Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 0.0e+00 1179.1 592 100.0
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 2.3e-204 716.1 561 65.1
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 4.9e-199 698.4 556 64.0
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 3.3e-171 605.9 567 57.1
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 6.9e-145 518.5 566 49.5
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 5.5e-142 508.8 543 50.1
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 9.4e-142 508.1 568 47.5
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 2.1e-141 506.9 571 47.8
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 7.9e-141 505.0 596 46.0
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 3.9e-140 502.7 568 47.4
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 1.5e-139 500.7 571 47.3
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 1.7e-138 497.3 585 47.9
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 2.4e-137 493.4 563 47.2
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 2.0e-136 490.3 581 47.0
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 2.9e-135 486.5 562 46.4
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 2.5e-134 483.4 562 48.9
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 9.4e-134 481.5 591 46.4
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 1.6e-133 480.7 572 48.4
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.8e-132 477.2 576 46.9
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 8.8e-132 474.9 559 48.8
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 1.1e-131 474.6 592 44.4
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 3.3e-131 473.0 576 46.7
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 4.8e-130 469.2 570 46.5
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 2.4e-129 466.8 563 45.8
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 2.4e-129 466.8 560 47.1
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 1.2e-128 464.5 564 45.4
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 1.3e-127 461.1 575 43.7
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 3.8e-127 459.5 578 45.2
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 6.5e-127 458.8 572 44.6
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 8.5e-127 458.4 594 43.9
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 3.2e-126 456.4 570 44.4
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 3.2e-126 456.4 403 58.3
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 9.4e-126 454.9 576 44.4
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 1.6e-125 454.1 572 44.4
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 6.1e-125 452.2 568 45.8
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 2.3e-124 450.3 575 44.2
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 3.0e-124 449.9 575 44.3
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 3.0e-124 449.9 577 44.4
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 8.8e-124 448.4 574 44.1
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 5.7e-123 445.7 576 45.0
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 7.0e-121 438.7 566 44.5
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 1.2e-120 438.0 578 44.1
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 1.6e-120 437.6 565 45.5
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 1.6e-120 437.6 514 46.5
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 2.0e-120 437.2 564 44.1
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 3.5e-120 436.4 585 43.6
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 7.7e-120 435.3 566 42.9
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 3.8e-119 433.0 600 42.5
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 2.5e-118 430.3 581 43.5
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 3.6e-117 426.4 584 43.2
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 2.3e-116 423.7 568 43.3
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 3.0e-116 423.3 568 42.8
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 4.0e-116 422.9 590 42.5
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 2.0e-115 420.6 562 43.8
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 7.5e-115 418.7 564 43.4
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 7.5e-115 418.7 568 43.8
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 2.2e-114 417.2 570 43.7
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 4.8e-114 416.0 511 45.4
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 1.1e-113 414.8 573 43.1
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 3.5e-112 409.8 574 42.2
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 1.3e-111 407.9 445 49.7
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 6.5e-111 405.6 575 40.0
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 1.1e-110 404.8 570 42.8
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 1.9e-110 404.1 572 42.7
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 7.2e-110 402.1 579 41.5
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 9.4e-110 401.7 576 41.7
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 1.2e-109 401.4 606 41.9
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 2.1e-109 400.6 559 41.5
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 4.0e-108 396.4 567 42.3
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 5.2e-108 396.0 561 42.2
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 1.5e-107 394.4 557 42.5
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 6.3e-106 389.0 579 40.6
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 1.1e-105 388.3 575 41.0
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 4.1e-105 386.3 573 39.3
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 4.5e-104 382.9 563 40.7
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 1.3e-103 381.3 571 40.8
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 1.2e-101 374.8 564 40.4
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 1.6e-101 374.4 586 39.6
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 3.6e-101 373.2 560 40.0
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 1.4e-100 371.3 555 39.6
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 6.8e-100 369.0 561 39.6
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 1.5e-99 367.9 561 39.4
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 1.1e-97 361.7 558 39.8
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 7.0e-97 359.0 558 39.8
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 4.6e-96 356.3 556 39.4
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 1.3e-95 354.8 558 39.2
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 1.3e-95 354.8 556 39.7
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 1.3e-95 354.8 556 39.7
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 8.3e-90 335.5 590 35.9
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 9.5e-86 322.0 423 43.0
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 1.6e-85 321.2 457 41.6
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 2.1e-85 320.9 598 35.6
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 3.6e-85 320.1 536 38.2
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 8.9e-84 315.5 418 43.1
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 1.9e-78 297.7 353 47.0
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 2.1e-77 294.3 416 41.1
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 1.1e-73 282.0 448 38.8
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 1.2e-72 278.5 441 39.9
Phvul.003G257166 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 6.6e-55 219.5 223 51.1
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 9.6e-54 215.7 626 29.6
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 1.1e-52 212.2 229 45.4
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 1.3e-45 188.7 471 29.5
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 1.7e-42 178.3 604 26.8
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 1.8e-39 168.3 189 47.6
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 1.4e-36 158.7 131 59.5
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 6.9e-36 156.4 568 25.5
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 1.1e-30 139.0 466 25.5
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 7.7e-27 126.3 139 46.8
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 9.4e-25 119.4 129 48.8
SEGI_05601 Sequoiadendron giganteum HOM05D006531 ORTHO05D007905 1.6e-24 118.6 338 29.9
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 6.1e-24 116.7 190 38.4
TAR376G0395 Trochodendron aralioides HOM05D006531 ORTHO05D007905 1.1e-20 105.9 139 41.7
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 4.1e-20 104.0 159 40.3
Lj2g0008134 Lotus japonicus HOM05D006531 ORTHO05D007905 4.5e-19 100.5 151 43.0
MSTRG.2488 Avicennia marina HOM05D006531 ORTHO05D007905 4.4e-14 84.0 75 57.3
Sc07g0000850 Simmondsia chinensis HOM05D006531 ORTHO05D007905 1.7e-10 72.0 74 51.4
CDE06G1394 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 5.2e-07 60.5 75 42.7
CBR_g8866 Chara braunii HOM05D006531 ORTHO05D007905 5.2e-07 60.5 78 33.3
RcHm_v2.0_Chr4g0390451 Rosa chinensis HOM05D006531 ORTHO05D007905 9.7e-06 56.2 41 61.0


User provided reference genes

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