Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow8G4168 Salvia bowleyana HOM05D005538 ORTHO05D007055 8.5e-119 430.3 204 100.0
SalBow2G1516 Salvia bowleyana HOM05D005538 ORTHO05D007055 2.9e-34 149.4 79 84.8
Oeu003281.1 Olea europaea HOM05D005538 ORTHO05D007055 1.2e-27 127.5 80 70.0
SGA_v2.0_scaffold80G25945 Striga asiatica HOM05D005538 ORTHO05D007055 9.4e-25 117.9 76 72.4
Actinidia30605 Actinidia chinensis HOM05D005538 ORTHO05D007055 2.7e-24 116.3 76 69.7
Migut.K01033 Erythranthe guttata HOM05D005538 ORTHO05D007055 2.3e-23 113.2 84 64.3
SalBow8G3396 Salvia bowleyana HOM05D018271 ORTHO05D007055 6.7e-23 111.7 54 92.6
PGSC0003DMG400030010 Solanum tuberosum HOM05D005538 ORTHO05D007055 6.7e-23 111.7 81 66.7
Dinv06880 Davidia involucrata HOM05D005538 ORTHO05D007055 1.1e-22 110.9 75 68.0
Solyc01g009780.3 Solanum lycopersicum HOM05D005538 ORTHO05D007055 1.1e-22 110.9 81 67.9
Sopen01g005330 Solanum pennellii HOM05D005538 ORTHO05D007055 1.1e-22 110.9 81 67.9
Hma1.2p1_0459F.1_g157240 Hydrangea macrophylla HOM05D005538 ORTHO05D007055 3.3e-22 109.4 85 61.2
unitig_8.g3121 Utricularia gibba HOM05D005538 ORTHO05D007055 7.4e-22 108.2 92 59.8
HanXRQChr06g0175181 Helianthus annuus HOM05D005538 ORTHO05D007055 9.7e-22 107.8 74 60.8
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 1.7e-21 107.1 81 64.2
Peaxi162Scf00220g00119 Petunia axillaris HOM05D005538 ORTHO05D007055 2.2e-21 106.7 78 65.4
TAR371G0765 Trochodendron aralioides HOM05D005538 ORTHO05D007055 2.8e-21 106.3 80 62.5
vmacro22631 Vaccinium macrocarpon HOM05D005538 ORTHO05D007055 4.8e-21 105.5 78 61.5
Actinidia22132 Actinidia chinensis HOM05D005538 ORTHO05D007055 6.3e-21 105.1 77 62.3
TAR622G0886 Trochodendron aralioides HOM05D005538 ORTHO05D007055 8.2e-21 104.8 78 60.3
MSTRG.469 Avicennia marina HOM05D005538 ORTHO05D007055 2.4e-20 103.2 104 49.0
CSS0040217 Camellia sinensis var. sinensis HOM05D005538 ORTHO05D007055 2.4e-20 103.2 76 63.2
PSO017G1114 Papaver somniferum HOM05D005538 ORTHO05D007055 7.0e-20 101.7 83 57.8
PSO478G3672 Papaver somniferum HOM05D005538 ORTHO05D007055 7.0e-20 101.7 83 57.8
Sc04g0010460 Simmondsia chinensis HOM05D005538 ORTHO05D007055 1.2e-19 100.9 75 60.0
TAR629G0377 Trochodendron aralioides HOM05D005538 ORTHO05D007055 3.5e-19 99.4 81 54.3
CANSAT56G2313 Cannabis sativa HOM05D005538 ORTHO05D007055 2.9e-18 96.3 74 58.1
MBI07_g37483_MAGBIO Magnolia biondii HOM05D005538 ORTHO05D007055 2.9e-18 96.3 87 57.5
Ah.03g135760 Amaranthus hybridus HOM05D005538 ORTHO05D007055 5.0e-18 95.5 82 56.1
CAN.G1277.4 Capsicum annuum HOM05D005538 ORTHO05D007055 5.0e-18 95.5 88 54.5
Potri.001G061900 Populus trichocarpa HOM05D005538 ORTHO05D007055 5.0e-18 95.5 72 61.1
Duzib052G1117 Durio zibethinus HOM05D005538 ORTHO05D007055 8.5e-18 94.7 74 55.4
TAR628G0286 Trochodendron aralioides HOM05D000367 ORTHO05D001438 8.5e-18 94.7 78 55.1
Gohir.A12G140500 Gossypium hirsutum HOM05D005538 ORTHO05D007055 1.1e-17 94.4 74 55.4
Gorai.008G156500 Gossypium raimondii HOM05D005538 ORTHO05D007055 1.1e-17 94.4 74 55.4
Hund25495 Selenicereus undatus HOM05D005538 ORTHO05D007055 1.1e-17 94.4 87 51.7
Gohir.D12G145100 Gossypium hirsutum HOM05D005538 ORTHO05D007055 1.9e-17 93.6 74 55.4
Manes.08G103200 Manihot esculenta HOM05D005538 ORTHO05D007055 3.2e-17 92.8 72 58.3
Prupe.1G219100 Prunus persica HOM05D005538 ORTHO05D007055 3.2e-17 92.8 74 55.4
MD13G1126300 Malus domestica HOM05D005538 ORTHO05D007055 4.2e-17 92.4 74 55.4
ATR0582G064 Amborella trichopoda HOM05D005538 ORTHO05D007055 7.2e-17 91.7 77 55.8
Cfa009412 Carpinus fangiana HOM05D005538 ORTHO05D007055 7.2e-17 91.7 74 52.7
Potri.003G165900 Populus trichocarpa HOM05D005538 ORTHO05D007055 7.2e-17 91.7 72 56.9
CiPaw.05G104000 Carya illinoinensis HOM05D005538 ORTHO05D007055 9.4e-17 91.3 75 54.7
Haze_12470 Corylus avellana HOM05D005538 ORTHO05D007055 9.4e-17 91.3 74 52.7
HanXRQChr17g0540491 Helianthus annuus HOM05D005538 ORTHO05D007055 9.4e-17 91.3 74 55.4
TAR629G2749 Trochodendron aralioides HOM05D005538 ORTHO05D007055 9.4e-17 91.3 78 53.8
EL10Ac6g13582 Beta vulgaris HOM05D005538 ORTHO05D007055 1.6e-16 90.5 87 52.9
Manes.09G185800 Manihot esculenta HOM05D005538 ORTHO05D007055 1.6e-16 90.5 72 55.6
Sabra03G0121100 Salix brachista HOM05D005538 ORTHO05D007055 1.6e-16 90.5 74 54.1
AUR62028865 Chenopodium quinoa HOM05D005538 ORTHO05D007055 2.1e-16 90.1 94 48.9
Ciclev10033047m.g Citrus clementina HOM05D005538 ORTHO05D007055 2.1e-16 90.1 75 57.3
GSVIVG01000954001 Vitis vinifera HOM05D005538 ORTHO05D007055 2.1e-16 90.1 68 60.3
CDE05G2048 Ceratophyllum demersum HOM05D005538 ORTHO05D007055 4.7e-16 89.0 80 51.2
Duzib248G0674 Durio zibethinus HOM05D005538 ORTHO05D007055 6.1e-16 88.6 74 52.7
ECA246G0794 Erigeron canadensis HOM05D005538 ORTHO05D007055 6.1e-16 88.6 87 48.3
Thecc.02G196400 Theobroma cacao HOM05D005538 ORTHO05D007055 6.1e-16 88.6 74 50.0
TWI18G0823 Tripterygium wilfordii HOM05D005538 ORTHO05D007055 6.1e-16 88.6 74 51.4
Nn3g16327 Nelumbo nucifera HOM05D005538 ORTHO05D007055 8.0e-16 88.2 75 54.7
Eucgr.B03544 Eucalyptus grandis HOM05D005538 ORTHO05D007055 1.0e-15 87.8 74 55.4
MD16G1126800 Malus domestica HOM05D005538 ORTHO05D007055 1.4e-15 87.4 74 50.0
Cc11_g17450 Coffea canephora HOM05D005538 ORTHO05D007055 1.8e-15 87.0 55 65.5
FvH4_4g23080 Fragaria vesca HOM05D005538 ORTHO05D007055 3.0e-15 86.3 71 53.5
Lj3A1076T34 Lonicera japonica HOM05D005538 ORTHO05D007055 3.0e-15 86.3 54 66.7
Ah.02g131140 Amaranthus hybridus HOM05D005538 ORTHO05D007055 4.0e-15 85.9 83 51.8
A10p25020 Brassica napus HOM05D005538 ORTHO05D007055 4.0e-15 85.9 74 52.7
C09p63880 Brassica napus HOM05D005538 ORTHO05D007055 4.0e-15 85.9 74 52.7
BolC9t59228H Brassica oleracea HOM05D005538 ORTHO05D007055 4.0e-15 85.9 74 52.7
CDE05G1586 Ceratophyllum demersum HOM05D005538 ORTHO05D007055 5.2e-15 85.5 80 48.8
Glyma.08G360100 Glycine max HOM05D005538 ORTHO05D007055 5.2e-15 85.5 57 61.4
Hma1.2p1_0365F.1_g136780 Hydrangea macrophylla HOM05D005538 ORTHO05D007055 5.2e-15 85.5 73 58.9
FAN12G2387 Fragaria x ananassa HOM05D005538 ORTHO05D007055 6.7e-15 85.1 60 63.3
FAN17G2587 Fragaria x ananassa HOM05D005538 ORTHO05D007055 6.7e-15 85.1 60 63.3
BraA10t44563Z Brassica rapa HOM05D005538 ORTHO05D007055 8.8e-15 84.7 73 53.4
CsaV3_6G007860 Cucumis sativus L. HOM05D005538 ORTHO05D007055 8.8e-15 84.7 74 51.4
Gohir.A03G151200 Gossypium hirsutum HOM05D005538 ORTHO05D007055 8.8e-15 84.7 74 52.7
Gohir.D02G174200 Gossypium hirsutum HOM05D005538 ORTHO05D007055 8.8e-15 84.7 74 52.7
Gorai.005G195900 Gossypium raimondii HOM05D005538 ORTHO05D007055 8.8e-15 84.7 74 52.7
FAN07G2678 Fragaria x ananassa HOM05D005538 ORTHO05D007055 1.2e-14 84.3 71 52.1
QL03p050357 Quercus lobata HOM05D005538 ORTHO05D007055 1.2e-14 84.3 53 66.0
TAR623G1654 Trochodendron aralioides HOM05D005538 ORTHO05D007055 1.5e-14 84.0 78 51.3
VMungo1383G2546 Vigna mungo HOM05D005538 ORTHO05D007055 1.5e-14 84.0 49 67.3
C02p05970 Brassica napus HOM05D005538 ORTHO05D007055 2.0e-14 83.6 74 51.4
BolC2t06540H Brassica oleracea HOM05D005538 ORTHO05D007055 2.0e-14 83.6 74 51.4
MELO3C022346.2 Cucumis melo HOM05D005538 ORTHO05D007055 2.0e-14 83.6 74 50.0
Aqoxy3G01758 Aquilegia oxysepala HOM05D005538 ORTHO05D007055 2.6e-14 83.2 84 50.0
CiPaw.06G107500 Carya illinoinensis HOM05D005538 ORTHO05D007055 2.6e-14 83.2 74 48.6
Sed0021477 Sechium edule HOM05D005538 ORTHO05D007055 2.6e-14 83.2 75 53.3
Aa31LG3G14470 Aethionema arabicum HOM05D005538 ORTHO05D007055 3.3e-14 82.8 74 51.4
Lsat_1_v5_gn_6_34980 Lactuca sativa HOM05D005538 ORTHO05D007055 3.3e-14 82.8 96 42.7
Phvul.008G000500 Phaseolus vulgaris HOM05D005538 ORTHO05D007055 3.3e-14 82.8 49 67.3
Sp6g30790 Schrenkiella parvula HOM05D005538 ORTHO05D007055 3.3e-14 82.8 74 51.4
Ca_06515_v3 Cicer arietinum L. HOM05D005538 ORTHO05D007055 4.4e-14 82.4 46 71.7
RcHm_v2.0_Chr4g0429351 Rosa chinensis HOM05D005538 ORTHO05D007055 4.4e-14 82.4 71 50.7
A02p01730 Brassica napus HOM05D005538 ORTHO05D007055 5.7e-14 82.0 74 50.0
BraA02t05152Z Brassica rapa HOM05D005538 ORTHO05D007055 5.7e-14 82.0 74 50.0
Glyma.18G301900 Glycine max HOM05D005538 ORTHO05D007055 5.7e-14 82.0 61 55.7
THA.LOC104825475 Tarenaya hassleriana HOM05D005538 ORTHO05D007055 7.5e-14 81.6 53 66.0
COL.COLO4_34942 Corchorus olitorius HOM05D005538 ORTHO05D007055 9.7e-14 81.3 71 49.3
Thhalv10014995m.g Eutrema salsugineum HOM05D005538 ORTHO05D007055 9.7e-14 81.3 74 50.0
Medtr7g005440 Medicago truncatula HOM05D005538 ORTHO05D007055 1.3e-13 80.9 46 67.4
Psat3g208320 Pisum sativum HOM05D005538 ORTHO05D007055 1.7e-13 80.5 46 67.4
AT5G13190 Arabidopsis thaliana HOM05D005538 ORTHO05D007055 2.2e-13 80.1 49 67.3
BcaNung01169 Brassica carinata HOM05D005538 ORTHO05D007055 2.2e-13 80.1 48 66.7
Carub.0006s1136 Capsella rubella HOM05D005538 ORTHO05D007055 2.2e-13 80.1 49 67.3
AL6G23800 Arabidopsis lyrata HOM05D005538 ORTHO05D007055 2.8e-13 79.7 49 67.3
TPR.G15629 Trifolium pratense HOM05D005538 ORTHO05D007055 3.7e-13 79.3 41 78.0
ClCG06G001820 Citrullus lanatus HOM05D005538 ORTHO05D007055 6.3e-13 78.6 74 51.4
TAR623G0421 Trochodendron aralioides HOM05D004785 ORTHO05D005704 6.3e-13 78.6 56 55.4
Os02g0515600 Oryza sativa ssp. japonica HOM05D005538 ORTHO05D007055 8.2e-13 78.2 73 46.6
Gohir.A01G021300 Gossypium hirsutum HOM05D005538 ORTHO05D007055 1.1e-12 77.8 76 50.0
Gohir.D01G019700 Gossypium hirsutum HOM05D005538 ORTHO05D007055 1.4e-12 77.4 74 50.0
Gorai.002G022100 Gossypium raimondii HOM05D005538 ORTHO05D007055 1.4e-12 77.4 74 50.0
SEGI_11247 Sequoiadendron giganteum HOM05D005538 ORTHO05D007055 2.4e-12 76.6 57 54.4
SEGI_29074 Sequoiadendron giganteum HOM05D005538 ORTHO05D012435 2.4e-12 76.6 56 57.1
SEGI_30741 Sequoiadendron giganteum HOM05D005538 ORTHO05D012435 2.4e-12 76.6 56 57.1
Hund28220 Selenicereus undatus HOM05D005538 ORTHO05D007055 9.1e-12 74.7 48 62.5
Hund28225 Selenicereus undatus HOM05D005538 ORTHO05D007055 9.1e-12 74.7 48 62.5
SEGI_18844 Sequoiadendron giganteum HOM05D005538 ORTHO05D007055 1.6e-11 73.9 57 54.4
SEGI_18352 Sequoiadendron giganteum HOM05D005538 ORTHO05D012435 4.5e-11 72.4 57 52.6
DCAR_028448 Daucus carota HOM05D005538 ORTHO05D007055 3.8e-10 69.3 41 65.9
Atru.chr11.2402 Acer truncatum HOM05D005538 ORTHO05D007055 6.5e-10 68.6 63 50.8
CARHR200280 Cardamine hirsuta HOM05D005538 ORTHO05D007055 8.5e-10 68.2 41 65.9
Rhsim12G0021000 Rhododendron simsii HOM05D005538 ORTHO05D007055 8.5e-10 68.2 84 42.9
Lj1g0020005 Lotus japonicus HOM05D005538 ORTHO05D007055 7.2e-09 65.1 43 62.8
Zm00001eb241880 Zea mays HOM05D005538 ORTHO05D007055 7.2e-09 65.1 79 44.3
Pp3c26_1170 Physcomitrium patens HOM05D005538 ORTHO05D007055 9.4e-09 64.7 75 45.3
SMO271G0002 Selaginella moellendorffii HOM05D005538 ORTHO05D007055 2.1e-08 63.5 56 44.6
TWI75G1796 Tripterygium wilfordii HOM05D005538 ORTHO05D007055 6.1e-08 62.0 44 56.8
Hma1.2p1_1396F.1_g280590 Hydrangea macrophylla HOM05D005538 ORTHO05D228224 1.2e-06 57.8 62 51.6
CBR_g4442 Chara braunii HOM05D005538 ORTHO05D007055 1.5e-06 57.4 50 46.0
BcaB01g05369 Brassica carinata HOM05D005538 ORTHO05D007055 2.0e-06 57.0 41 56.1
AagrBONN_evm.TU.Sc2ySwM_117.1139 Anthoceros agrestis HOM05D005538 ORTHO05D007055 4.4e-06 55.8 60 43.3
AagrBONN_evm.TU.Sc2ySwM_117.1282 Anthoceros agrestis HOM05D005538 ORTHO05D007055 4.4e-06 55.8 50 44.0


User provided reference genes

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