Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow8G4233 Salvia bowleyana HOM05D007760 ORTHO05D008337 2.5e-137 492.3 275 100.0
MSTRG.24243 Avicennia marina HOM05D007760 ORTHO05D008337 3.8e-53 212.6 305 54.1
Migut.N03163 Erythranthe guttata HOM05D007760 ORTHO05D008337 3.1e-47 193.0 290 47.2
MSTRG.1190 Avicennia marina HOM05D007760 ORTHO05D008337 1.1e-44 184.5 298 46.0
Oeu046271.1 Olea europaea HOM05D007760 ORTHO05D008337 2.0e-38 163.7 281 45.2
SGA_v2.0_scaffold11G05919 Striga asiatica HOM05D007760 ORTHO05D008337 2.5e-36 156.8 307 42.3
Oeu027538.2 Olea europaea HOM05D007760 ORTHO05D008337 1.9e-33 147.1 298 41.9
Migut.C00840 Erythranthe guttata HOM05D007760 ORTHO05D008337 1.6e-32 144.1 301 39.9
SalBow7G2592 Salvia bowleyana HOM05D007760 ORTHO05D008337 2.6e-30 136.7 290 41.0
SGA_v2.0_scaffold47G17496 Striga asiatica HOM05D007760 ORTHO05D008337 2.0e-25 120.6 291 39.9
Sopen04g035090 Solanum pennellii HOM05D021694 ORTHO05D008337 5.3e-23 112.5 272 40.4
Solyc04g081480.3 Solanum lycopersicum HOM05D021694 ORTHO05D008337 6.9e-23 112.1 272 40.4
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 1.2e-22 111.3 307 36.5
Nitab4.5_0009651g0030 Nicotiana tabacum HOM05D007760 ORTHO05D008337 3.4e-22 109.8 263 38.4
RhsimUnG0065900 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.0e-21 108.2 304 37.5
Dinv39521 Davidia involucrata HOM05D007760 ORTHO05D008337 2.5e-20 103.6 174 44.8
Nitab4.5_0000192g0190 Nicotiana tabacum HOM05D021694 ORTHO05D008337 5.5e-20 102.4 265 36.2
Peaxi162Scf00438g00084 Petunia axillaris HOM05D021694 ORTHO05D008337 7.9e-19 98.6 259 36.3
RhsimUnG0066000 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.0e-18 98.2 305 35.1
TAR625G0557 Trochodendron aralioides HOM05D007760 ORTHO05D008337 1.4e-18 97.8 212 36.8
Phvul.009G017200 Phaseolus vulgaris HOM05D007760 ORTHO05D008337 3.3e-17 93.2 198 41.4
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.7e-16 90.9 310 35.8
Actinidia15424 Actinidia chinensis HOM05D007760 ORTHO05D008337 2.8e-16 90.1 294 34.0
Nitab4.5_0025981g0010 Nicotiana tabacum HOM05D007760 ORTHO05D008337 3.7e-16 89.7 163 40.5
Medtr1g025290 Medicago truncatula HOM05D007760 ORTHO05D008337 6.3e-16 89.0 248 32.7
TPR.G20837 Trifolium pratense HOM05D007760 ORTHO05D008337 1.4e-15 87.8 309 29.8
VMungo1309G0539 Vigna mungo HOM05D007760 ORTHO05D008337 5.3e-15 85.9 193 37.8
Rhsim07G0247700 Rhododendron simsii HOM05D007760 ORTHO05D008337 9.1e-15 85.1 175 42.9
Dinv31848 Davidia involucrata HOM05D007760 ORTHO05D008337 1.6e-14 84.3 294 32.0
Lalb_Chr23g0266151 Lupinus albus HOM05D007760 ORTHO05D008337 3.5e-14 83.2 280 33.2
TAR381G0719 Trochodendron aralioides HOM05D007760 ORTHO05D008337 1.7e-13 80.9 223 35.0
Glyma.04G024000 Glycine max HOM05D007760 ORTHO05D008337 2.2e-13 80.5 177 37.9
SGA_v2.0_scaffold35G14252 Striga asiatica HOM05D007760 ORTHO05D008337 8.5e-13 78.6 167 38.9
Ciclev10001832m.g Citrus clementina HOM05D007760 ORTHO05D008337 1.1e-12 78.2 295 29.5
Gorai.010G004000 Gossypium raimondii HOM05D007760 ORTHO05D008337 3.2e-12 76.6 253 30.8
SGA_v2.0_scaffold390G50602 Striga asiatica HOM05D007760 ORTHO05D008337 3.2e-12 76.6 124 49.2
Manes.18G013300 Manihot esculenta HOM05D007760 ORTHO05D008337 4.2e-12 76.3 165 37.0
Psat6g002760 Pisum sativum HOM05D007760 ORTHO05D008337 5.5e-12 75.9 84 50.0
Potri.005G239800 Populus trichocarpa HOM05D007760 ORTHO05D008337 5.5e-12 75.9 198 34.8
Lj1g0003650 Lotus japonicus HOM05D007760 ORTHO05D008337 7.2e-12 75.5 191 34.0
Duzib116G0858 Durio zibethinus HOM05D007760 ORTHO05D008337 1.2e-11 74.7 182 37.9
Gohir.A06G003800 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.6e-11 74.3 250 30.4
Lalb_Chr11g0061901 Lupinus albus HOM05D007760 ORTHO05D008337 1.6e-11 74.3 187 38.0
Psat6g002560 Pisum sativum HOM05D007760 ORTHO05D008337 1.6e-11 74.3 177 36.2
Eucgr.F00585 Eucalyptus grandis HOM05D007760 ORTHO05D008337 3.6e-11 73.2 79 55.7
Gorai.010G004100 Gossypium raimondii HOM05D007760 ORTHO05D008337 3.6e-11 73.2 275 30.2
Prupe.1G364900 Prunus persica HOM05D015458 ORTHO05D008337 4.7e-11 72.8 119 38.7
MBI05_g33714_MAGBIO Magnolia biondii HOM05D007760 ORTHO05D008337 6.1e-11 72.4 290 31.0
Cpa.g.sc26.48 Carica papaya HOM05D007760 ORTHO05D008337 8.0e-11 72.0 169 33.7
Glyma.06G024200 Glycine max HOM05D007760 ORTHO05D008337 8.0e-11 72.0 197 35.0
Duzib041G0564 Durio zibethinus HOM05D007760 ORTHO05D008337 1.0e-10 71.6 163 37.4
Gohir.D06G006700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.4e-10 71.2 258 29.8
Sabra05G0185300 Salix brachista HOM05D007760 ORTHO05D008337 2.3e-10 70.5 189 33.3
MD08G1012900 Malus domestica HOM05D015458 ORTHO05D008337 3.0e-10 70.1 141 34.0
QL02p011665 Quercus lobata HOM05D007760 ORTHO05D008337 4.0e-10 69.7 77 55.8
Potri.002G021900 Populus trichocarpa HOM05D007760 ORTHO05D008337 6.7e-10 68.9 83 49.4
Thecc.08G044900 Theobroma cacao HOM05D007760 ORTHO05D008337 8.8e-10 68.6 321 29.6
Psat6g002840 Pisum sativum HOM05D007760 ORTHO05D008337 2.0e-09 67.4 78 53.8
Gorai.010G003900 Gossypium raimondii HOM05D007760 ORTHO05D008337 2.6e-09 67.0 271 29.9
Psat6g002720 Pisum sativum HOM05D007760 ORTHO05D008337 4.4e-09 66.2 84 48.8
arahy.Tifrunner.gnm1.ann1.EU98QJ Arachis hypogaea HOM05D007760 ORTHO05D008337 7.5e-09 65.5 84 51.2
arahy.Tifrunner.gnm1.ann1.WD1IN2 Arachis hypogaea HOM05D007760 ORTHO05D008337 7.5e-09 65.5 84 51.2
Gohir.A06G003700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 7.5e-09 65.5 272 29.8
Psat6g002640 Pisum sativum HOM05D007760 ORTHO05D008337 1.3e-08 64.7 75 50.7
RcHm_v2.0_Chr6g0302891 Rosa chinensis HOM05D015458 ORTHO05D008337 1.3e-08 64.7 107 44.9
vmacro22892 Vaccinium macrocarpon HOM05D007760 ORTHO05D008337 2.2e-08 63.9 187 35.3
Haze_22637 Corylus avellana HOM05D007760 ORTHO05D008337 2.8e-08 63.5 180 36.1
Gohir.D06G006600 Gossypium hirsutum HOM05D007760 ORTHO05D008337 2.8e-08 63.5 272 29.0
ClCG08G014270 Citrullus lanatus HOM05D016278 ORTHO05D008337 3.7e-08 63.2 124 39.5
TWI36G1437 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 8.2e-08 62.0 183 33.3
Medtr1g025310 Medicago truncatula HOM05D007760 ORTHO05D008337 1.4e-07 61.2 71 52.1
FvH4_2g38410 Fragaria vesca HOM05D015458 ORTHO05D008337 1.8e-07 60.8 90 44.4
Ca_13430_v3 Cicer arietinum L. HOM05D007760 ORTHO05D008337 2.4e-07 60.5 204 32.8
Gohir.A06G003900 Gossypium hirsutum HOM05D007760 ORTHO05D008337 2.4e-07 60.5 273 27.5
MD15G1011900 Malus domestica HOM05D015458 ORTHO05D008337 2.4e-07 60.5 80 42.5
FAN20G0648 Fragaria x ananassa HOM05D015458 ORTHO05D008337 3.1e-07 60.1 90 43.3
Cfa013954 Carpinus fangiana HOM05D007760 ORTHO05D008337 4.1e-07 59.7 181 35.9
CiPaw.07G149400 Carya illinoinensis HOM05D007760 ORTHO05D008337 5.3e-07 59.3 180 35.0
Sc15g0004960 Simmondsia chinensis HOM05D007760 ORTHO05D008337 7.0e-07 58.9 267 30.3
CiPaw.08G066600 Carya illinoinensis HOM05D007760 ORTHO05D008337 1.2e-06 58.2 271 30.6
Lalb_Chr14g0369911 Lupinus albus HOM05D007760 ORTHO05D008337 1.2e-06 58.2 89 47.2
FAN27G2463 Fragaria x ananassa HOM05D015458 ORTHO05D008337 2.0e-06 57.4 90 42.2
Cc10_g01650 Coffea canephora HOM05D007760 ORTHO05D008337 3.5e-06 56.6 196 33.7
FAN15G2338 Fragaria x ananassa HOM05D015458 ORTHO05D008337 3.5e-06 56.6 90 41.1
Hund05187 Selenicereus undatus HOM05D030748 ORTHO05D008337 3.5e-06 56.6 108 42.6
GSVIVG01009912001 Vitis vinifera HOM05D007760 ORTHO05D008337 4.5e-06 56.2 148 33.8


User provided reference genes

Program Settings