Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow8G4146 Salvia bowleyana HOM05D007627 ORTHO05D009640 1.0e-39 166.4 92 100.0
Migut.B01085 Erythranthe guttata HOM05D007627 ORTHO05D009640 2.7e-24 115.2 90 74.4
Oeu038438.1 Olea europaea HOM05D007627 ORTHO05D009640 6.8e-23 110.5 92 64.1
MSTRG.21216 Avicennia marina HOM05D007627 ORTHO05D009640 5.7e-22 107.5 88 71.6
Actinidia21001 Actinidia chinensis HOM05D007627 ORTHO05D009640 5.4e-20 100.9 92 58.7
unitig_578.g15942 Utricularia gibba HOM05D007627 ORTHO05D009640 9.1e-20 100.1 81 67.9
Dinv33113 Davidia involucrata HOM05D000361 ORTHO05D005006 3.5e-19 98.2 90 57.8
Sopen01g041030 Solanum pennellii HOM05D007627 ORTHO05D009640 3.5e-19 98.2 88 59.1
RcHm_v2.0_Chr7g0241611 Rosa chinensis HOM05D007627 ORTHO05D009640 5.9e-19 97.4 90 57.8
Solyc01g097360.4 Solanum lycopersicum HOM05D007627 ORTHO05D009640 2.9e-18 95.1 88 58.0
CAN.G134.101 Capsicum annuum HOM05D007627 ORTHO05D009640 3.8e-18 94.7 90 55.6
Nitab4.5_0012228g0040 Nicotiana tabacum HOM05D007627 ORTHO05D009640 1.1e-17 93.2 90 57.8
Nitab4.5_0001592g0100 Nicotiana tabacum HOM05D007627 ORTHO05D009640 1.5e-17 92.8 90 56.7
MD03G1295800 Malus domestica HOM05D007627 ORTHO05D009640 1.9e-17 92.4 90 56.7
Cc02_g30590 Coffea canephora HOM05D007627 ORTHO05D009640 2.5e-17 92.0 84 58.3
Peaxi162Scf00282g00336 Petunia axillaris HOM05D007627 ORTHO05D009640 4.2e-17 91.3 75 61.3
FAN25G0556 Fragaria x ananassa HOM05D007627 ORTHO05D009640 9.5e-17 90.1 89 59.6
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 2.1e-16 89.0 77 62.3
Dinv10091 Davidia involucrata HOM05D007627 ORTHO05D009640 3.6e-16 88.2 75 60.0
Hma1.2p1_0212F.1_g089970 Hydrangea macrophylla HOM05D007627 ORTHO05D009640 3.6e-16 88.2 76 63.2
Manes.05G003000 Manihot esculenta HOM05D007627 ORTHO05D009640 3.6e-16 88.2 91 58.2
Prupe.8G271600 Prunus persica HOM05D007627 ORTHO05D009640 3.6e-16 88.2 90 54.4
Atru.chr5.1007 Acer truncatum HOM05D007627 ORTHO05D009640 4.7e-16 87.8 91 58.2
Actinidia25845 Actinidia chinensis HOM05D007627 ORTHO05D009640 4.7e-16 87.8 92 51.1
CSS0016321 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 8.0e-16 87.0 94 57.4
CSS0031687 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 1.0e-15 86.7 94 58.5
PGR119G1365 Punica granatum HOM05D007627 ORTHO05D009640 1.0e-15 86.7 90 55.6
CsaV3_1G045260 Cucumis sativus L. HOM05D007627 ORTHO05D009640 3.0e-15 85.1 78 61.5
TAR381G1624 Trochodendron aralioides HOM05D007627 ORTHO05D009640 4.0e-15 84.7 90 56.7
FAN16G0578 Fragaria x ananassa HOM05D007627 ORTHO05D009640 5.2e-15 84.3 89 58.4
FAN21G2770 Fragaria x ananassa HOM05D007627 ORTHO05D009640 6.8e-15 84.0 89 56.2
Glyma.18G296500 Glycine max HOM05D007627 ORTHO05D009640 6.8e-15 84.0 90 55.6
CANSAT78G1399 Cannabis sativa HOM05D007627 ORTHO05D009640 1.2e-14 83.2 76 60.5
Ah.10g033580 Amaranthus hybridus HOM05D004014 ORTHO05D005890 2.0e-14 82.4 74 60.8
Phvul.008G006000 Phaseolus vulgaris HOM05D007627 ORTHO05D009640 2.6e-14 82.0 94 51.1
VMungo1383G2294 Vigna mungo HOM05D007627 ORTHO05D009640 3.4e-14 81.6 93 52.7
Haze_05035 Corylus avellana HOM05D007627 ORTHO05D009640 4.4e-14 81.3 77 59.7
Medtr7g007290 Medicago truncatula HOM05D007627 ORTHO05D009640 4.4e-14 81.3 91 51.6
DCAR_005763 Daucus carota HOM05D000361 ORTHO05D005006 5.7e-14 80.9 75 56.0
FvH4_3g25590 Fragaria vesca HOM05D007627 ORTHO05D009640 5.7e-14 80.9 78 59.0
FAN11G3818 Fragaria x ananassa HOM05D007627 ORTHO05D009640 5.7e-14 80.9 78 59.0
Rhsim01G0290400 Rhododendron simsii HOM05D007627 ORTHO05D009640 7.5e-14 80.5 92 51.1
ECA248G3246 Erigeron canadensis HOM05D007627 ORTHO05D009640 9.8e-14 80.1 91 52.7
AUR62037635 Chenopodium quinoa HOM05D007627 ORTHO05D009640 1.3e-13 79.7 74 56.8
Ciclev10023058m.g Citrus clementina HOM05D007627 ORTHO05D009640 2.2e-13 79.0 91 53.8
MELO3C010153.2 Cucumis melo HOM05D007627 ORTHO05D009640 2.2e-13 79.0 78 57.7
AUR62044233 Chenopodium quinoa HOM05D007627 ORTHO05D009640 2.8e-13 78.6 74 56.8
Sc17g0000480 Simmondsia chinensis HOM05D007627 ORTHO05D009640 3.7e-13 78.2 91 51.6
EL10Ac2g03554 Beta vulgaris HOM05D007627 ORTHO05D009640 6.3e-13 77.4 76 59.2
CiPaw.07G117000 Carya illinoinensis HOM05D007627 ORTHO05D009640 8.3e-13 77.0 77 55.8
Lalb_Chr04g0257421 Lupinus albus HOM05D007627 ORTHO05D009640 8.3e-13 77.0 77 55.8
Sed0009470 Sechium edule HOM05D007627 ORTHO05D009640 8.3e-13 77.0 78 55.1
Thecc.01G312700 Theobroma cacao HOM05D007627 ORTHO05D009640 8.3e-13 77.0 78 56.4
Os06g0717300 Oryza sativa ssp. japonica HOM05D007627 ORTHO05D009640 1.4e-12 76.3 92 48.9
QL02p088799 Quercus lobata HOM05D007627 ORTHO05D009640 1.8e-12 75.9 90 50.0
Eucgr.H01048 Eucalyptus grandis HOM05D007627 ORTHO05D009640 2.4e-12 75.5 78 56.4
Cfa005805 Carpinus fangiana HOM05D007627 ORTHO05D009640 4.1e-12 74.7 76 56.6
ClCG10G011370 Citrullus lanatus HOM05D007627 ORTHO05D009640 5.4e-12 74.3 91 50.5
Cpa.g.sc18.36 Carica papaya HOM05D007627 ORTHO05D009640 9.2e-12 73.6 85 52.9
Lalb_Chr10g0091241 Lupinus albus HOM05D007627 ORTHO05D009640 1.2e-11 73.2 77 58.4
QL12p020023 Quercus lobata HOM05D007627 ORTHO05D009640 1.2e-11 73.2 91 51.6
Potri.014G121300 Populus trichocarpa HOM05D007627 ORTHO05D009640 1.6e-11 72.8 91 51.6
Lj1g0016177 Lotus japonicus HOM05D007627 ORTHO05D009640 3.5e-11 71.6 91 49.5
HanXRQChr01g0000791 Helianthus annuus HOM05D007627 ORTHO05D009640 4.5e-11 71.2 89 49.4
Aqoxy1G00002 Aquilegia oxysepala HOM05D007627 ORTHO05D009640 5.9e-11 70.9 79 54.4
TPR.G35989 Trifolium pratense HOM05D007627 ORTHO05D009640 5.9e-11 70.9 91 48.4
Ca_04047_v3 Cicer arietinum L. HOM05D007627 ORTHO05D009640 7.8e-11 70.5 92 48.9
COL.COLO4_23238 Corchorus olitorius HOM05D007627 ORTHO05D009640 7.8e-11 70.5 76 55.3
Gohir.A11G109700 Gossypium hirsutum HOM05D007627 ORTHO05D009640 1.0e-10 70.1 62 62.9
Gohir.D11G114900 Gossypium hirsutum HOM05D007627 ORTHO05D009640 1.0e-10 70.1 62 62.9
Gorai.007G123100 Gossypium raimondii HOM05D007627 ORTHO05D009640 1.0e-10 70.1 62 62.9
Sabra14G0090000 Salix brachista HOM05D007627 ORTHO05D009640 1.3e-10 69.7 85 52.9
Cfa005807 Carpinus fangiana HOM05D007627 ORTHO05D009640 1.7e-10 69.3 77 51.9
HanXRQChr11g0329361 Helianthus annuus HOM05D007627 ORTHO05D009640 5.0e-10 67.8 74 54.1
Psat3g205400 Pisum sativum HOM05D007627 ORTHO05D009640 1.5e-09 66.2 89 46.1
Sp1g34810 Schrenkiella parvula HOM05D007627 ORTHO05D009640 4.3e-09 64.7 91 44.0
CDE04G1409 Ceratophyllum demersum HOM05D000443 ORTHO05D001066 5.6e-09 64.3 67 47.8
HPP92_022749 Vanilla planifolia HOM05D007627 ORTHO05D009640 5.6e-09 64.3 87 44.8
ATR0807G116 Amborella trichopoda HOM05D007627 ORTHO05D009640 7.3e-09 63.9 74 50.0
BcaC08g42976 Brassica carinata HOM05D007627 ORTHO05D009640 9.5e-09 63.5 77 49.4
Aa31LG2G19210 Aethionema arabicum HOM05D007627 ORTHO05D009640 2.1e-08 62.4 91 44.0
Duzib192G0243 Durio zibethinus HOM05D007627 ORTHO05D009640 2.1e-08 62.4 81 50.6
BcaB07g33814 Brassica carinata HOM05D007627 ORTHO05D009640 2.8e-08 62.0 77 49.4
Zm00001eb228130 Zea mays HOM05D007627 ORTHO05D009640 3.6e-08 61.6 79 46.8
Thhalv10011898m.g Eutrema salsugineum HOM05D007627 ORTHO05D009640 4.7e-08 61.2 92 41.3
Lsat_1_v5_gn_5_191420 Lactuca sativa HOM05D007627 ORTHO05D009640 6.1e-08 60.8 77 48.1
CARHR037420 Cardamine hirsuta HOM05D007627 ORTHO05D009640 2.3e-07 58.9 90 44.4
ATR0414G001 Amborella trichopoda HOM05D007627 ORTHO05D009640 3.4e-06 55.1 65 44.6


User provided reference genes

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