Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc01g0003060 Simmondsia chinensis HOM05D001461 ORTHO05D005534 1.2e-61 239.6 117 100.0
AUR62004435 Chenopodium quinoa HOM05D001461 ORTHO05D005534 7.7e-48 193.7 115 77.4
AUR62023513 Chenopodium quinoa HOM05D001461 ORTHO05D005534 7.7e-48 193.7 115 77.4
EL10Ac1g00327 Beta vulgaris HOM05D001461 ORTHO05D005534 1.3e-47 193.0 115 78.3
Dinv32542 Davidia involucrata HOM05D001461 ORTHO05D005534 5.0e-47 191.0 117 77.8
TWI18G0300 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 1.6e-45 186.0 116 75.9
TWI60G0303 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 3.6e-45 184.9 116 75.0
PGR042G3251 Punica granatum HOM05D001461 ORTHO05D005534 6.1e-45 184.1 117 73.5
Atru.chr9.2071 Acer truncatum HOM05D001461 ORTHO05D005534 1.0e-44 183.3 116 75.9
Lalb_Chr09g0332711 Lupinus albus HOM05D001461 ORTHO05D005534 1.0e-44 183.3 115 76.5
CSS0041928 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 1.4e-44 183.0 116 74.1
Manes.02G014100 Manihot esculenta HOM05D001461 ORTHO05D005534 1.8e-44 182.6 116 74.1
FvH4_5g03750 Fragaria vesca HOM05D001461 ORTHO05D005534 3.0e-44 181.8 116 75.0
FAN04G2189 Fragaria x ananassa HOM05D001461 ORTHO05D002801 3.0e-44 181.8 116 75.0
FAN08G0967 Fragaria x ananassa HOM05D001461 ORTHO05D005534 3.0e-44 181.8 116 75.0
Actinidia10093 Actinidia chinensis HOM05D001461 ORTHO05D005534 4.0e-44 181.4 117 72.6
MSTRG.20880 Avicennia marina HOM05D001461 ORTHO05D005534 5.2e-44 181.0 116 75.9
Migut.E01260 Erythranthe guttata HOM05D001461 ORTHO05D005534 1.2e-43 179.9 116 75.0
Medtr5g009740 Medicago truncatula HOM05D001461 ORTHO05D005534 1.2e-43 179.9 117 74.4
Prupe.1G460500 Prunus persica HOM05D001461 ORTHO05D005534 1.2e-43 179.9 116 72.4
RcHm_v2.0_Chr6g0304921 Rosa chinensis HOM05D001461 ORTHO05D005534 1.2e-43 179.9 116 73.3
arahy.Tifrunner.gnm1.ann1.Z0SXD6 Arachis hypogaea HOM05D001461 ORTHO05D005534 1.5e-43 179.5 117 73.5
Potri.003G135100 Populus trichocarpa HOM05D001461 ORTHO05D005534 1.5e-43 179.5 116 75.0
Hma1.2p1_0384F.1_g140900 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 2.0e-43 179.1 117 74.4
Nitab4.5_0002026g0080 Nicotiana tabacum HOM05D001461 ORTHO05D005534 2.6e-43 178.7 117 72.6
FAN13G1856 Fragaria x ananassa HOM05D001461 ORTHO05D005534 3.4e-43 178.3 116 73.3
RcHm_v2.0_Chr7g0195901 Rosa chinensis HOM05D001461 ORTHO05D005534 3.4e-43 178.3 116 72.4
CANSAT21G0685 Cannabis sativa HOM05D001461 ORTHO05D005534 4.4e-43 177.9 117 74.4
Peaxi162Scf00029g02519 Petunia axillaris HOM05D001461 ORTHO05D005534 4.4e-43 177.9 117 72.6
Hma1.2p1_0397F.1_g143760 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 5.7e-43 177.6 115 73.9
Glyma.01G223800 Glycine max HOM05D001461 ORTHO05D005534 7.5e-43 177.2 117 70.9
Solyc11g062280.2 Solanum lycopersicum HOM05D001461 ORTHO05D005534 7.5e-43 177.2 117 72.6
Sopen11g024260 Solanum pennellii HOM05D001461 ORTHO05D005534 7.5e-43 177.2 117 72.6
PGSC0003DMG401032495 Solanum tuberosum HOM05D001461 ORTHO05D005534 7.5e-43 177.2 117 72.6
SGA_v2.0_scaffold4G02266 Striga asiatica HOM05D001461 ORTHO05D005534 7.5e-43 177.2 116 74.1
TPR.G6688 Trifolium pratense HOM05D001461 ORTHO05D005534 7.5e-43 177.2 117 72.6
CiPaw.12G086700 Carya illinoinensis HOM05D001461 ORTHO05D005534 9.8e-43 176.8 116 74.1
FAN13G2166 Fragaria x ananassa HOM05D001461 ORTHO05D005534 9.8e-43 176.8 116 73.3
GSVIVG01019462001 Vitis vinifera HOM05D001461 ORTHO05D002801 9.8e-43 176.8 117 72.6
arahy.Tifrunner.gnm1.ann1.PFJ4ZJ Arachis hypogaea HOM05D001461 ORTHO05D005534 1.3e-42 176.4 117 72.6
PGSC0003DMG400007048 Solanum tuberosum HOM05D001461 ORTHO05D005534 1.3e-42 176.4 117 71.8
MBI07_g06330_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 1.7e-42 176.0 115 75.7
MD15G1108200 Malus domestica HOM05D001461 ORTHO05D005534 2.2e-42 175.6 116 72.4
SGA_v2.0_scaffold95G28797 Striga asiatica HOM05D001461 ORTHO05D005534 2.2e-42 175.6 116 72.4
COL.COLO4_21750 Corchorus olitorius HOM05D001461 ORTHO05D005534 2.8e-42 175.3 116 70.7
Nn7g37350 Nelumbo nucifera HOM05D001461 ORTHO05D005534 2.8e-42 175.3 115 71.3
MBI15_g19879_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 3.7e-42 174.9 115 74.8
CAN.G375.83 Capsicum annuum HOM05D001461 ORTHO05D005534 4.8e-42 174.5 117 71.8
Migut.B01819 Erythranthe guttata HOM05D001461 ORTHO05D005534 4.8e-42 174.5 116 72.4
Cc03_g08310 Coffea canephora HOM05D001461 ORTHO05D005534 6.3e-42 174.1 119 75.6
DCAR_025235 Daucus carota HOM05D001461 ORTHO05D005534 6.3e-42 174.1 116 71.6
FAN18G4081 Fragaria x ananassa HOM05D001461 ORTHO05D005534 1.1e-41 173.3 115 70.4
HanXRQChr04g0120651 Helianthus annuus HOM05D001461 ORTHO05D005534 1.1e-41 173.3 116 69.8
Psat2g033040 Pisum sativum HOM05D001461 ORTHO05D005534 1.1e-41 173.3 115 72.2
Eucgr.E00823 Eucalyptus grandis HOM05D001461 ORTHO05D005534 1.4e-41 172.9 117 71.8
Prupe.5G111900 Prunus persica HOM05D001461 ORTHO05D005534 1.4e-41 172.9 118 72.9
Thecc.03G290500 Theobroma cacao HOM05D001461 ORTHO05D005534 1.4e-41 172.9 116 71.6
Glyma.11G019700 Glycine max HOM05D001461 ORTHO05D005534 1.8e-41 172.6 118 69.5
Lsat_1_v5_gn_7_2481 Lactuca sativa HOM05D001461 ORTHO05D005534 1.8e-41 172.6 114 70.2
LjContig00312_ERROPOS870357g0027559 Lotus japonicus HOM05D001461 ORTHO05D005534 1.8e-41 172.6 117 70.9
Sabra03G0097400 Salix brachista HOM05D001461 ORTHO05D005534 5.4e-41 171.0 127 67.7
Thecc.02G012600 Theobroma cacao HOM05D001461 ORTHO05D005534 5.4e-41 171.0 112 71.4
Duzib084G0256 Durio zibethinus HOM05D001461 ORTHO05D005534 7.0e-41 170.6 116 70.7
ECA236G4284 Erigeron canadensis HOM05D001461 ORTHO05D005534 7.0e-41 170.6 116 69.8
SalBow3G1410 Salvia bowleyana HOM05D001461 ORTHO05D005534 7.0e-41 170.6 117 73.5
VMungo1215G2099 Vigna mungo HOM05D001461 ORTHO05D005534 9.1e-41 170.2 118 70.3
Gohir.A12G232000 Gossypium hirsutum HOM05D001461 ORTHO05D005534 1.2e-40 169.9 117 69.2
Gohir.D12G235300 Gossypium hirsutum HOM05D001461 ORTHO05D005534 1.2e-40 169.9 117 69.2
Gorai.008G251500 Gossypium raimondii HOM05D001461 ORTHO05D005534 1.2e-40 169.9 117 69.2
Phvul.002G161800 Phaseolus vulgaris HOM05D001461 ORTHO05D005534 1.2e-40 169.9 118 70.3
MELO3C008160.2 Cucumis melo HOM05D001461 ORTHO05D005534 2.7e-40 168.7 117 71.8
CsaV3_2G033880 Cucumis sativus L. HOM05D001461 ORTHO05D005534 2.7e-40 168.7 117 71.8
CARHR046740 Cardamine hirsuta HOM05D001461 ORTHO05D005534 3.5e-40 168.3 114 71.1
Thhalv10023764m.g Eutrema salsugineum HOM05D001461 ORTHO05D005534 3.5e-40 168.3 116 70.7
LjContig00001g0001336 Lotus japonicus HOM05D001461 ORTHO05D005534 3.5e-40 168.3 119 69.7
LjContig00001g0023327 Lotus japonicus HOM05D001461 ORTHO05D005534 3.5e-40 168.3 119 69.7
ClCG11G007680 Citrullus lanatus HOM05D001461 ORTHO05D005534 4.5e-40 167.9 117 71.8
ECA233G4373 Erigeron canadensis HOM05D001461 ORTHO05D005534 4.5e-40 167.9 119 69.7
BcaB07g31442 Brassica carinata HOM05D001461 ORTHO05D005534 5.9e-40 167.5 116 69.8
BcaB07g31521 Brassica carinata HOM05D001461 ORTHO05D005534 5.9e-40 167.5 116 69.8
A09p14930 Brassica napus HOM05D001461 ORTHO05D005534 5.9e-40 167.5 116 69.8
BraA09t37138Z Brassica rapa HOM05D001461 ORTHO05D005534 5.9e-40 167.5 116 69.8
unitig_62.g23802 Utricularia gibba HOM05D001461 ORTHO05D005534 7.7e-40 167.2 128 66.4
Aqoxy6G01758 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 1.0e-39 166.8 113 71.7
BcaC04g22537 Brassica carinata HOM05D001461 ORTHO05D005534 1.7e-39 166.0 116 69.0
A09p14170 Brassica napus HOM05D001461 ORTHO05D005534 1.7e-39 166.0 116 69.0
C09p18050 Brassica napus HOM05D001461 ORTHO05D005534 1.7e-39 166.0 116 69.0
BolC9t54702H Brassica oleracea HOM05D001461 ORTHO05D005534 1.7e-39 166.0 116 69.0
BraA09t37065Z Brassica rapa HOM05D001461 ORTHO05D005534 1.7e-39 166.0 116 69.0
Carub.0002s0062 Capsella rubella HOM05D001461 ORTHO05D005534 1.7e-39 166.0 116 69.8
Aqoxy6G01756 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 2.3e-39 165.6 113 71.7
PSO384G4702 Papaver somniferum HOM05D001461 ORTHO05D005534 2.9e-39 165.2 121 66.9
Aa31LG2G1220 Aethionema arabicum HOM05D001461 ORTHO05D002801 3.8e-39 164.9 116 69.0
C09p17080 Brassica napus HOM05D001461 ORTHO05D005534 5.0e-39 164.5 116 68.1
BolC9t54606H Brassica oleracea HOM05D001461 ORTHO05D005534 5.0e-39 164.5 116 68.1
AT5G41650 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 6.6e-39 164.1 115 70.4
CARHR212880 Cardamine hirsuta HOM05D001461 ORTHO05D005534 6.6e-39 164.1 113 70.8
Thhalv10027655m.g Eutrema salsugineum HOM05D001461 ORTHO05D002801 6.6e-39 164.1 114 71.1
ATR0580G205 Amborella trichopoda HOM05D001461 ORTHO05D005534 1.9e-38 162.5 113 70.8
Sed0013897 Sechium edule HOM05D001461 ORTHO05D005534 1.9e-38 162.5 116 69.8
AT1G64185 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 3.3e-38 161.8 116 67.2
AL2G10830 Arabidopsis lyrata HOM05D001461 ORTHO05D005534 9.5e-38 160.2 116 67.2
CSS0015159 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 1.6e-37 159.5 98 78.6
CSS0025412 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 1.6e-37 159.5 98 78.6
Sed0026937 Sechium edule HOM05D001461 ORTHO05D005534 2.8e-37 158.7 117 67.5
Sc01g0010020 Simmondsia chinensis HOM05D001461 ORTHO05D005534 3.6e-37 158.3 117 65.8
Os06g0158700 Oryza sativa ssp. japonica HOM05D001461 ORTHO05D005534 1.0e-36 156.8 116 66.4
Zm00001eb376190 Zea mays HOM05D001461 ORTHO05D005534 1.0e-36 156.8 117 66.7
Zm00001eb376220 Zea mays HOM05D001461 ORTHO05D005534 1.0e-36 156.8 117 66.7
Zm00001eb376310 Zea mays HOM05D001461 ORTHO05D005534 1.0e-36 156.8 117 66.7
Zm00001eb376350 Zea mays HOM05D001461 ORTHO05D005534 1.0e-36 156.8 118 66.1
Zm00001eb376910 Zea mays HOM05D001461 ORTHO05D005534 1.0e-36 156.8 117 66.7
Zm00001eb376940 Zea mays HOM05D001461 ORTHO05D005534 1.0e-36 156.8 117 66.7
Lsat_1_v5_gn_5_108040 Lactuca sativa HOM05D001461 ORTHO05D005534 4.0e-36 154.8 113 66.4
Zm00001eb376260 Zea mays HOM05D001461 ORTHO05D005534 5.2e-36 154.5 117 65.8
SEGI_29517 Sequoiadendron giganteum HOM05D001461 ORTHO05D005534 8.9e-36 153.7 117 60.7
Rhsim07G0008500 Rhododendron simsii HOM05D001461 ORTHO05D005534 1.5e-35 152.9 167 52.1
Lj4g0014781 Lotus japonicus HOM05D001461 ORTHO05D005534 9.8e-35 150.2 117 65.8
BcaC04g22646 Brassica carinata HOM05D001461 ORTHO05D005534 3.7e-34 148.3 132 59.1
Hund27230 Selenicereus undatus HOM05D001461 ORTHO05D005534 6.3e-34 147.5 100 72.0
Nitab4.5_0000492g0140 Nicotiana tabacum HOM05D001461 ORTHO05D005534 1.1e-33 146.7 99 71.7
Carub.0007s3383 Capsella rubella HOM05D001461 ORTHO05D005534 1.8e-33 146.0 115 66.1
SMO364G0470 Selaginella moellendorffii HOM05D001461 ORTHO05D005534 2.4e-33 145.6 114 58.8
FvH4_5g27350 Fragaria vesca HOM05D001461 ORTHO05D005534 1.6e-32 142.9 97 70.1
TPR.G32972 Trifolium pratense HOM05D001461 ORTHO05D005534 1.6e-32 142.9 96 72.9
HPP92_002836 Vanilla planifolia HOM05D001461 ORTHO05D005534 2.0e-32 142.5 101 66.3
AagrBONN_evm.TU.Sc2ySwM_344.4522 Anthoceros agrestis HOM05D001461 ORTHO05D005534 7.8e-32 140.6 112 58.9
Lj4g0009029 Lotus japonicus HOM05D001461 ORTHO05D005534 1.3e-31 139.8 119 62.2
FAN28G0268 Fragaria x ananassa HOM05D001461 ORTHO05D005534 1.7e-31 139.4 103 64.1
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 1.7e-31 139.4 100 68.0
Pp3c1_2350 Physcomitrium patens HOM05D001461 ORTHO05D005534 2.3e-31 139.0 110 57.3
Nitab4.5_0004629g0090 Nicotiana tabacum HOM05D001461 ORTHO05D005534 2.5e-30 135.6 121 59.5
Migut.E01261 Erythranthe guttata HOM05D001461 ORTHO05D005534 5.6e-30 134.4 97 71.1
Mapoly0143s0026 Marchantia polymorpha HOM05D001461 ORTHO05D005534 7.5e-27 124.0 115 50.4
Ah.07g196880 Amaranthus hybridus HOM05D001461 ORTHO05D005534 4.9e-26 121.3 98 62.2
MD08G1128900 Malus domestica HOM05D001461 ORTHO05D005534 1.9e-25 119.4 94 64.9
Oeu054373.3 Olea europaea HOM05D000540 ORTHO05D000681 7.3e-22 107.5 64 78.1
FAN13G0962 Fragaria x ananassa HOM05D001461 ORTHO05D005534 2.1e-21 105.9 64 75.0
arahy.Tifrunner.gnm1.ann1.F4HMTZ Arachis hypogaea HOM05D001461 ORTHO05D005534 6.2e-21 104.4 66 78.8
Ciclev10022889m.g Citrus clementina HOM05D001461 ORTHO05D005534 1.4e-20 103.2 64 76.6
arahy.Tifrunner.gnm1.ann1.NAT0LD Arachis hypogaea HOM05D001461 ORTHO05D005534 5.2e-20 101.3 64 78.1
Lj9C594G4 Lonicera japonica HOM05D001461 ORTHO05D005534 5.2e-20 101.3 68 70.6
vmacro13208 Vaccinium macrocarpon HOM05D001461 ORTHO05D005534 8.9e-20 100.5 78 61.5
RcHm_v2.0_Chr5g0061641 Rosa chinensis HOM05D001461 ORTHO05D005534 2.6e-19 99.0 60 75.0
Glyma.06G264500 Glycine max HOM05D001461 ORTHO05D005534 1.7e-18 96.3 109 46.8
Zm00001eb376250 Zea mays HOM05D001461 ORTHO05D005534 1.1e-17 93.6 59 72.9
Zm00001eb376320 Zea mays HOM05D001461 ORTHO05D005534 1.9e-17 92.8 116 44.0
Glyma.05G213500 Glycine max HOM05D001461 ORTHO05D005534 2.4e-17 92.4 61 70.5
Oeu063667.1 Olea europaea HOM05D001461 ORTHO05D005534 2.7e-16 89.0 57 71.9
MCO07G452 Micromonas commoda HOM05D001461 ORTHO05D005534 1.3e-15 86.7 131 38.9
PRCOL_00003773 Prasinoderma coloniale HOM05D001461 ORTHO05D005534 6.6e-15 84.3 137 36.5
arahy.Tifrunner.gnm1.ann1.2LVS12 Arachis hypogaea HOM05D001461 ORTHO05D005534 1.9e-14 82.8 54 72.2
Actinidia28489 Actinidia chinensis HOM05D001461 ORTHO05D005534 2.1e-13 79.3 117 38.5
MD08G1130100 Malus domestica HOM05D001461 ORTHO05D005534 6.2e-13 77.8 89 53.9
QL02p032078 Quercus lobata HOM05D001461 ORTHO05D005534 2.3e-12 75.9 52 69.2
MD14G1117200 Malus domestica HOM05D001461 ORTHO05D005534 3.4e-11 72.0 51 64.7
Cfa012281 Carpinus fangiana HOM05D001461 ORTHO05D005534 7.5e-11 70.9 50 68.0
Solyc07g061860.3 Solanum lycopersicum HOM05D001461 ORTHO05D051078 7.8e-08 60.8 72 44.4
Sopen07g030150 Solanum pennellii HOM05D018748 ORTHO05D009630 3.0e-07 58.9 35 80.0


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