Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc01g0003240 Simmondsia chinensis HOM05D004687 ORTHO05D006002 0.0e+00 1127.1 585 100.0
TAR374G1208 Trochodendron aralioides HOM05D004687 ORTHO05D006002 2.3e-148 530.0 600 52.3
Dinv32519 Davidia involucrata HOM05D004687 ORTHO05D006002 4.6e-141 505.8 591 51.4
CANSAT56G3669 Cannabis sativa HOM05D004687 ORTHO05D006002 5.3e-137 492.3 599 51.3
GSVIVG01026963001 Vitis vinifera HOM05D004687 ORTHO05D006002 1.7e-135 487.3 587 50.8
CiPaw.02G034500 Carya illinoinensis HOM05D004687 ORTHO05D006002 6.0e-133 478.8 590 49.2
Hund27243 Selenicereus undatus HOM05D004687 ORTHO05D006002 4.3e-131 472.6 583 49.4
Lj7A508T42 Lonicera japonica HOM05D004687 ORTHO05D006002 7.6e-128 461.8 587 49.2
Nitab4.5_0000915g0140 Nicotiana tabacum HOM05D004687 ORTHO05D006002 2.1e-125 453.8 600 48.2
Sabra14G0065300 Salix brachista HOM05D004687 ORTHO05D006002 1.3e-124 451.1 565 48.8
Manes.01G252600 Manihot esculenta HOM05D004687 ORTHO05D006002 3.9e-124 449.5 587 48.6
Nn1g01677 Nelumbo nucifera HOM05D004687 ORTHO05D006002 6.7e-124 448.7 589 48.7
Aqoxy7G00187 Aquilegia oxysepala HOM05D004687 ORTHO05D006002 2.1e-122 443.7 613 45.7
Atru.chr5.577 Acer truncatum HOM05D004687 ORTHO05D006002 4.8e-122 442.6 593 46.4
Oeu063679.1 Olea europaea HOM05D004687 ORTHO05D006002 2.4e-121 440.3 593 48.1
Cc02_g38540 Coffea canephora HOM05D004687 ORTHO05D006002 3.1e-121 439.9 598 47.2
Atru.chr5.560 Acer truncatum HOM05D004687 ORTHO05D006002 4.0e-121 439.5 593 45.9
CSS0026327 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 9.0e-121 438.3 585 46.7
COL.COLO4_12774 Corchorus olitorius HOM05D004687 ORTHO05D006002 1.3e-119 434.5 593 47.0
Lj3g0008911 Lotus japonicus HOM05D004687 ORTHO05D006002 3.8e-119 433.0 589 46.2
Solyc01g095090.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 3.8e-119 433.0 586 47.6
Duzib138G0011 Durio zibethinus HOM05D004687 ORTHO05D006002 6.0e-117 425.6 600 45.2
Thecc.01G352900 Theobroma cacao HOM05D004687 ORTHO05D006002 6.0e-117 425.6 590 46.6
Peaxi162Scf00020g01410 Petunia axillaris HOM05D004687 ORTHO05D006002 1.0e-116 424.9 590 45.8
Gohir.D11G097000 Gossypium hirsutum HOM05D004687 ORTHO05D006002 1.3e-116 424.5 586 48.1
Phvul.010G104100 Phaseolus vulgaris HOM05D004687 ORTHO05D006002 1.3e-116 424.5 594 45.5
Gorai.007G103300 Gossypium raimondii HOM05D004687 ORTHO05D006002 1.8e-116 424.1 586 47.8
Cfa003875 Carpinus fangiana HOM05D004687 ORTHO05D006002 5.1e-116 422.5 564 47.3
Glyma.16G032000 Glycine max HOM05D004687 ORTHO05D006002 1.9e-115 420.6 611 43.7
PGSC0003DMG400000194 Solanum tuberosum HOM05D004687 ORTHO05D006002 1.9e-115 420.6 639 44.0
QL04p055402 Quercus lobata HOM05D004687 ORTHO05D006002 3.3e-115 419.9 712 42.0
Lalb_Chr10g0096671 Lupinus albus HOM05D004687 ORTHO05D006002 4.3e-115 419.5 591 46.2
VMungo0331G0070 Vigna mungo HOM05D004687 ORTHO05D006002 4.3e-115 419.5 601 44.9
Potri.014G089800 Populus trichocarpa HOM05D004687 ORTHO05D006002 7.4e-115 418.7 547 47.7
MSTRG.20861 Avicennia marina HOM05D004687 ORTHO05D006002 9.6e-115 418.3 591 46.2
PSO478G3840 Papaver somniferum HOM05D004687 ORTHO05D006002 3.7e-114 416.4 606 45.0
Cpa.g.sc184.31 Carica papaya HOM05D004687 ORTHO05D006002 4.8e-114 416.0 596 46.1
Eucgr.D02323 Eucalyptus grandis HOM05D004687 ORTHO05D006002 8.2e-114 415.2 588 45.7
arahy.Tifrunner.gnm1.ann1.PSKN5N Arachis hypogaea HOM05D004687 ORTHO05D006002 5.3e-113 412.5 604 43.7
arahy.Tifrunner.gnm1.ann1.X9JZY0 Arachis hypogaea HOM05D004687 ORTHO05D006002 2.0e-112 410.6 601 43.4
Medtr8g028580 Medicago truncatula HOM05D004687 ORTHO05D006002 1.0e-111 408.3 579 43.4
Prupe.2G177100 Prunus persica HOM05D004687 ORTHO05D006002 1.3e-111 407.9 591 44.8
TWI14G1112 Tripterygium wilfordii HOM05D004687 ORTHO05D006002 2.2e-111 407.1 597 44.6
Ca_03498_v3 Cicer arietinum L. HOM05D004687 ORTHO05D006002 3.2e-110 403.3 584 44.3
Migut.B01796 Erythranthe guttata HOM05D004687 ORTHO05D006002 3.2e-110 403.3 591 45.0
Psat4g212240 Pisum sativum HOM05D004687 ORTHO05D006002 3.2e-110 403.3 589 44.1
Ciclev10019565m.g Citrus clementina HOM05D004687 ORTHO05D006002 5.5e-110 402.5 592 43.9
MBI04_g26968_MAGBIO Magnolia biondii HOM05D004687 ORTHO05D006002 2.3e-108 397.1 600 44.8
Sed0003221 Sechium edule HOM05D004687 ORTHO05D006002 3.0e-108 396.7 587 44.5
AUR62004410 Chenopodium quinoa HOM05D004687 ORTHO05D006002 3.9e-108 396.4 585 44.8
PSO266G0021 Papaver somniferum HOM05D004687 ORTHO05D006002 8.7e-108 395.2 609 43.2
ClCG06G003410 Citrullus lanatus HOM05D004687 ORTHO05D006002 2.2e-106 390.6 586 44.5
Nitab4.5_0009238g0010 Nicotiana tabacum HOM05D004687 ORTHO05D006002 2.2e-106 390.6 598 44.8
DCAR_006947 Daucus carota HOM05D004687 ORTHO05D006002 2.9e-103 380.2 560 44.3
PGR031G1931 Punica granatum HOM05D004687 ORTHO05D006002 8.5e-103 378.6 601 42.9
RcHm_v2.0_Chr1g0357651 Rosa chinensis HOM05D004687 ORTHO05D006002 7.9e-101 372.1 607 43.3
Rhsim07G0010800 Rhododendron simsii HOM05D004687 ORTHO05D006002 3.0e-100 370.2 634 39.7
Ah.05g180180 Amaranthus hybridus HOM05D004687 ORTHO05D006002 3.9e-100 369.8 296 66.2
FvH4_7g15320 Fragaria vesca HOM05D004687 ORTHO05D006002 1.3e-98 364.8 611 42.2
FAN06G2065 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.3e-98 364.8 611 42.2
Peaxi162Scf00403g00830 Petunia axillaris HOM05D004687 ORTHO05D006002 6.3e-98 362.5 521 44.7
FAN06G2774 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.1e-97 361.7 611 42.1
CSS0036615 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 2.4e-97 360.5 541 43.3
MD01G1070600 Malus domestica HOM05D004687 ORTHO05D006002 6.9e-97 359.0 591 40.6
THA.LOC104817038 Tarenaya hassleriana HOM05D004687 ORTHO05D006002 1.2e-96 358.2 578 41.7
FAN10G0227 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.5e-96 357.8 611 41.6
Lsat_1_v5_gn_7_3881 Lactuca sativa HOM05D004687 ORTHO05D006002 2.0e-96 357.5 602 40.9
AUR62022616 Chenopodium quinoa HOM05D004687 ORTHO05D006002 7.7e-96 355.5 514 45.3
PGSC0003DMG400033881 Solanum tuberosum HOM05D004687 ORTHO05D006002 3.6e-93 346.7 522 44.4
MELO3C021180.2 Cucumis melo HOM05D004687 ORTHO05D006002 3.0e-92 343.6 617 41.7
SalBow3G3455 Salvia bowleyana HOM05D004687 ORTHO05D006002 3.9e-92 343.2 638 39.2
EL10Ac1g00358 Beta vulgaris HOM05D004687 ORTHO05D006002 6.7e-92 342.4 567 42.5
Solyc05g050020.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 8.8e-92 342.0 519 43.5
Sopen05g028410 Solanum pennellii HOM05D004687 ORTHO05D006002 2.0e-91 340.9 519 43.0
TPR.G28289 Trifolium pratense HOM05D004687 ORTHO05D006002 9.7e-91 338.6 559 42.8
AT4G01270 Arabidopsis thaliana HOM05D004687 ORTHO05D006002 1.7e-90 337.8 579 39.9
Thhalv10029490m.g Eutrema salsugineum HOM05D004687 ORTHO05D006002 6.3e-90 335.9 579 40.1
ATR0661G462 Amborella trichopoda HOM05D004687 ORTHO05D006002 1.1e-89 335.1 603 41.5
Actinidia20159 Actinidia chinensis HOM05D004687 ORTHO05D006002 1.8e-89 334.3 598 39.3
Haze_15561 Corylus avellana HOM05D004687 ORTHO05D006002 1.8e-89 334.3 594 41.1
Carub.0006s3633 Capsella rubella HOM05D004687 ORTHO05D006002 3.1e-89 333.6 581 40.3
Sp6g00860 Schrenkiella parvula HOM05D004687 ORTHO05D006002 9.1e-89 332.0 585 39.7
BcaC01g06853 Brassica carinata HOM05D004687 ORTHO05D006002 1.0e-87 328.6 582 41.4
C03p38970 Brassica napus HOM05D004687 ORTHO05D006002 1.0e-87 328.6 583 39.3
CSS0021310 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 1.3e-87 328.2 541 41.2
A03p31950 Brassica napus HOM05D004687 ORTHO05D006002 1.7e-87 327.8 580 39.8
Aa31LG5G750 Aethionema arabicum HOM05D004687 ORTHO05D006002 2.9e-87 327.0 588 39.5
AL6G52120 Arabidopsis lyrata HOM05D004687 ORTHO05D006002 2.9e-87 327.0 587 39.7
BolC3t16169H Brassica oleracea HOM05D004687 ORTHO05D006002 2.9e-87 327.0 582 41.4
BraA03t12367Z Brassica rapa HOM05D004687 ORTHO05D006002 3.8e-87 326.6 582 40.2
CARHR249040 Cardamine hirsuta HOM05D004687 ORTHO05D006002 1.2e-85 321.6 585 40.2
ECA236G1242 Erigeron canadensis HOM05D004687 ORTHO05D006002 2.1e-85 320.9 582 39.3
CSS0041346 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 1.0e-84 318.5 487 42.7
A09p00090 Brassica napus HOM05D004687 ORTHO05D006002 2.3e-84 317.4 583 38.8
BcaC04g24137 Brassica carinata HOM05D004687 ORTHO05D006002 1.1e-83 315.1 583 39.8
C09p00700 Brassica napus HOM05D004687 ORTHO05D006002 1.1e-83 315.1 583 39.8
BolC9t53004H Brassica oleracea HOM05D004687 ORTHO05D006002 1.1e-83 315.1 583 39.8
BcaB01g02150 Brassica carinata HOM05D004687 ORTHO05D006002 1.5e-83 314.7 580 39.3
BraA09t35739Z Brassica rapa HOM05D004687 ORTHO05D006002 1.5e-83 314.7 585 39.5
FAN10G4173 Fragaria x ananassa HOM05D004687 ORTHO05D006002 2.2e-82 310.8 611 39.0
SGA_v2.0_scaffold95G28807 Striga asiatica HOM05D004687 ORTHO05D006002 1.4e-81 308.1 608 36.0
unitig_699.g19806 Utricularia gibba HOM05D004687 ORTHO05D006002 1.2e-80 305.1 616 37.7
SEGI_33633 Sequoiadendron giganteum HOM05D004687 ORTHO05D006002 4.2e-78 296.6 590 38.1
HanXRQChr04g0120761 Helianthus annuus HOM05D004687 ORTHO05D006002 5.5e-78 296.2 586 37.2
Zm00001eb416420 Zea mays HOM05D004687 ORTHO05D006002 1.2e-77 295.0 612 37.4
HanXRQChr06g0170331 Helianthus annuus HOM05D004687 ORTHO05D006002 2.8e-74 283.9 581 36.3
vmacro13232 Vaccinium macrocarpon HOM05D004687 ORTHO05D006002 8.3e-74 282.3 294 53.4
Os08g0151700 Oryza sativa ssp. japonica HOM05D004687 ORTHO05D006002 2.4e-73 280.8 607 35.1
Prupe.2G177000 Prunus persica HOM05D004687 ORTHO05D006002 5.5e-70 269.6 500 37.2
BcaB01g02289 Brassica carinata HOM05D004687 ORTHO05D006002 4.0e-68 263.5 580 34.5
MD01G1070500 Malus domestica HOM05D004687 ORTHO05D006002 5.7e-67 259.6 506 36.6
Gohir.A11G092200 Gossypium hirsutum HOM05D004687 ORTHO05D006002 7.5e-67 259.2 442 43.4
CsaV3_6G000900 Cucumis sativus L. HOM05D004687 ORTHO05D006002 6.3e-66 256.1 497 39.8
FAN01G0098 Fragaria x ananassa HOM05D004687 ORTHO05D006002 2.9e-63 247.3 502 39.8
Lalb_Chr17g0339021 Lupinus albus HOM05D004687 ORTHO05D006002 3.4e-59 233.8 227 56.8
FvH4_1g19860 Fragaria vesca HOM05D004687 ORTHO05D006002 5.6e-54 216.5 269 47.6
FAN19G0767 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.6e-53 214.9 269 47.2
FAN28G2978 Fragaria x ananassa HOM05D004687 ORTHO05D006002 4.0e-52 210.3 269 46.1
RcHm_v2.0_Chr2g0111671 Rosa chinensis HOM05D004687 ORTHO05D006002 6.8e-52 209.5 266 45.1
Nitab4.5_0002262g0080 Nicotiana tabacum HOM05D004687 ORTHO05D006002 4.4e-51 206.8 509 34.2
FAN26G2006 Fragaria x ananassa HOM05D004687 ORTHO05D006002 9.8e-51 205.7 269 46.5
Pp3c23_12760 Physcomitrium patens HOM05D004687 ORTHO05D006002 1.4e-49 201.8 630 31.3
SGA_v2.0_scaffold95G28804 Striga asiatica HOM05D004687 ORTHO05D006002 5.4e-49 199.9 284 44.0
SMO147G0044 Selaginella moellendorffii HOM05D004687 ORTHO05D006002 2.7e-48 197.6 279 43.0
FAN03G2011 Fragaria x ananassa HOM05D004687 ORTHO05D006002 7.8e-48 196.1 427 38.6
CDE11G0743 Ceratophyllum demersum HOM05D002440 ORTHO05D002576 5.6e-46 189.9 434 36.4
Potri.002G164000 Populus trichocarpa HOM05D004687 ORTHO05D006002 3.5e-40 170.6 342 38.3
Nitab4.5_0003779g0080 Nicotiana tabacum HOM05D004687 ORTHO05D006002 7.3e-38 162.9 477 31.4
vmacro13233 Vaccinium macrocarpon HOM05D004687 ORTHO05D006002 9.2e-33 146.0 140 53.6
Lalb_Chr17g0339031 Lupinus albus HOM05D004687 ORTHO05D006002 4.6e-32 143.7 369 33.6
FAN23G1626 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.3e-31 142.1 271 38.0
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 1.3e-31 142.1 122 56.6
Sopen01g038880 Solanum pennellii HOM05D004687 ORTHO05D006002 5.6e-30 136.7 327 35.2
SHI13366 Sapria himalayana HOM05D004687 ORTHO05D006002 1.2e-29 135.6 158 48.7
MD01G1071100 Malus domestica HOM05D004687 ORTHO05D006002 2.4e-28 131.3 100 65.0
SHI13367 Sapria himalayana HOM05D004687 ORTHO05D006002 1.5e-27 128.6 420 30.0
Actinidia20138 Actinidia chinensis HOM05D004687 ORTHO05D006002 3.4e-27 127.5 110 58.2
CBR_g45680 Chara braunii HOM05D004687 ORTHO05D006002 1.7e-26 125.2 295 30.2
QL06p033484 Quercus lobata HOM05D004687 ORTHO05D006002 1.1e-25 122.5 111 49.5
Aa31sc194G60 Aethionema arabicum HOM05D004687 ORTHO05D006002 1.3e-23 115.5 136 51.5
Actinidia10067 Actinidia chinensis HOM05D004687 ORTHO05D006002 3.1e-20 104.4 382 30.4
COL.COLO4_21921 Corchorus olitorius HOM05D004687 ORTHO05D006002 4.9e-18 97.1 122 41.0
Mapoly0091s0017 Marchantia polymorpha HOM05D004687 ORTHO05D006002 6.4e-18 96.7 297 28.6
ATR0804G028 Amborella trichopoda HOM05D004687 ORTHO05D006002 1.1e-17 95.9 130 45.4
PSO541G1518 Papaver somniferum HOM05D004687 ORTHO05D006002 1.9e-14 85.1 133 38.3
SGA_v2.0_scaffold95G28808 Striga asiatica HOM05D005821 ORTHO05D006649 1.9e-14 85.1 101 47.5
Ca_03421_v3 Cicer arietinum L. HOM05D004687 ORTHO05D006002 6.7e-07 60.1 126 35.7
AT4G01245 Arabidopsis thaliana HOM05D004687 ORTHO05D006002 1.9e-06 58.5 60 56.7


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