Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 4.2e-86 322.0 262 100.0
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 1.0e-52 211.1 250 79.6
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 1.6e-40 170.6 247 72.5
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.4e-36 157.5 240 70.8
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 4.4e-35 152.5 250 68.4
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 7.5e-35 151.8 247 68.4
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 2.2e-34 150.2 244 66.8
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 2.9e-34 149.8 240 70.8
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 2.9e-34 149.8 240 69.2
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 4.9e-34 149.1 248 67.3
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 4.1e-33 146.0 233 69.1
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 3.5e-32 142.9 242 66.9
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 4.6e-32 142.5 251 67.7
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 4.6e-32 142.5 239 69.9
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 7.8e-32 141.7 248 66.1
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 1.3e-31 141.0 244 69.3
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 1.7e-31 140.6 240 69.2
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 1.7e-31 140.6 240 67.5
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 2.3e-31 140.2 244 66.4
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 3.0e-31 139.8 238 68.9
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 3.9e-31 139.4 253 54.5
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 3.9e-31 139.4 240 68.8
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 5.1e-31 139.0 243 67.5
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 1.9e-30 137.1 252 65.9
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 2.5e-30 136.7 231 70.1
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 2.5e-30 136.7 241 66.0
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 4.3e-30 136.0 242 66.9
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 4.3e-30 136.0 243 67.1
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 4.3e-30 136.0 232 70.7
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 4.3e-30 136.0 250 65.2
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 7.3e-30 135.2 231 69.7
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 1.2e-29 134.4 247 66.0
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 1.2e-29 134.4 238 67.6
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 1.2e-29 134.4 238 67.2
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 1.6e-29 134.0 238 66.4
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 2.8e-29 133.3 233 70.4
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 3.6e-29 132.9 232 70.3
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 8.1e-29 131.7 248 62.5
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 1.1e-28 131.3 252 63.9
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 1.8e-28 130.6 82 76.8
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 5.2e-28 129.0 244 66.8
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 6.8e-28 128.6 240 65.8
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 1.2e-27 127.9 235 65.5
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 2.6e-27 126.7 254 64.6
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 9.9e-27 124.8 247 63.6
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 1.3e-26 124.4 79 77.2
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 1.3e-26 124.4 241 63.1
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 1.7e-26 124.0 262 63.0
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 2.2e-26 123.6 243 64.6
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 2.9e-26 123.2 79 75.9
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 3.7e-26 122.9 240 65.0
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 3.7e-26 122.9 253 64.0
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 4.9e-26 122.5 249 62.7
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 4.9e-26 122.5 251 62.5
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 4.9e-26 122.5 249 62.7
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 4.9e-26 122.5 251 62.5
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 4.9e-26 122.5 240 65.0
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 1.9e-25 120.6 237 63.7
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 2.4e-25 120.2 68 83.8
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 3.2e-25 119.8 240 64.2
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 4.1e-25 119.4 251 62.9
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 5.4e-25 119.0 250 63.2
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 7.1e-25 118.6 70 78.6
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 1.6e-24 117.5 178 75.8
Oeu042209.2 Olea europaea HOM05D006475 ORTHO05D007969 2.7e-24 116.7 376 47.3
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 3.5e-24 116.3 241 62.7
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 3.5e-24 116.3 295 57.3
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 6.0e-24 115.5 260 59.6
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 6.0e-24 115.5 237 65.4
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 1.0e-23 114.8 244 50.8
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 1.3e-23 114.4 248 60.9
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 1.3e-23 114.4 241 61.8
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 2.3e-23 113.6 232 65.5
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 3.0e-23 113.2 232 64.2
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 8.6e-23 111.7 253 59.3
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 8.6e-23 111.7 237 62.9
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 1.1e-22 111.3 239 61.9
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 1.9e-22 110.5 279 57.3
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 4.3e-22 109.4 261 59.8
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 9.6e-22 108.2 206 65.5
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 9.6e-22 108.2 181 55.2
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 1.2e-21 107.8 258 57.4
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 1.2e-21 107.8 258 57.4
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.2e-21 107.8 74 71.6
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 1.6e-21 107.5 261 58.6
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 2.1e-21 107.1 249 61.0
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 3.6e-21 106.3 243 60.9
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 4.7e-21 105.9 71 71.8
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 4.7e-21 105.9 81 67.9
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 2.4e-20 103.6 268 57.8
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 8.9e-20 101.7 65 69.2
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 1.2e-19 101.3 250 60.4
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 1.2e-19 101.3 236 61.4
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 5.8e-19 99.0 219 64.4
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 4.9e-18 95.9 73 68.5
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 6.4e-18 95.5 72 66.7
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 1.1e-17 94.7 79 57.0
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 5.4e-17 92.4 72 65.3
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 2.7e-16 90.1 68 64.7
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.7e-15 87.4 197 69.5
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 4.3e-14 82.8 258 52.3
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 4.3e-14 82.8 202 66.8
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.3e-13 81.3 203 34.5
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 2.8e-13 80.1 62 59.7
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 1.4e-12 77.8 237 56.1
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 2.0e-11 73.9 265 52.8
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 3.8e-10 69.7 67 47.8
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 8.4e-10 68.6 273 53.5
Nitab4.5_0001175g0040 Nicotiana tabacum HOM05D006475 ORTHO05D007969 8.4e-10 68.6 198 49.5
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 1.4e-09 67.8 197 62.9
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.9e-09 67.4 34 82.4
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 3.2e-09 66.6 196 42.9
CBR_g41202 Chara braunii HOM05D006475 ORTHO05D007969 3.2e-09 66.6 45 66.7
Dinv28011 Davidia involucrata HOM05D006475 ORTHO05D007969 2.7e-08 63.5 98 49.0
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 4.6e-08 62.8 267 50.2
Gohir.D08G138080 Gossypium hirsutum HOM05D006475 ORTHO05D007969 6.6e-07 58.9 36 75.0
Sc07g0008230 Simmondsia chinensis HOM05D006475 ORTHO05D007969 6.6e-07 58.9 197 59.9
Gorai.004G141500 Gossypium raimondii HOM05D006475 ORTHO05D007969 1.1e-06 58.2 36 75.0


User provided reference genes

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