Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc01g0003530 Simmondsia chinensis HOM05D004502 ORTHO05D005579 0.0e+00 1494.6 757 100.0
Hund16660 Selenicereus undatus HOM05D004502 ORTHO05D005579 0.0e+00 1079.3 770 70.1
AUR62004387 Chenopodium quinoa HOM05D004502 ORTHO05D005579 7.2e-296 1020.4 767 66.1
GSVIVG01027000001 Vitis vinifera HOM05D004502 ORTHO05D005579 1.2e-290 1003.0 757 64.6
Dinv32500 Davidia involucrata HOM05D004502 ORTHO05D005579 2.7e-287 991.9 796 61.7
CiPaw.01G063800 Carya illinoinensis HOM05D004502 ORTHO05D005579 7.0e-275 950.7 760 61.7
Haze_15535 Corylus avellana HOM05D004502 ORTHO05D005579 4.5e-274 948.0 780 61.2
CSS0020518 Camellia sinensis var. sinensis HOM05D004502 ORTHO05D005579 1.3e-273 946.4 770 61.0
QL04p054124 Quercus lobata HOM05D004502 ORTHO05D005579 2.2e-273 945.7 752 61.7
TAR629G1389 Trochodendron aralioides HOM05D004502 ORTHO05D005579 5.0e-273 944.5 772 61.8
Atru.chr5.526 Acer truncatum HOM05D004502 ORTHO05D005579 1.9e-272 942.6 760 60.8
Ciclev10018851m.g Citrus clementina HOM05D004502 ORTHO05D005579 1.8e-270 936.0 760 60.4
Hma1.2p1_0071F.1_g037745 Hydrangea macrophylla HOM05D004502 ORTHO05D005579 2.3e-270 935.6 758 61.6
Potri.014G087300 Populus trichocarpa HOM05D004502 ORTHO05D005579 2.6e-269 932.2 759 61.0
Gohir.D11G095000 Gossypium hirsutum HOM05D004502 ORTHO05D005579 5.7e-269 931.0 753 61.9
Gorai.007G101400 Gossypium raimondii HOM05D004502 ORTHO05D005579 1.7e-268 929.5 753 61.8
Nn1g01586 Nelumbo nucifera HOM05D004502 ORTHO05D005579 2.8e-268 928.7 764 59.6
Actinidia14191 Actinidia chinensis HOM05D004502 ORTHO05D005579 4.8e-268 927.9 768 60.0
Cfa003897 Carpinus fangiana HOM05D004502 ORTHO05D005579 1.6e-266 922.9 751 60.9
Thecc.01G356300 Theobroma cacao HOM05D004502 ORTHO05D005579 1.7e-265 919.5 755 61.6
TWI23G1305 Tripterygium wilfordii HOM05D004502 ORTHO05D005579 2.2e-265 919.1 754 60.6
Actinidia20888 Actinidia chinensis HOM05D004502 ORTHO05D005579 2.9e-265 918.7 761 60.6
Cpa.g.sc11.33 Carica papaya HOM05D004502 ORTHO05D005579 3.8e-265 918.3 760 59.5
Gorai.004G159100 Gossypium raimondii HOM05D004502 ORTHO05D005579 7.2e-264 914.1 755 61.6
Sabra14G0063300 Salix brachista HOM05D004502 ORTHO05D005579 1.6e-263 912.9 794 57.4
Eucgr.E00113 Eucalyptus grandis HOM05D004502 ORTHO05D005579 1.4e-262 909.8 756 60.6
Cc02_g38300 Coffea canephora HOM05D004502 ORTHO05D005579 2.6e-261 905.6 754 58.2
Nn6g33342 Nelumbo nucifera HOM05D004502 ORTHO05D005579 3.4e-261 905.2 761 58.2
PGR042G2088 Punica granatum HOM05D004502 ORTHO05D005579 7.5e-261 904.0 758 61.2
Peaxi162Scf00020g01028 Petunia axillaris HOM05D004502 ORTHO05D005579 1.3e-260 903.3 754 58.5
Manes.01G254800 Manihot esculenta HOM05D004502 ORTHO05D005579 2.8e-260 902.1 743 61.4
Duzib133G0971 Durio zibethinus HOM05D004502 ORTHO05D005579 2.4e-259 899.0 787 59.6
HanXRQChr17g0562371 Helianthus annuus HOM05D004502 ORTHO05D005579 5.4e-259 897.9 758 57.5
RcHm_v2.0_Chr1g0356801 Rosa chinensis HOM05D004502 ORTHO05D005579 8.6e-257 890.6 773 56.4
FvH4_7g14850 Fragaria vesca HOM05D004502 ORTHO05D005579 2.5e-256 889.0 773 55.9
Glyma.09G257000 Glycine max HOM05D004502 ORTHO05D005579 1.2e-255 886.7 758 58.3
Medtr8g028875 Medicago truncatula HOM05D004502 ORTHO05D005579 3.6e-255 885.2 757 58.7
Lj9C585G14 Lonicera japonica HOM05D004502 ORTHO05D005579 8.0e-255 884.0 767 58.3
Glyma.07G068700 Glycine max HOM05D004502 ORTHO05D005579 1.4e-254 883.2 758 58.8
AUR62022593 Chenopodium quinoa HOM05D004502 ORTHO05D005579 4.0e-254 881.7 670 65.7
Rhsim07G0013000 Rhododendron simsii HOM05D004502 ORTHO05D005579 6.8e-254 880.9 759 58.4
Glyma.18G235400 Glycine max HOM05D004502 ORTHO05D005579 4.4e-253 878.2 758 57.4
VMungo1383G3442 Vigna mungo HOM05D004502 ORTHO05D005579 5.7e-253 877.9 758 58.3
Gohir.A11G090500 Gossypium hirsutum HOM05D004502 ORTHO05D005579 6.4e-252 874.4 753 59.4
FAN01G2073 Fragaria x ananassa HOM05D004502 ORTHO05D005579 1.4e-251 873.2 767 56.1
Lj3g0021790 Lotus japonicus HOM05D004502 ORTHO05D005579 9.2e-251 870.5 757 58.8
MD07G1133800 Malus domestica HOM05D004502 ORTHO05D005579 1.2e-250 870.2 763 57.7
CANSAT56G0477 Cannabis sativa HOM05D004502 ORTHO05D005579 2.3e-249 865.9 717 58.7
Duzib138G1080 Durio zibethinus HOM05D004502 ORTHO05D005579 2.3e-249 865.9 711 62.9
FAN10G2351 Fragaria x ananassa HOM05D004502 ORTHO05D005579 2.3e-249 865.9 767 55.3
VMungo0331G1775 Vigna mungo HOM05D004502 ORTHO05D005579 3.9e-249 865.1 759 57.2
Lsat_1_v5_gn_4_34660 Lactuca sativa HOM05D004502 ORTHO05D005579 5.0e-249 864.8 757 55.5
ECA234G4483 Erigeron canadensis HOM05D004502 ORTHO05D005579 6.6e-249 864.4 761 56.2
Sopen01g038640 Solanum pennellii HOM05D004502 ORTHO05D005579 8.6e-249 864.0 752 55.5
Solyc01g094860.4 Solanum lycopersicum HOM05D004502 ORTHO05D005579 1.1e-248 863.6 752 55.3
vmacro13259 Vaccinium macrocarpon HOM05D004502 ORTHO05D005579 1.5e-248 863.2 762 56.4
Psat3g107400 Pisum sativum HOM05D004502 ORTHO05D005579 1.9e-248 862.8 757 56.7
Phvul.008G060500 Phaseolus vulgaris HOM05D004502 ORTHO05D005579 3.3e-248 862.1 747 58.2
Phvul.010G100800 Phaseolus vulgaris HOM05D004502 ORTHO05D005579 5.6e-248 861.3 757 57.5
Lalb_Chr17g0339421 Lupinus albus HOM05D004502 ORTHO05D005579 1.8e-246 856.3 757 57.2
CAN.G78.100 Capsicum annuum HOM05D004502 ORTHO05D005579 2.3e-246 855.9 773 55.2
Oeu052960.2 Olea europaea HOM05D004502 ORTHO05D005579 1.2e-245 853.6 785 54.8
CsaV3_6G000710 Cucumis sativus L. HOM05D004502 ORTHO05D005579 3.4e-245 852.0 770 56.4
TPR.G37813 Trifolium pratense HOM05D004502 ORTHO05D005579 1.3e-244 850.1 759 55.9
FAN06G1095 Fragaria x ananassa HOM05D004502 ORTHO05D005579 8.3e-244 847.4 810 52.3
ECA236G0795 Erigeron canadensis HOM05D004502 ORTHO05D005579 1.4e-243 846.7 754 55.7
COL.COLO4_12736 Corchorus olitorius HOM05D004502 ORTHO05D005579 1.9e-243 846.3 682 63.0
arahy.Tifrunner.gnm1.ann1.V8X9PU Arachis hypogaea HOM05D004502 ORTHO05D005579 2.4e-243 845.9 767 55.8
arahy.Tifrunner.gnm1.ann1.0GN1Z3 Arachis hypogaea HOM05D004502 ORTHO05D005579 6.0e-242 841.3 764 55.5
FAN06G0667 Fragaria x ananassa HOM05D004502 ORTHO05D005579 4.3e-240 835.1 773 53.6
SalBow3G3684 Salvia bowleyana HOM05D004502 ORTHO05D005579 5.6e-240 834.7 761 53.5
Migut.B01778 Erythranthe guttata HOM05D004502 ORTHO05D005579 1.2e-239 833.6 754 53.7
TPR.G17909 Trifolium pratense HOM05D004502 ORTHO05D005579 2.8e-239 832.4 761 56.2
arahy.Tifrunner.gnm1.ann1.C1BLFK Arachis hypogaea HOM05D004502 ORTHO05D005579 4.7e-239 831.6 761 55.8
Sed0001889 Sechium edule HOM05D004502 ORTHO05D005579 2.3e-238 829.3 771 54.7
Sed0014632 Sechium edule HOM05D004502 ORTHO05D005579 5.2e-238 828.2 768 54.7
THA.LOC104802040 Tarenaya hassleriana HOM05D004502 ORTHO05D005579 1.5e-237 826.6 765 56.1
HanXRQChr06g0170231 Helianthus annuus HOM05D004502 ORTHO05D005579 6.4e-236 821.2 759 54.0
Aqoxy7G00260 Aquilegia oxysepala HOM05D004502 ORTHO05D005579 2.4e-235 819.3 786 53.8
PGSC0003DMG400000181 Solanum tuberosum HOM05D004502 ORTHO05D005579 5.4e-235 818.1 758 53.3
MSTRG.17285 Avicennia marina HOM05D004502 ORTHO05D005579 7.8e-234 814.3 764 53.1
Thhalv10001314m.g Eutrema salsugineum HOM05D004502 ORTHO05D005579 1.3e-233 813.5 758 54.1
Aa31LG1G27460 Aethionema arabicum HOM05D004502 ORTHO05D005579 6.6e-233 811.2 758 54.6
FAN10G2492 Fragaria x ananassa HOM05D004502 ORTHO05D005579 8.6e-233 810.8 767 52.8
AL4G45280 Arabidopsis lyrata HOM05D004502 ORTHO05D005579 1.2e-231 807.0 762 53.3
Carub.0004s2875 Capsella rubella HOM05D004502 ORTHO05D005579 3.6e-231 805.4 760 53.3
CARHR141310 Cardamine hirsuta HOM05D004502 ORTHO05D005579 1.1e-230 803.9 760 53.3
EL10Ac1g00390 Beta vulgaris HOM05D004502 ORTHO05D005579 1.8e-230 803.1 799 55.1
Sp4g28120 Schrenkiella parvula HOM05D004502 ORTHO05D005579 5.2e-230 801.6 761 53.5
Nitab4.5_0010258g0020 Nicotiana tabacum HOM05D004502 ORTHO05D005579 1.5e-229 800.0 760 53.3
ClCG06G003550 Citrullus lanatus HOM05D004502 ORTHO05D005579 2.6e-229 799.3 769 53.8
C04p06950 Brassica napus HOM05D004502 ORTHO05D005579 7.6e-229 797.7 761 53.1
BolC4t22316H Brassica oleracea HOM05D004502 ORTHO05D005579 7.6e-229 797.7 761 53.1
A05p06020 Brassica napus HOM05D004502 ORTHO05D005579 9.9e-229 797.3 760 53.4
BraA05t19565Z Brassica rapa HOM05D004502 ORTHO05D005579 2.9e-228 795.8 760 53.6
AT2G46060 Arabidopsis thaliana HOM05D004502 ORTHO05D005579 3.2e-227 792.3 760 52.8
arahy.Tifrunner.gnm1.ann1.04AGHE Arachis hypogaea HOM05D004502 ORTHO05D005579 2.1e-223 779.6 761 53.5
PSO478G3176 Papaver somniferum HOM05D004502 ORTHO05D005579 1.1e-222 777.3 757 53.0
A04p34250 Brassica napus HOM05D004502 ORTHO05D005579 1.4e-222 776.9 760 52.6
PSO782G3525 Papaver somniferum HOM05D004502 ORTHO05D005579 5.2e-222 775.0 759 53.1
BraA04t18886Z Brassica rapa HOM05D004502 ORTHO05D005579 6.9e-222 774.6 760 52.2
C04p72070 Brassica napus HOM05D004502 ORTHO05D005579 1.1e-219 767.3 759 51.4
Ca_23605_v3 Cicer arietinum L. HOM05D004502 ORTHO05D005579 1.0e-217 760.8 660 57.6
SGA_v2.0_scaffold95G28821 Striga asiatica HOM05D004502 ORTHO05D005579 1.0e-217 760.8 754 50.8
Rhsim01G0146800 Rhododendron simsii HOM05D004502 ORTHO05D005579 5.1e-217 758.4 775 51.6
Prupe.2G173600 Prunus persica HOM05D004502 ORTHO05D005579 2.1e-215 753.1 649 57.0
Gohir.D08G153200 Gossypium hirsutum HOM05D004502 ORTHO05D005579 3.8e-212 742.3 618 60.8
Ca_00829_v3 Cicer arietinum L. HOM05D004502 ORTHO05D005579 3.5e-210 735.7 651 54.8
Os10g0446200 Oryza sativa ssp. japonica HOM05D004502 ORTHO05D005579 6.4e-204 714.9 795 46.3
Nitab4.5_0000583g0350 Nicotiana tabacum HOM05D004502 ORTHO05D005579 1.9e-203 713.4 669 53.7
HPP92_022633 Vanilla planifolia HOM05D004502 ORTHO05D005579 1.2e-202 710.7 786 45.9
ATR0680G297 Amborella trichopoda HOM05D004502 ORTHO05D005579 4.0e-198 695.7 815 45.0
vmacro20915 Vaccinium macrocarpon HOM05D004502 ORTHO05D005579 3.4e-197 692.6 575 57.9
Psat4g212960 Pisum sativum HOM05D004502 ORTHO05D005579 2.8e-191 672.9 619 54.6
MBI18_g32047_MAGBIO Magnolia biondii HOM05D004502 ORTHO05D005579 2.7e-186 656.4 880 43.3
QL12p032431 Quercus lobata HOM05D004502 ORTHO05D005579 2.7e-186 656.4 754 44.7
TWI60G0172 Tripterygium wilfordii HOM05D004502 ORTHO05D005579 1.0e-180 637.9 749 44.5
MELO3C021198.2 Cucumis melo HOM05D004502 ORTHO05D005579 8.8e-177 624.8 516 57.9
Zm00001eb222430 Zea mays HOM05D004502 ORTHO05D005579 2.0e-173 613.6 692 47.3
COL.COLO4_34496 Corchorus olitorius HOM05D004502 ORTHO05D005579 3.4e-173 612.8 730 44.7
SHI13432 Sapria himalayana HOM05D004502 ORTHO05D005579 1.1e-166 591.3 711 44.6
Ah.05g180370 Amaranthus hybridus HOM05D004502 ORTHO05D005579 1.7e-164 583.9 520 56.9
MD01G1067200 Malus domestica HOM05D004502 ORTHO05D005579 5.2e-161 572.4 540 51.9
Aqoxy7G00261 Aquilegia oxysepala HOM05D004502 ORTHO05D005579 9.4e-155 551.6 660 46.7
FAN03G0719 Fragaria x ananassa HOM05D004502 ORTHO05D005579 9.4e-155 551.6 720 42.1
DCAR_008618 Daucus carota HOM05D004502 ORTHO05D005579 1.5e-144 517.7 385 64.4
TAR375G0606 Trochodendron aralioides HOM05D004502 ORTHO05D005579 1.6e-133 481.1 391 59.1
Gohir.A08G131800 Gossypium hirsutum HOM05D004502 ORTHO05D005579 1.0e-132 478.4 342 68.1
AUR62010714 Chenopodium quinoa HOM05D004502 ORTHO05D005579 6.6e-124 449.1 722 36.0
Glyma.16G034551 Glycine max HOM05D004502 ORTHO05D005579 6.6e-124 449.1 339 64.9
Haze_08811 Corylus avellana HOM05D004502 ORTHO05D005579 3.4e-104 383.6 622 36.3
Gohir.A08G131900 Gossypium hirsutum HOM05D004502 ORTHO05D005579 4.6e-101 373.2 364 54.9
Mapoly0035s0107 Marchantia polymorpha HOM05D004502 ORTHO05D005579 2.4e-97 360.9 789 30.4
unitig_26.g9298 Utricularia gibba HOM05D004502 ORTHO05D005579 4.6e-93 346.7 320 53.4
Pp3c10_11170 Physcomitrium patens HOM05D004502 ORTHO05D005579 1.3e-87 328.6 824 28.3
CDE06G0820 Ceratophyllum demersum HOM05D004502 ORTHO05D005579 2.9e-87 327.4 350 45.1
Hund14837 Selenicereus undatus HOM05D004502 ORTHO05D005579 2.7e-85 320.9 456 39.0
unitig_26.g9297 Utricularia gibba HOM05D004502 ORTHO05D005579 9.0e-81 305.8 399 41.6
Glyma.16G034476 Glycine max HOM05D004502 ORTHO05D005579 1.3e-74 285.4 307 49.2
SEGI_07374 Sequoiadendron giganteum HOM05D004502 ORTHO05D005579 6.3e-74 283.1 511 32.7
Cc08_g14990 Coffea canephora HOM05D004502 ORTHO05D005579 1.0e-71 275.8 303 48.2
COL.COLO4_28934 Corchorus olitorius HOM05D004502 ORTHO05D005579 1.9e-54 218.4 200 56.0
vmacro20916 Vaccinium macrocarpon HOM05D004502 ORTHO05D005579 2.3e-52 211.5 178 65.2
MELO3C021197.2 Cucumis melo HOM05D004502 ORTHO05D005579 1.3e-50 205.7 223 51.6
MD01G1067000 Malus domestica HOM05D004502 ORTHO05D005579 9.4e-46 189.5 179 58.7
CBR_g17145 Chara braunii HOM05D004502 ORTHO05D005579 7.5e-27 126.7 113 43.4
MELO3C031211.2 Cucumis melo HOM05D004502 ORTHO05D005579 2.0e-24 118.6 142 47.9
Hund14845 Selenicereus undatus HOM05D004502 ORTHO05D005579 2.0e-24 118.6 112 55.4
TPR.G24958 Trifolium pratense HOM05D004502 ORTHO05D005579 2.3e-20 105.1 114 48.2
CDE06G0272 Ceratophyllum demersum HOM05D004502 ORTHO05D005579 3.7e-18 97.8 102 57.8
SEGI_31877 Sequoiadendron giganteum HOM05D004502 ORTHO05D005579 3.6e-13 81.3 62 51.6
MELO3C034807.2 Cucumis melo HOM05D004502 ORTHO05D011879 2.2e-10 72.0 104 40.4
arahy.Tifrunner.gnm1.ann1.R57FTB Arachis hypogaea HOM05D004502 ORTHO05D002623 8.3e-10 70.1 57 59.6
Hund14846 Selenicereus undatus HOM05D004502 ORTHO05D005579 2.3e-07 62.0 43 53.5
Hund14838 Selenicereus undatus HOM05D004502 ORTHO05D005579 5.1e-07 60.8 83 37.3
Thecc.03G282200 Theobroma cacao HOM05D004502 ORTHO05D005579 4.3e-06 57.8 54 46.3


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