Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow8G2019 Salvia bowleyana HOM05D007438 ORTHO05D009395 2.5e-82 308.9 177 100.0
SalBow7G1752 Salvia bowleyana HOM05D007438 ORTHO05D009395 3.9e-59 231.9 139 91.4
MSTRG.6772 Avicennia marina HOM05D007438 ORTHO05D009395 5.4e-29 131.7 151 49.7
Peaxi162Scf00154g01024 Petunia axillaris HOM05D007438 ORTHO05D009395 1.9e-21 106.7 149 42.3
CAN.G803.12 Capsicum annuum HOM05D007438 ORTHO05D009395 3.5e-20 102.4 134 43.3
PGSC0003DMG401017288 Solanum tuberosum HOM05D007438 ORTHO05D009395 7.9e-20 101.3 148 41.9
Sopen07g029090 Solanum pennellii HOM05D007438 ORTHO05D009395 3.3e-18 95.9 143 42.7
GSVIVG01020783001 Vitis vinifera HOM05D007438 ORTHO05D009395 2.1e-17 93.2 146 41.1
Solyc07g055720.4 Solanum lycopersicum HOM05D007438 ORTHO05D009395 2.8e-17 92.8 143 42.7
Cc05_g09010 Coffea canephora HOM05D007438 ORTHO05D009395 3.7e-17 92.4 143 39.9
Migut.M00210 Erythranthe guttata HOM05D007438 ORTHO05D009395 4.8e-17 92.0 105 49.5
TAR629G3405 Trochodendron aralioides HOM05D007438 ORTHO05D009395 6.2e-17 91.7 138 42.8
Nitab4.5_0003133g0060 Nicotiana tabacum HOM05D007438 ORTHO05D009395 1.4e-16 90.5 130 43.1
Actinidia30518 Actinidia chinensis HOM05D007438 ORTHO05D009395 2.4e-16 89.7 109 47.7
COL.COLO4_33655 Corchorus olitorius HOM05D007438 ORTHO05D009395 1.5e-15 87.0 171 35.7
CSS0035465 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 1.0e-14 84.3 122 45.1
CSS0040852 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 1.0e-14 84.3 123 44.7
CSS0044063 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 1.3e-14 84.0 151 39.1
TAR626G1821 Trochodendron aralioides HOM05D007438 ORTHO05D009395 1.7e-14 83.6 142 39.4
Thecc.01G156400 Theobroma cacao HOM05D007438 ORTHO05D009395 6.5e-14 81.6 137 39.4
Potri.014G141500 Populus trichocarpa HOM05D007438 ORTHO05D009395 1.1e-13 80.9 140 41.4
Duzib264G0748 Durio zibethinus HOM05D007438 ORTHO05D009395 2.5e-13 79.7 137 38.0
Eucgr.A01949 Eucalyptus grandis HOM05D007438 ORTHO05D009395 3.2e-13 79.3 113 46.9
Glyma.02G288700 Glycine max HOM05D007438 ORTHO05D009395 3.2e-13 79.3 143 37.1
Lj3C1012T3 Lonicera japonica HOM05D007438 ORTHO05D009395 7.2e-13 78.2 139 36.0
LjContig00310g0012276 Lotus japonicus HOM05D007438 ORTHO05D009395 7.2e-13 78.2 135 40.0
arahy.Tifrunner.gnm1.ann1.2XI8FI Arachis hypogaea HOM05D007438 ORTHO05D009395 1.2e-12 77.4 102 47.1
arahy.Tifrunner.gnm1.ann1.9R49YU Arachis hypogaea HOM05D007438 ORTHO05D009395 1.2e-12 77.4 102 47.1
Manes.01G129800 Manihot esculenta HOM05D007438 ORTHO05D009395 1.2e-12 77.4 141 41.8
Sc21g0004320 Simmondsia chinensis HOM05D007438 ORTHO05D009395 1.2e-12 77.4 149 36.9
Glyma.14G026100 Glycine max HOM05D007438 ORTHO05D009395 1.6e-12 77.0 158 37.3
Sabra14G0106800 Salix brachista HOM05D007438 ORTHO05D009395 1.6e-12 77.0 152 38.2
ECA234G1517 Erigeron canadensis HOM05D007438 ORTHO05D009395 2.1e-12 76.6 146 35.6
Medtr5g091960 Medicago truncatula HOM05D007438 ORTHO05D009395 2.1e-12 76.6 139 39.6
Aqoxy1G01934 Aquilegia oxysepala HOM05D007438 ORTHO05D009395 6.1e-12 75.1 113 42.5
QL08p043052 Quercus lobata HOM05D007438 ORTHO05D009395 7.9e-12 74.7 60 66.7
Rhsim04G0081300 Rhododendron simsii HOM05D007438 ORTHO05D009395 7.9e-12 74.7 144 35.4
MBI06_g16570_MAGBIO Magnolia biondii HOM05D007438 ORTHO05D009395 3.9e-11 72.4 143 35.0
Nn3g21054 Nelumbo nucifera HOM05D007438 ORTHO05D009395 3.9e-11 72.4 155 36.1
TPR.G12671 Trifolium pratense HOM05D007438 ORTHO05D009395 5.1e-11 72.0 140 37.9
Cfa021395 Carpinus fangiana HOM05D007438 ORTHO05D009395 1.1e-10 70.9 60 66.7
CiPaw.03G193300 Carya illinoinensis HOM05D007438 ORTHO05D009395 1.1e-10 70.9 61 65.6
EL10Ac9g21031 Beta vulgaris HOM05D007438 ORTHO05D009395 1.5e-10 70.5 114 38.6
Lsat_1_v5_gn_4_26780 Lactuca sativa HOM05D007438 ORTHO05D009395 1.5e-10 70.5 145 33.1
CANSAT64G1631 Cannabis sativa HOM05D007438 ORTHO05D009395 1.9e-10 70.1 58 65.5
Ciclev10016256m.g Citrus clementina HOM05D007438 ORTHO05D009395 1.9e-10 70.1 114 38.6
TWI74G0447 Tripterygium wilfordii HOM05D007438 ORTHO05D009395 2.5e-10 69.7 137 37.2
vmacro09194 Vaccinium macrocarpon HOM05D007438 ORTHO05D009395 3.3e-10 69.3 139 34.5
VMungo1215G1664 Vigna mungo HOM05D007438 ORTHO05D009395 3.3e-10 69.3 126 35.7
Ca_06297_v3 Cicer arietinum L. HOM05D007438 ORTHO05D009395 4.3e-10 68.9 139 36.0
PGR042G1218 Punica granatum HOM05D007438 ORTHO05D009395 4.3e-10 68.9 111 36.0
AUR62031789 Chenopodium quinoa HOM05D007438 ORTHO05D009395 7.4e-10 68.2 136 32.4
Atru.chr6.3569 Acer truncatum HOM05D007438 ORTHO05D009395 1.3e-09 67.4 156 32.1
DCAR_013288 Daucus carota HOM05D007438 ORTHO05D009395 1.3e-09 67.4 134 35.8
MELO3C014451.2 Cucumis melo HOM05D007438 ORTHO05D009395 2.2e-09 66.6 136 36.0
Lalb_Chr10g0106871 Lupinus albus HOM05D007438 ORTHO05D009395 2.8e-09 66.2 142 33.8
Sed0004780 Sechium edule HOM05D007438 ORTHO05D009395 2.8e-09 66.2 129 35.7
HanXRQChr01g0028661 Helianthus annuus HOM05D007438 ORTHO05D009395 3.7e-09 65.9 118 36.4
HanXRQChr17g0565881 Helianthus annuus HOM05D007438 ORTHO05D009395 3.7e-09 65.9 144 33.3
Phvul.003G195300 Phaseolus vulgaris HOM05D007438 ORTHO05D009395 6.3e-09 65.1 106 37.7
CsaV3_6G037900 Cucumis sativus L. HOM05D007438 ORTHO05D009395 1.1e-08 64.3 131 35.9
AUR62023994 Chenopodium quinoa HOM05D007438 ORTHO05D009395 1.8e-08 63.5 134 32.8
ClCG09G022220 Citrullus lanatus HOM05D007438 ORTHO05D009395 1.8e-08 63.5 129 37.2
Dinv11426 Davidia involucrata HOM05D007438 ORTHO05D009395 2.4e-08 63.2 146 41.1
Psat2g015640 Pisum sativum HOM05D007438 ORTHO05D009395 2.4e-08 63.2 139 34.5
arahy.Tifrunner.gnm1.ann1.K6S8U8 Arachis hypogaea HOM05D007438 ORTHO05D009395 5.3e-08 62.0 59 57.6
Gorai.006G004700 Gossypium raimondii HOM05D007438 ORTHO05D009395 1.2e-07 60.8 137 30.7
Cpa.g.sc50.57 Carica papaya HOM05D007438 ORTHO05D009395 1.5e-07 60.5 185 31.4
Gohir.D09G003400 Gossypium hirsutum HOM05D007438 ORTHO05D009395 4.5e-07 58.9 137 29.9
Gohir.A09G003800 Gossypium hirsutum HOM05D007438 ORTHO05D009395 1.0e-06 57.8 137 29.9
SEGI_11984 Sequoiadendron giganteum HOM05D007438 ORTHO05D009395 3.8e-06 55.8 128 31.2


User provided reference genes

Program Settings