Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow8G2605 Salvia bowleyana HOM05D006105 ORTHO05D006345 1.7e-185 652.5 325 100.0
MSTRG.14950 Avicennia marina HOM05D006105 ORTHO05D006345 1.5e-61 240.7 421 46.3
MSTRG.14216 Avicennia marina HOM05D006105 ORTHO05D006345 9.0e-46 188.3 419 40.8
SGA_v2.0_scaffold73G24208 Striga asiatica HOM05D006105 ORTHO05D006345 9.3e-43 178.3 403 38.5
SGA_v2.0_scaffold34G13768 Striga asiatica HOM05D006105 ORTHO05D006345 2.0e-37 160.6 391 37.6
SalBow7G2198 Salvia bowleyana HOM05D006105 ORTHO05D006345 2.6e-37 160.2 351 38.2
SalBow7G3373 Salvia bowleyana HOM05D006105 ORTHO05D006345 5.9e-37 159.1 351 37.9
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 2.5e-32 143.7 433 33.0
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 2.8e-31 140.2 387 35.4
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 1.2e-29 134.8 349 35.5
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 2.6e-29 133.7 372 35.5
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 4.5e-29 132.9 412 32.3
Migut.M00751 Erythranthe guttata HOM05D006105 ORTHO05D006345 7.7e-29 132.1 337 37.7
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 1.0e-28 131.7 408 33.3
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 3.8e-28 129.8 391 35.5
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 2.1e-26 124.0 389 33.9
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 2.7e-26 123.6 384 34.9
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 7.9e-26 122.1 413 33.4
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 2.3e-25 120.6 433 31.4
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 3.9e-25 119.8 395 32.7
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 5.1e-25 119.4 270 37.4
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 5.1e-25 119.4 430 31.2
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 7.4e-24 115.5 422 30.6
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 1.4e-22 111.3 392 32.7
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 1.4e-22 111.3 417 31.7
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 9.1e-22 108.6 304 34.2
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 9.1e-22 108.6 378 33.1
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 9.1e-22 108.6 340 33.5
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.2e-21 108.2 400 30.5
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 1.5e-21 107.8 428 30.6
ECA234G3938 Erigeron canadensis HOM05D006105 ORTHO05D006345 2.6e-21 107.1 407 28.3
Solyc07g062685.2 Solanum lycopersicum HOM05D006105 ORTHO05D006345 2.6e-21 107.1 388 33.5
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 4.5e-21 106.3 390 31.5
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 4.5e-21 106.3 462 30.5
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 7.7e-21 105.5 379 33.2
Rhsim06G0204700 Rhododendron simsii HOM05D006105 ORTHO05D006345 1.3e-20 104.8 409 30.6
Sopen07g030920 Solanum pennellii HOM05D006105 ORTHO05D006345 5.0e-20 102.8 368 32.1
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 8.5e-20 102.1 251 37.1
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 1.4e-19 101.3 313 34.5
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 3.2e-19 100.1 353 32.3
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 3.2e-19 100.1 319 33.9
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 4.2e-19 99.8 410 29.3
HanXRQChr10g0304731 Helianthus annuus HOM05D006105 ORTHO05D006345 9.4e-19 98.6 392 28.1
Phvul.005G068000 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 1.2e-18 98.2 419 29.8
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 1.2e-18 98.2 347 30.3
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.6e-18 97.8 276 33.0
Lsat_1_v5_gn_5_129201 Lactuca sativa HOM05D006105 ORTHO05D006345 2.1e-18 97.4 376 29.0
arahy.Tifrunner.gnm1.ann1.TTJ9YL Arachis hypogaea HOM05D006105 ORTHO05D006345 3.6e-18 96.7 345 32.2
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 4.7e-18 96.3 328 31.1
Atru.chr2.2260 Acer truncatum HOM05D006105 ORTHO05D006345 6.1e-18 95.9 321 30.5
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 6.1e-18 95.9 405 29.4
HanXRQChr12g0372831 Helianthus annuus HOM05D006105 ORTHO05D006345 7.9e-18 95.5 334 30.8
arahy.Tifrunner.gnm1.ann1.LEI4AX Arachis hypogaea HOM05D006105 ORTHO05D006345 1.4e-17 94.7 387 29.7
Oeu061338.1 Olea europaea HOM05D006105 ORTHO05D006345 1.8e-17 94.4 216 38.0
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 1.8e-17 94.4 315 32.7
VMungo1080G1877 Vigna mungo HOM05D006105 ORTHO05D006345 1.8e-17 94.4 405 29.4
DCAR_013141 Daucus carota HOM05D006105 ORTHO05D006345 5.2e-17 92.8 379 27.4
DCAR_021012 Daucus carota HOM05D006105 ORTHO05D006345 6.7e-17 92.4 367 30.8
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 2.0e-16 90.9 326 31.0
Lsat_1_v5_gn_7_103061 Lactuca sativa HOM05D006105 ORTHO05D006345 2.0e-16 90.9 354 32.2
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 2.6e-16 90.5 437 27.9
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 3.3e-16 90.1 418 30.1
arahy.Tifrunner.gnm1.ann1.KE6FEG Arachis hypogaea HOM05D006105 ORTHO05D006345 5.7e-16 89.4 373 29.0
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 9.7e-16 88.6 271 35.8
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 9.7e-16 88.6 328 30.5
Lalb_Chr25g0286021 Lupinus albus HOM05D006105 ORTHO05D006345 9.7e-16 88.6 403 28.3
Cc05_g11450 Coffea canephora HOM05D006105 ORTHO05D006345 1.3e-15 88.2 246 36.2
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 1.7e-15 87.8 376 31.4
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 2.2e-15 87.4 449 27.6
Ca_04016_v3 Cicer arietinum L. HOM05D006105 ORTHO05D006345 2.8e-15 87.0 429 29.6
FAN21G1974 Fragaria x ananassa HOM05D006105 ORTHO05D006345 8.2e-15 85.5 449 29.8
RcHm_v2.0_Chr5g0031561 Rosa chinensis HOM05D006105 ORTHO05D006345 8.2e-15 85.5 453 29.1
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 1.1e-14 85.1 394 29.2
Eucgr.F01202 Eucalyptus grandis HOM05D006105 ORTHO05D006345 1.4e-14 84.7 268 34.3
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 1.8e-14 84.3 443 28.4
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 1.8e-14 84.3 455 29.2
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 2.4e-14 84.0 415 29.6
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 3.1e-14 83.6 345 30.4
TPR.G9213 Trifolium pratense HOM05D006105 ORTHO05D006345 3.1e-14 83.6 419 27.9
FAN16G1829 Fragaria x ananassa HOM05D006105 ORTHO05D006345 4.1e-14 83.2 454 28.9
CiPaw.12G115300 Carya illinoinensis HOM05D006105 ORTHO05D006345 5.3e-14 82.8 243 33.7
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 5.3e-14 82.8 306 33.3
FvH4_3g18750 Fragaria vesca HOM05D006105 ORTHO05D006345 7.0e-14 82.4 452 29.2
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 9.1e-14 82.0 305 31.1
Glyma.13G271900 Glycine max HOM05D006105 ORTHO05D006345 1.2e-13 81.6 372 29.0
CSS0004572 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 3.5e-13 80.1 231 33.8
CsaV3_4G033280 Cucumis sativus L. HOM05D006105 ORTHO05D006345 3.5e-13 80.1 323 31.9
Migut.H01972 Erythranthe guttata HOM05D006105 ORTHO05D006345 3.5e-13 80.1 171 40.4
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 5.9e-13 79.3 345 29.9
PGSC0003DMG400021273 Solanum tuberosum HOM05D006105 ORTHO05D006345 5.9e-13 79.3 294 31.0
MELO3C025628.2 Cucumis melo HOM05D006105 ORTHO05D006345 7.7e-13 79.0 336 31.0
Glyma.06G232600 Glycine max HOM05D006105 ORTHO05D006345 7.7e-13 79.0 294 32.0
Glyma.12G228100 Glycine max HOM05D006105 ORTHO05D006345 1.0e-12 78.6 313 30.7
Lj3g0024128 Lotus japonicus HOM05D006105 ORTHO05D006345 1.0e-12 78.6 402 28.4
FAN11G0448 Fragaria x ananassa HOM05D006105 ORTHO05D006345 1.7e-12 77.8 455 28.4
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 2.9e-12 77.0 339 28.6
Peaxi162Scf00069g01930 Petunia axillaris HOM05D006105 ORTHO05D006345 4.2e-11 73.2 420 28.6
Nitab4.5_0003077g0030 Nicotiana tabacum HOM05D006105 ORTHO05D006345 5.5e-11 72.8 397 27.2
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 1.6e-10 71.2 326 30.7
Gohir.A01G059000 Gossypium hirsutum HOM05D006105 ORTHO05D006345 2.1e-10 70.9 237 32.9
Medtr2g078220 Medicago truncatula HOM05D006105 ORTHO05D006345 2.7e-10 70.5 428 26.6
MD11G1258600 Malus domestica HOM05D006105 ORTHO05D006345 6.1e-10 69.3 308 30.5
Gohir.D01G045100 Gossypium hirsutum HOM05D006105 ORTHO05D006345 8.0e-10 68.9 305 29.5
Sed0026435 Sechium edule HOM05D006105 ORTHO05D006345 8.0e-10 68.9 356 29.8
ClCG07G009910 Citrullus lanatus HOM05D006105 ORTHO05D006345 1.8e-09 67.8 397 27.7
Solyc12g014120.3 Solanum lycopersicum HOM05D006105 ORTHO05D006345 4.0e-09 66.6 152 37.5
Manes.17G052800 Manihot esculenta HOM05D013066 ORTHO05D010890 5.2e-09 66.2 400 28.0
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 6.7e-09 65.9 417 27.1
DCAR_024487 Daucus carota HOM05D006105 ORTHO05D006345 8.8e-09 65.5 315 25.1
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 1.5e-08 64.7 319 27.9
ECA236G3415 Erigeron canadensis HOM05D006105 ORTHO05D006345 3.3e-08 63.5 268 32.1
Sed0015488 Sechium edule HOM05D006105 ORTHO05D006345 4.4e-08 63.2 402 27.6
PGR083G1480 Punica granatum HOM05D006105 ORTHO05D006345 7.5e-08 62.4 291 29.9
Sabra16G0247400 Salix brachista HOM05D006105 ORTHO05D006345 7.5e-08 62.4 247 32.8
Oeu051102.1 Olea europaea HOM05D006105 ORTHO05D006345 6.3e-07 59.3 108 40.7
SEGI_31349 Sequoiadendron giganteum HOM05D016559 ORTHO05D006345 6.3e-07 59.3 223 29.1
MBI06_g46086_MAGBIO Magnolia biondii HOM05D026394 ORTHO05D030051 1.4e-06 58.2 83 50.6
MELO3C016090.2 Cucumis melo HOM05D006105 ORTHO05D006345 3.1e-06 57.0 344 28.2
MBI06_g40465_MAGBIO Magnolia biondii HOM05D026394 ORTHO05D030051 5.3e-06 56.2 332 26.2
Nn1g04330 Nelumbo nucifera HOM05D006105 ORTHO05D006345 9.1e-06 55.5 90 45.6


User provided reference genes

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