Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow8G0306 Salvia bowleyana HOM05D005213 ORTHO05D006229 3.9e-127 458.4 275 100.0
Migut.A00332 Erythranthe guttata HOM05D005213 ORTHO05D006229 3.0e-42 176.4 385 41.0
TAR624G0676 Trochodendron aralioides HOM05D005213 ORTHO05D006229 6.7e-42 175.3 369 39.0
Peaxi162Scf00922g00016 Petunia axillaris HOM05D005213 ORTHO05D006229 6.9e-39 165.2 390 38.2
Cc08_g07800 Coffea canephora HOM05D005213 ORTHO05D006229 9.0e-39 164.9 413 34.6
Ciclev10008490m.g Citrus clementina HOM05D005213 ORTHO05D006229 3.4e-38 162.9 385 36.4
Cpa.g.sc82.19 Carica papaya HOM05D005213 ORTHO05D006229 4.5e-38 162.5 394 36.5
TWI34G0479 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 5.9e-38 162.2 393 35.6
CAN.G1059.3 Capsicum annuum HOM05D005213 ORTHO05D006229 1.6e-35 154.1 368 35.6
Duzib187G1454 Durio zibethinus HOM05D005213 ORTHO05D006229 4.6e-35 152.5 401 33.9
SGA_v2.0_scaffold22G09922 Striga asiatica HOM05D005213 ORTHO05D006229 1.0e-34 151.4 344 35.8
Duzib168G1397 Durio zibethinus HOM05D005213 ORTHO05D006229 1.8e-34 150.6 342 36.3
Prupe.1G401300 Prunus persica HOM05D005213 ORTHO05D006229 1.8e-34 150.6 397 33.0
Gorai.009G039700 Gossypium raimondii HOM05D005213 ORTHO05D006229 3.0e-34 149.8 406 32.3
Gohir.D05G039200 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.5e-33 147.5 408 32.8
Manes.16G087800 Manihot esculenta HOM05D005213 ORTHO05D006229 4.3e-33 146.0 401 35.2
Thecc.09G066400 Theobroma cacao HOM05D005213 ORTHO05D006229 4.3e-33 146.0 404 35.6
MBI19_g18107_MAGBIO Magnolia biondii HOM05D004195 ORTHO05D005309 5.7e-33 145.6 385 34.0
Gorai.010G094100 Gossypium raimondii HOM05D005213 ORTHO05D006229 9.7e-33 144.8 350 34.6
Duzib150G1003 Durio zibethinus HOM05D005213 ORTHO05D006229 2.8e-32 143.3 333 34.8
Gohir.D06G080700 Gossypium hirsutum HOM05D005213 ORTHO05D006229 3.7e-32 142.9 350 34.3
MD15G1047100 Malus domestica HOM05D005213 ORTHO05D006229 4.8e-32 142.5 413 33.2
Dinv41845 Davidia involucrata HOM05D005213 ORTHO05D006229 1.4e-31 141.0 441 31.7
Potri.006G217900 Populus trichocarpa HOM05D005213 ORTHO05D006229 2.4e-31 140.2 400 33.0
DCAR_001248 Daucus carota HOM05D005213 ORTHO05D006229 5.3e-31 139.0 380 34.5
MD08G1046900 Malus domestica HOM05D005213 ORTHO05D006229 9.0e-31 138.3 422 31.8
Haze_18367 Corylus avellana HOM05D005213 ORTHO05D006229 3.4e-30 136.3 327 39.8
Gohir.A06G081000 Gossypium hirsutum HOM05D005213 ORTHO05D006229 7.7e-30 135.2 349 33.2
CiPaw.16G068600 Carya illinoinensis HOM05D005213 ORTHO05D006229 1.0e-29 134.8 404 32.4
FAN15G1397 Fragaria x ananassa HOM05D005213 ORTHO05D006229 1.0e-29 134.8 403 34.0
Glyma.04G057900 Glycine max HOM05D005213 ORTHO05D006229 2.2e-29 133.7 400 31.5
ECA240G0440 Erigeron canadensis HOM05D005213 ORTHO05D006229 3.8e-29 132.9 360 33.9
RcHm_v2.0_Chr6g0304741 Rosa chinensis HOM05D005213 ORTHO05D006229 5.0e-29 132.5 400 33.0
Ca_15799_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 8.5e-29 131.7 396 29.8
Nn8g38551 Nelumbo nucifera HOM05D005213 ORTHO05D006229 1.1e-28 131.3 399 32.1
TWI32G0481 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 1.1e-28 131.3 387 36.4
Eucgr.C00749 Eucalyptus grandis HOM05D005213 ORTHO05D006229 1.4e-28 131.0 417 30.9
TPR.G21422 Trifolium pratense HOM05D005213 ORTHO05D006229 1.4e-28 131.0 320 33.4
Cfa023359 Carpinus fangiana HOM05D005213 ORTHO05D006229 1.9e-28 130.6 412 32.3
COL.COLO4_21169 Corchorus olitorius HOM05D005213 ORTHO05D006229 1.9e-28 130.6 417 29.5
FvH4_2g37040 Fragaria vesca HOM05D005213 ORTHO05D006229 1.9e-28 130.6 401 33.4
Nn6g35650 Nelumbo nucifera HOM05D005213 ORTHO05D006229 2.5e-28 130.2 390 33.8
HanXRQChr03g0067421 Helianthus annuus HOM05D005213 ORTHO05D006229 3.2e-28 129.8 334 36.5
Glyma.06G058600 Glycine max HOM05D005213 ORTHO05D006229 4.2e-28 129.4 316 39.2
FAN20G0215 Fragaria x ananassa HOM05D005213 ORTHO05D006229 5.5e-28 129.0 401 33.4
Oeu020105.1 Olea europaea HOM05D005213 ORTHO05D006229 2.1e-27 127.1 326 35.3
FAN27G3126 Fragaria x ananassa HOM05D005213 ORTHO05D006229 2.7e-27 126.7 401 32.9
Medtr3g105580 Medicago truncatula HOM05D005213 ORTHO05D006229 3.6e-27 126.3 318 33.6
Sc10g0009530 Simmondsia chinensis HOM05D005213 ORTHO05D006229 3.6e-27 126.3 312 32.7
Cfa017841 Carpinus fangiana HOM05D005213 ORTHO05D006229 6.1e-27 125.6 261 41.4
Hund02523 Selenicereus undatus HOM05D005213 ORTHO05D006229 7.9e-27 125.2 302 34.8
Haze_13552 Corylus avellana HOM05D005213 ORTHO05D006229 1.0e-26 124.8 406 32.3
Lj1g0011388 Lotus japonicus HOM05D005213 ORTHO05D006229 1.4e-26 124.4 382 31.4
GSVIVG01035506001 Vitis vinifera HOM05D005213 ORTHO05D006229 3.0e-26 123.2 289 36.7
Lalb_Chr11g0063421 Lupinus albus HOM05D005213 ORTHO05D006229 3.9e-26 122.9 328 32.9
Oeu022129.1 Olea europaea HOM05D005213 ORTHO05D006229 5.1e-26 122.5 281 34.9
Nitab4.5_0000508g0090 Nicotiana tabacum HOM05D005213 ORTHO05D006229 8.8e-26 121.7 355 34.1
Phvul.009G084600 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 1.1e-25 121.3 390 31.5
Psat5g033280 Pisum sativum HOM05D005213 ORTHO05D006229 1.1e-25 121.3 309 31.7
HanXRQChr08g0228011 Helianthus annuus HOM05D005213 ORTHO05D006229 1.5e-25 120.9 329 35.0
SGA_v2.0_scaffold4G02181 Striga asiatica HOM05D005213 ORTHO05D006229 2.0e-25 120.6 304 35.5
EL10Ac5g11257 Beta vulgaris HOM05D005213 ORTHO05D006229 2.5e-25 120.2 376 31.9
Nitab4.5_0007212g0010 Nicotiana tabacum HOM05D005213 ORTHO05D006229 2.5e-25 120.2 369 32.8
VMungo1309G2063 Vigna mungo HOM05D005213 ORTHO05D006229 3.7e-24 116.3 378 31.2
AUR62032196 Chenopodium quinoa HOM05D005213 ORTHO05D006229 8.2e-24 115.2 309 33.3
Manes.03G055700 Manihot esculenta HOM05D005213 ORTHO05D006229 2.4e-23 113.6 368 30.2
Aqoxy7G04081 Aquilegia oxysepala HOM05D005213 ORTHO05D006229 5.3e-23 112.5 397 31.0
ATR0681G043 Amborella trichopoda HOM05D005213 ORTHO05D006229 2.6e-22 110.2 416 30.5
TPR.G38861 Trifolium pratense HOM05D005213 ORTHO05D006229 4.5e-22 109.4 206 40.8
CsaV3_6G031800 Cucumis sativus L. HOM05D005213 ORTHO05D006229 1.7e-21 107.5 338 36.1
Migut.E01467 Erythranthe guttata HOM05D005213 ORTHO05D006229 2.9e-21 106.7 281 37.4
Rhsim04G0156600 Rhododendron simsii HOM05D005213 ORTHO05D006229 3.8e-21 106.3 407 28.7
Sed0001538 Sechium edule HOM05D005213 ORTHO05D006229 8.5e-21 105.1 258 40.7
THA.LOC104810950 Tarenaya hassleriana HOM05D005213 ORTHO05D006229 8.5e-21 105.1 343 31.5
PGR142G1942 Punica granatum HOM05D005213 ORTHO05D006229 1.1e-20 104.8 402 33.6
PSO386G0069 Papaver somniferum HOM05D005213 ORTHO05D006229 1.9e-20 104.0 436 28.2
AT5G21280 Arabidopsis thaliana HOM05D005213 ORTHO05D006229 2.5e-20 103.6 323 34.4
CARHR191550 Cardamine hirsuta HOM05D005213 ORTHO05D006229 4.2e-20 102.8 321 38.0
Carub.0006s1962 Capsella rubella HOM05D005213 ORTHO05D006229 7.2e-20 102.1 328 42.7
BNapus_Darmor_BZH_scaffold_38p00940 Brassica napus HOM05D005213 ORTHO05D006229 9.4e-20 101.7 316 37.0
BraA02t05631Z Brassica rapa HOM05D005213 ORTHO05D006229 9.4e-20 101.7 316 37.0
HanXRQChr10g0309951 Helianthus annuus HOM05D005213 ORTHO05D006229 9.4e-20 101.7 198 43.4
Lalb_Chr22g0349651 Lupinus albus HOM05D005213 ORTHO05D006229 9.4e-20 101.7 362 29.8
AL6G32940 Arabidopsis lyrata HOM05D005213 ORTHO05D006229 4.7e-19 99.4 314 41.1
BcaB08g36461 Brassica carinata HOM05D005213 ORTHO05D006229 4.7e-19 99.4 305 39.3
BcaC03g13850 Brassica carinata HOM05D005213 ORTHO05D006229 4.7e-19 99.4 269 36.1
BolC2t07127H Brassica oleracea HOM05D005213 ORTHO05D006229 4.7e-19 99.4 269 36.1
Sp6g23210 Schrenkiella parvula HOM05D005213 ORTHO05D006229 6.1e-19 99.0 273 41.0
MSTRG.11768 Avicennia marina HOM05D005213 ORTHO05D006229 7.9e-19 98.6 291 31.3
AUR62036963 Chenopodium quinoa HOM05D005213 ORTHO05D006229 7.9e-19 98.6 291 30.9
BcaB05g22758 Brassica carinata HOM05D005213 ORTHO05D006229 1.8e-18 97.4 261 34.5
Thhalv10014216m.g Eutrema salsugineum HOM05D005213 ORTHO05D006229 5.1e-18 95.9 322 34.8
CANSAT25G2504 Cannabis sativa HOM05D005213 ORTHO05D006229 1.1e-17 94.7 364 33.2
CSS0041342 Camellia sinensis var. sinensis HOM05D005213 ORTHO05D006229 2.6e-17 93.6 254 40.2
CDE11G0900 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 3.3e-17 93.2 195 38.5
unitig_0.g2816 Utricularia gibba HOM05D005213 ORTHO05D006229 5.7e-17 92.4 272 31.6
BraA03t10361Z Brassica rapa HOM05D005213 ORTHO05D006229 7.4e-17 92.0 287 34.1
Medtr1g014750 Medicago truncatula HOM05D005213 ORTHO05D006229 1.7e-16 90.9 205 39.0
unitig_747.g21889 Utricularia gibba HOM05D005213 ORTHO05D006229 1.7e-16 90.9 278 32.7
BraA10t43954Z Brassica rapa HOM05D005213 ORTHO05D006229 2.2e-16 90.5 302 30.5
A10p18740 Brassica napus HOM05D005213 ORTHO05D006229 8.2e-16 88.6 302 30.1
CDE05G3450 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 8.2e-16 88.6 190 37.4
CDE05G3316 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 1.1e-15 88.2 199 36.2
HanXRQChr09g0261901 Helianthus annuus HOM05D005213 ORTHO05D006229 1.1e-15 88.2 209 36.8
A03p10500 Brassica napus HOM05D005213 ORTHO05D006229 1.8e-15 87.4 292 33.6
Lj7P206T8 Lonicera japonica HOM05D005213 ORTHO05D006229 1.8e-15 87.4 147 44.9
C09p54690 Brassica napus HOM05D005213 ORTHO05D006229 3.1e-15 86.7 269 39.8
BolC9t58333H Brassica oleracea HOM05D005213 ORTHO05D006229 3.1e-15 86.7 269 39.8
ECA236G4272 Erigeron canadensis HOM05D005213 ORTHO05D006229 3.1e-15 86.7 234 36.8
unitig_32.g10930 Utricularia gibba HOM05D005213 ORTHO05D006229 3.1e-15 86.7 261 36.0
C03p12080 Brassica napus HOM05D005213 ORTHO05D006229 4.1e-15 86.3 261 35.2
Atru.chr7.1814 Acer truncatum HOM05D005213 ORTHO05D006229 5.3e-15 85.9 104 51.9
BcaC01g06616 Brassica carinata HOM05D005213 ORTHO05D006229 5.3e-15 85.9 261 35.2
BolC3t13679H Brassica oleracea HOM05D005213 ORTHO05D006229 5.3e-15 85.9 261 35.2
BcaC04g19528 Brassica carinata HOM05D005213 ORTHO05D006229 7.0e-15 85.5 304 31.9
PSO223G0037 Papaver somniferum HOM05D005213 ORTHO05D006229 9.1e-15 85.1 423 26.7
Zm00001eb019450 Zea mays HOM05D005213 ORTHO05D006229 9.1e-15 85.1 245 32.2
Actinidia27819 Actinidia chinensis HOM05D005213 ORTHO05D006229 2.0e-14 84.0 159 40.9
Aa31LG1G13440 Aethionema arabicum HOM05D005213 ORTHO05D006229 2.0e-14 84.0 219 34.2
Psat6g023400 Pisum sativum HOM05D005213 ORTHO05D006229 1.3e-13 81.3 90 53.3
ClCG08G009670 Citrullus lanatus HOM05D005213 ORTHO05D006229 1.7e-13 80.9 224 33.5
Solyc08g067270.3 Solanum lycopersicum HOM05D005213 ORTHO05D006229 2.9e-13 80.1 74 58.1
Sopen08g021200 Solanum pennellii HOM05D005213 ORTHO05D006229 2.9e-13 80.1 74 58.1
vmacro08659 Vaccinium macrocarpon HOM05D005213 ORTHO05D006229 5.0e-13 79.3 153 44.4
MELO3C026560.2 Cucumis melo HOM05D005213 ORTHO05D006229 1.5e-12 77.8 157 38.9
BcaB01g04752 Brassica carinata HOM05D005213 ORTHO05D006229 5.5e-12 75.9 120 46.7
ECA234G4818 Erigeron canadensis HOM05D005213 ORTHO05D006229 7.2e-12 75.5 197 34.0
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 1.2e-11 74.7 135 43.0
Hma1.2p1_0920F.1_g236590 Hydrangea macrophylla HOM05D005213 ORTHO05D006229 5.2e-10 69.3 215 32.6
BraA03t10362Z Brassica rapa HOM05D005213 ORTHO05D006229 1.5e-09 67.8 42 83.3
MELO3C016931.2 Cucumis melo HOM05D005213 ORTHO05D006229 3.3e-09 66.6 299 27.8
CsaV3_4G036220 Cucumis sativus L. HOM05D005213 ORTHO05D006229 9.7e-09 65.1 292 30.5
ClCG05G015950 Citrullus lanatus HOM05D005213 ORTHO05D006229 1.3e-08 64.7 127 39.4
Oeu030214.1 Olea europaea HOM05D005213 ORTHO05D006229 1.3e-08 64.7 283 33.2
Phvul.001G044300 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 1.1e-07 61.6 161 34.8
Phvul.001G044400 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 1.1e-07 61.6 152 34.9
Phvul.001G044200 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 1.4e-07 61.2 157 35.7
Lalb_Chr08g0244621 Lupinus albus HOM05D005213 ORTHO05D006229 9.1e-07 58.5 73 41.1
HPP92_013274 Vanilla planifolia HOM05D005213 ORTHO05D006229 2.7e-06 57.0 48 68.8
Zm00001eb109280 Zea mays HOM05D005213 ORTHO05D006229 5.9e-06 55.8 59 57.6
Actinidia26432 Actinidia chinensis HOM05D005213 ORTHO05D006229 7.7e-06 55.5 66 48.5


User provided reference genes

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