Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 3.9e-87 324.7 156 100.0
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 9.9e-67 256.9 196 68.4
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 3.8e-66 255.0 196 67.9
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 6.4e-66 254.2 173 71.1
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 2.1e-64 249.2 196 65.3
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 3.5e-64 248.4 196 66.8
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 1.0e-63 246.9 196 64.3
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 1.0e-63 246.9 196 64.3
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 1.0e-63 246.9 196 64.3
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 1.0e-63 246.9 196 64.3
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 2.3e-63 245.7 196 63.8
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 3.9e-63 245.0 196 63.8
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 3.9e-63 245.0 196 63.8
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 8.7e-63 243.8 196 63.8
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 8.7e-63 243.8 196 63.8
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 8.7e-63 243.8 196 62.8
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 8.7e-63 243.8 196 63.3
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 8.7e-63 243.8 196 64.3
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 1.1e-62 243.4 196 63.8
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.1e-62 243.4 196 64.3
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.1e-62 243.4 196 64.3
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 1.1e-62 243.4 196 62.8
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 1.5e-62 243.0 196 63.8
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 1.5e-62 243.0 196 63.3
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 1.5e-62 243.0 196 63.3
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 1.5e-62 243.0 196 63.3
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 1.5e-62 243.0 196 62.8
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 1.9e-62 242.7 196 63.8
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 1.9e-62 242.7 196 62.2
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 2.5e-62 242.3 196 63.3
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 2.5e-62 242.3 196 63.3
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 2.5e-62 242.3 196 63.3
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 2.5e-62 242.3 196 63.3
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 2.5e-62 242.3 196 63.3
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 2.5e-62 242.3 196 63.3
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 2.5e-62 242.3 196 62.2
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 2.5e-62 242.3 196 63.3
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 2.5e-62 242.3 196 62.8
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 2.5e-62 242.3 196 61.7
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 3.3e-62 241.9 196 62.8
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 3.3e-62 241.9 196 62.2
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 3.3e-62 241.9 196 62.8
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 4.3e-62 241.5 196 61.7
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 4.3e-62 241.5 196 62.8
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 5.6e-62 241.1 196 62.8
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 5.6e-62 241.1 196 63.3
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 5.6e-62 241.1 196 62.8
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 5.6e-62 241.1 196 62.8
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 5.6e-62 241.1 196 62.8
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 5.6e-62 241.1 196 63.3
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 5.6e-62 241.1 196 62.2
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 5.6e-62 241.1 196 62.8
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 5.6e-62 241.1 196 62.8
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 5.6e-62 241.1 196 61.7
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 7.3e-62 240.7 196 63.3
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 7.3e-62 240.7 196 61.7
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 7.3e-62 240.7 196 61.2
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 7.3e-62 240.7 196 61.2
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 7.3e-62 240.7 196 62.8
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 9.6e-62 240.4 196 63.3
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 9.6e-62 240.4 196 62.2
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 9.6e-62 240.4 196 61.2
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 1.3e-61 240.0 196 62.2
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 1.3e-61 240.0 196 62.2
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 1.3e-61 240.0 196 61.7
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 1.3e-61 240.0 196 61.2
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 1.3e-61 240.0 196 61.2
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 1.3e-61 240.0 196 62.2
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 1.6e-61 239.6 196 61.7
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 1.6e-61 239.6 196 61.7
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 1.6e-61 239.6 196 62.2
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 1.6e-61 239.6 196 62.8
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 1.6e-61 239.6 196 62.2
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 1.6e-61 239.6 196 62.2
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 2.1e-61 239.2 196 62.8
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 2.1e-61 239.2 196 62.2
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 2.1e-61 239.2 196 62.2
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 2.1e-61 239.2 196 61.7
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 2.8e-61 238.8 196 61.7
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 2.8e-61 238.8 196 60.7
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 2.8e-61 238.8 196 61.7
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 4.8e-61 238.0 196 61.7
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 4.8e-61 238.0 196 61.2
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 4.8e-61 238.0 196 62.2
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 4.8e-61 238.0 196 61.7
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 4.8e-61 238.0 196 61.7
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 4.8e-61 238.0 196 61.7
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 4.8e-61 238.0 196 61.7
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 4.8e-61 238.0 196 61.7
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 6.2e-61 237.7 196 61.7
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 8.1e-61 237.3 196 61.2
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 8.1e-61 237.3 196 61.2
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 1.1e-60 236.9 196 60.7
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 1.8e-60 236.1 196 61.7
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 1.8e-60 236.1 194 61.3
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 3.1e-60 235.3 196 60.7
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 5.3e-60 234.6 196 61.2
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 5.3e-60 234.6 196 60.2
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 5.3e-60 234.6 196 60.2
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 1.2e-59 233.4 196 60.7
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 1.5e-59 233.0 196 59.7
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 1.5e-59 233.0 196 59.7
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 7.6e-59 230.7 196 60.7
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 2.9e-58 228.8 195 59.5
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 3.8e-58 228.4 191 60.2
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 1.4e-57 226.5 195 59.0
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 2.1e-56 222.6 177 62.7
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 1.8e-55 219.5 195 57.4
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 6.7e-55 217.6 195 58.5
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 7.4e-54 214.2 194 57.2
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 2.8e-53 212.2 195 55.9
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 1.8e-52 209.5 195 55.9
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 1.9e-49 199.5 195 52.8
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 6.7e-47 191.0 195 49.7
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 3.4e-43 178.7 173 54.9
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 6.5e-42 174.5 152 58.6
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 1.1e-41 173.7 152 59.2
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 4.2e-41 171.8 124 68.5
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.2e-40 170.2 156 60.3
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 9.7e-14 80.9 65 63.1
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 4.5e-11 72.0 37 73.0
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 3.3e-06 55.8 27 88.9


User provided reference genes

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