Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 3.9e-70 268.1 143 100.0
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 4.0e-46 188.3 140 72.1
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 2.2e-44 182.6 140 71.4
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 2.8e-44 182.2 140 69.3
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 6.3e-44 181.0 140 70.0
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 8.3e-44 180.6 140 70.0
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 8.3e-44 180.6 140 67.1
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 7.0e-43 177.6 140 65.7
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 1.0e-41 173.7 136 68.4
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 1.3e-41 173.3 140 65.0
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 1.7e-41 172.9 140 65.7
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 1.7e-41 172.9 140 65.7
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 3.8e-41 171.8 140 63.6
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 6.5e-41 171.0 140 63.6
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 8.6e-41 170.6 136 66.9
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 1.1e-40 170.2 140 63.6
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 1.1e-40 170.2 140 62.1
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 1.9e-40 169.5 136 65.4
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 1.9e-40 169.5 140 62.9
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 2.5e-40 169.1 139 64.0
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 3.3e-40 168.7 140 62.9
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 5.5e-40 167.9 140 62.9
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 5.5e-40 167.9 140 63.6
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 7.2e-40 167.5 140 62.1
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 9.5e-40 167.2 140 62.1
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 2.1e-39 166.0 155 56.8
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 2.8e-39 165.6 140 62.1
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 2.8e-39 165.6 137 63.5
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 4.7e-39 164.9 135 65.2
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 4.7e-39 164.9 139 63.3
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 4.7e-39 164.9 135 65.2
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 8.0e-39 164.1 140 60.7
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 1.0e-38 163.7 138 63.0
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 1.0e-38 163.7 140 60.7
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 1.4e-38 163.3 138 62.3
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 1.4e-38 163.3 138 61.6
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 1.4e-38 163.3 140 62.1
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 1.4e-38 163.3 135 64.4
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 2.3e-38 162.5 140 60.0
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 6.8e-38 161.0 136 63.2
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 6.8e-38 161.0 139 60.4
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 8.9e-38 160.6 139 60.4
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.2e-37 160.2 135 62.2
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 1.2e-37 160.2 137 60.6
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 2.6e-37 159.1 138 60.1
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 2.6e-37 159.1 138 60.1
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 2.6e-37 159.1 140 60.0
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 3.4e-37 158.7 139 61.9
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 4.4e-37 158.3 136 61.0
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 5.7e-37 157.9 135 61.5
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 7.5e-37 157.5 139 58.3
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 9.8e-37 157.1 140 60.0
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 6.3e-36 154.5 137 58.4
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 1.4e-35 153.3 134 58.2
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 1.4e-35 153.3 137 56.9
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 1.8e-35 152.9 134 57.5
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 2.4e-35 152.5 137 58.4
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 2.4e-35 152.5 137 59.9
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 4.1e-35 151.8 124 66.1
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 7.0e-35 151.0 134 57.5
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 7.0e-35 151.0 137 57.7
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 1.6e-34 149.8 139 57.6
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 1.6e-34 149.8 139 57.6
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 1.6e-34 149.8 139 57.6
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 3.5e-34 148.7 134 56.0
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 3.5e-34 148.7 134 57.5
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 3.5e-34 148.7 134 56.0
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 4.5e-34 148.3 139 56.8
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 5.9e-34 147.9 138 55.1
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 5.9e-34 147.9 139 56.1
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 7.8e-34 147.5 134 56.0
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 1.3e-33 146.7 139 56.8
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 1.3e-33 146.7 137 55.5
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 1.3e-33 146.7 139 54.0
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 2.3e-33 146.0 134 55.2
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 2.3e-33 146.0 134 55.2
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 2.3e-33 146.0 134 55.2
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 2.3e-33 146.0 134 55.2
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 3.8e-33 145.2 139 56.1
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 8.6e-33 144.1 137 53.3
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 1.9e-32 142.9 137 55.5
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 1.2e-31 140.2 131 54.2
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 2.1e-31 139.4 140 49.3
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 2.8e-31 139.0 139 49.6
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 8.0e-31 137.5 133 51.9
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 8.0e-31 137.5 140 52.1
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 1.8e-30 136.3 131 52.7
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 2.3e-30 136.0 119 59.7
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 4.0e-30 135.2 138 49.3
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 8.9e-30 134.0 90 75.6
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 1.3e-28 130.2 90 72.2
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 2.9e-28 129.0 172 44.8
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 2.9e-28 129.0 89 73.0
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.8e-27 126.3 96 68.8
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.8e-27 126.3 95 69.5
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 3.2e-27 125.6 117 53.8
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 2.0e-26 122.9 130 50.0
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 3.9e-25 118.6 103 57.3
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 6.6e-25 117.9 91 64.8
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 1.5e-24 116.7 87 66.7
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 1.9e-24 116.3 90 64.4
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 5.6e-24 114.8 95 60.0
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 7.3e-24 114.4 98 59.2
Migut.M00617 Erythranthe guttata HOM05D007012 ORTHO05D008882 3.6e-23 112.1 138 50.0
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 6.2e-23 111.3 140 47.9
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 4.0e-22 108.6 86 61.6
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 1.5e-21 106.7 134 44.8
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 5.8e-21 104.8 119 47.9
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 1.7e-20 103.2 123 44.7
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 1.7e-20 103.2 139 42.4
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 1.5e-16 90.1 101 46.5
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 8.1e-15 84.3 51 72.5


User provided reference genes

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