4
C05p41700 Brassica napus HOM05D002846 ORTHO05D002692 2.3e-07 59.7 177 32.2
BolC5t32905H Brassica oleracea HOM05D002846 ORTHO05D002692 2.3e-07 59.7 177 32.2
Gohir.D01G063800 Gossypium hirsutum HOM05D002846 ORTHO05D002692 2.3e-07 59.7 178 29.2
Gorai.008G172600 Gossypium raimondii HOM05D002846 ORTHO05D002692 2.3e-07 59.7 167 31.1
Peaxi162Scf00462g00005 Petunia axillaris HOM05D002846 ORTHO05D002692 2.3e-07 59.7 170 31.8
Sopen05g027000 Solanum pennellii HOM05D002846 ORTHO05D002692 2.3e-07 59.7 144 34.7
Cpa.g.c34122 Carica papaya HOM05D002846 ORTHO05D002692 3.1e-07 59.3 155 35.5
Gorai.002G084300 Gossypium raimondii HOM05D002846 ORTHO05D002692 3.1e-07 59.3 181 29.8
TAR626G0168 Trochodendron aralioides HOM05D002846 ORTHO05D002692 3.1e-07 59.3 170 35.9
VMungo1080G0677 Vigna mungo HOM05D002846 ORTHO05D002692 3.1e-07 59.3 154 31.2
Gohir.D12G159433 Gossypium hirsutum HOM05D002846 ORTHO05D002692 4.0e-07 58.9 167 31.1
CARHR268130 Cardamine hirsuta HOM05D010845 ORTHO05D002692 5.2e-07 58.5 159 32.7
Lsat_1_v5_gn_8_128540 Lactuca sativa HOM05D002846 ORTHO05D002692 5.2e-07 58.5 193 27.5
Peaxi162Scf00407g00210 Petunia axillaris HOM05D002846 ORTHO05D002692 5.2e-07 58.5 163 35.6
Cc05_g04910 Coffea canephora HOM05D002846 ORTHO05D002692 6.8e-07 58.2 171 32.7
ECA233G0087 Erigeron canadensis HOM05D002846 ORTHO05D002692 6.8e-07 58.2 99 39.4
SalBow1G8286 Salvia bowleyana HOM05D002846 ORTHO05D002692 6.8e-07 58.2 179 29.6
Sp3g19720 Schrenkiella parvula HOM05D002846 ORTHO05D002692 6.8e-07 58.2 169 32.5
A05p27020 Brassica napus HOM05D002846 ORTHO05D002692 8.9e-07 57.8 181 30.9
BraA05t21588Z Brassica rapa HOM05D002846 ORTHO05D002692 8.9e-07 57.8 181 30.9
MELO3C018090.2 Cucumis melo HOM05D002846 ORTHO05D002692 8.9e-07 57.8 159 33.3
BcaB06g26277 Brassica carinata HOM05D002846 ORTHO05D002692 1.2e-06 57.4 181 29.8
CiPaw.12G127500 Carya illinoinensis HOM05D002846 ORTHO05D002692 1.2e-06 57.4 149 34.9
Dinv39698 Davidia involucrata HOM05D002846 ORTHO05D002692 1.5e-06 57.0 131 35.9
CANSAT64G1541 Cannabis sativa HOM05D002846 ORTHO05D002692 2.0e-06 56.6 200 32.0
Cfa020399 Carpinus fangiana HOM05D002846 ORTHO05D002692 2.0e-06 56.6 167 32.9
PGR083G2810 Punica granatum HOM05D002846 ORTHO05D002692 2.6e-06 56.2 171 34.5
BcaB04g20571 Brassica carinata HOM05D002846 ORTHO05D002692 3.4e-06 55.8 178 30.3
ClCG05G014610 Citrullus lanatus HOM05D002846 ORTHO05D002692 3.4e-06 55.8 163 33.1
ECA246G4222 Erigeron canadensis HOM05D002846 ORTHO05D002692 3.4e-06 55.8 166 30.1
FvH4_3g22010 Fragaria vesca HOM05D002846 ORTHO05D002692 3.4e-06 55.8 186 30.6
Nn1g03606 Nelumbo nucifera HOM05D002846 ORTHO05D002692 4.4e-06 55.5 119 38.7
Lj1A867G31 Lonicera japonica HOM05D002846 ORTHO05D002692 5.8e-06 55.1 131 38.2
MBI02_g23957_MAGBIO Magnolia biondii HOM05D002846 ORTHO05D002692 5.8e-06 55.1 124 37.9
Nitab4.5_0003509g0040 Nicotiana tabacum HOM05D002846 ORTHO05D002692 5.8e-06 55.1 171 31.6
Oeu041933.1 Olea europaea HOM05D002846 ORTHO05D002692 5.8e-06 55.1 174 31.0
FAN21G2316 Fragaria x ananassa HOM05D002846 ORTHO05D002692 7.6e-06 54.7 176 29.5


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