Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 3.8e-157 558.1 285 100.0
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 4.6e-94 348.6 276 70.3
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 1.0e-93 347.4 240 74.6
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 4.7e-83 312.0 282 59.9
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 3.1e-82 309.3 278 59.4
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 1.1e-79 300.8 270 59.3
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 5.4e-79 298.5 271 59.0
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 6.0e-78 295.0 269 59.5
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 5.1e-77 292.0 274 58.4
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 9.6e-76 287.7 278 56.8
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.8e-74 283.5 269 57.2
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 6.9e-74 281.6 280 55.4
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 9.0e-74 281.2 223 64.1
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 1.2e-73 280.8 223 65.9
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 2.0e-73 280.0 277 55.6
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 1.7e-72 276.9 229 61.1
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 2.2e-72 276.6 192 69.8
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 2.2e-72 276.6 287 53.0
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 8.4e-72 274.6 191 69.6
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 1.9e-71 273.5 274 52.2
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 3.2e-71 272.7 255 57.3
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 1.2e-70 270.8 218 64.2
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 1.2e-70 270.8 224 62.5
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 3.0e-69 266.2 176 72.7
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 3.0e-69 266.2 271 55.7
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 6.6e-69 265.0 192 69.8
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 8.7e-69 264.6 195 67.7
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 1.9e-68 263.5 275 51.6
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 2.5e-68 263.1 213 62.0
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 2.5e-68 263.1 213 62.0
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 3.3e-68 262.7 253 56.9
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 5.6e-68 261.9 201 66.7
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 5.6e-68 261.9 213 62.0
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 5.6e-68 261.9 225 62.2
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 9.6e-68 261.2 199 66.8
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 9.6e-68 261.2 201 65.7
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 1.3e-67 260.8 225 59.6
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 1.6e-67 260.4 279 52.3
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 1.6e-67 260.4 225 60.4
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 1.6e-67 260.4 254 55.9
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 2.1e-67 260.0 245 54.7
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 2.8e-67 259.6 272 52.6
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 4.8e-67 258.8 267 54.3
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 1.8e-66 256.9 208 61.5
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 2.4e-66 256.5 215 58.1
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 2.4e-66 256.5 187 67.4
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 5.3e-66 255.4 286 51.7
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 1.2e-65 254.2 210 59.5
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 1.2e-65 254.2 220 59.5
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 1.5e-65 253.8 213 60.6
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 2.0e-65 253.4 193 64.2
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 2.0e-65 253.4 213 59.6
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 2.6e-65 253.1 213 62.0
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 2.6e-65 253.1 260 53.5
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 3.4e-65 252.7 194 63.9
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 3.4e-65 252.7 212 61.3
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 3.4e-65 252.7 212 61.3
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 3.4e-65 252.7 227 57.3
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 7.6e-65 251.5 196 64.3
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 9.9e-65 251.1 192 64.6
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 1.3e-64 250.8 278 52.2
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 1.7e-64 250.4 227 56.8
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 2.2e-64 250.0 242 54.1
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 2.9e-64 249.6 272 51.5
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 2.9e-64 249.6 190 63.7
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 2.9e-64 249.6 218 58.3
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 2.9e-64 249.6 213 60.6
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 3.8e-64 249.2 214 60.7
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 6.4e-64 248.4 219 60.7
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 6.4e-64 248.4 167 71.3
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 8.4e-64 248.1 196 62.8
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 1.9e-63 246.9 215 58.1
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 5.4e-63 245.4 288 48.3
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 7.1e-63 245.0 238 54.6
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 9.3e-63 244.6 182 65.4
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 2.7e-62 243.0 280 51.1
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 3.5e-62 242.7 278 48.9
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 6.0e-62 241.9 247 52.2
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.0e-61 241.1 170 68.2
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 3.0e-61 239.6 172 69.2
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 3.9e-61 239.2 186 63.4
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 6.7e-61 238.4 232 54.7
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 1.1e-60 237.7 215 54.9
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 1.9e-60 236.9 210 56.7
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 3.3e-60 236.1 195 61.0
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 5.6e-60 235.3 252 52.8
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 7.4e-60 235.0 191 60.2
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 7.4e-60 235.0 189 63.0
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 1.1e-58 231.1 186 62.4
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 4.5e-57 225.7 215 53.0
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 7.6e-57 224.9 195 55.9
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 1.7e-56 223.8 214 55.1
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 9.3e-55 218.0 198 57.6
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 1.6e-54 217.2 218 54.6
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 7.9e-54 214.9 244 49.6
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 1.0e-53 214.5 187 57.8
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 1.6e-51 207.2 158 65.2
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 1.1e-50 204.5 169 59.8
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 3.1e-50 203.0 179 58.7
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 1.1e-47 194.5 188 53.7
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 1.1e-42 177.9 138 63.8
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 1.1e-36 157.9 178 44.9
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 5.3e-34 149.1 198 39.4
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 1.9e-31 140.6 214 40.2
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 5.3e-26 122.5 182 40.1
ClCG11G006020 Citrullus lanatus HOM05D000215 ORTHO05D008904 3.6e-06 56.6 157 29.3
SMO364G0870 Selaginella moellendorffii HOM05D000716 ORTHO05D004822 6.1e-06 55.8 186 25.8


User provided reference genes

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