Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow8G0140 Salvia bowleyana HOM05D007238 ORTHO05D009206 5.1e-225 784.3 443 100.0
Oeu046801.1 Olea europaea HOM05D007238 ORTHO05D009206 1.1e-118 431.0 409 64.1
Dinv22874 Davidia involucrata HOM05D007238 ORTHO05D009206 3.6e-106 389.4 414 60.1
GSVIVG01022787001 Vitis vinifera HOM05D007238 ORTHO05D009206 1.4e-105 387.5 437 56.3
Migut.E01348 Erythranthe guttata HOM05D007238 ORTHO05D009206 1.5e-104 384.0 399 61.7
Cc08_g05060 Coffea canephora HOM05D007238 ORTHO05D009206 4.4e-104 382.5 413 58.1
Thecc.03G317700 Theobroma cacao HOM05D007238 ORTHO05D009206 1.9e-102 377.1 413 57.6
Dinv28012 Davidia involucrata HOM05D007238 ORTHO05D009206 9.3e-102 374.8 410 57.8
Atru.chr6.1480 Acer truncatum HOM05D007238 ORTHO05D009206 1.2e-101 374.4 404 57.9
Ciclev10000885m.g Citrus clementina HOM05D007238 ORTHO05D009206 1.6e-101 374.0 420 56.2
Gohir.D12G205200 Gossypium hirsutum HOM05D007238 ORTHO05D009206 3.3e-99 366.3 412 55.1
CSS0038403 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 5.3e-97 359.0 413 57.9
Lj8C334G11 Lonicera japonica HOM05D007238 ORTHO05D009206 6.9e-97 358.6 407 56.0
CiPaw.12G071800 Carya illinoinensis HOM05D007238 ORTHO05D009206 1.2e-96 357.8 409 55.5
Gohir.A12G202500 Gossypium hirsutum HOM05D007238 ORTHO05D009206 2.0e-96 357.1 385 56.9
Gorai.008G220100 Gossypium raimondii HOM05D007238 ORTHO05D009206 2.0e-96 357.1 386 56.7
Potri.001G130800 Populus trichocarpa HOM05D007238 ORTHO05D009206 2.2e-95 353.6 411 54.7
DCAR_004239 Daucus carota HOM05D007238 ORTHO05D009206 1.4e-94 350.9 444 56.1
Manes.17G003400 Manihot esculenta HOM05D007238 ORTHO05D009206 1.9e-94 350.5 406 55.2
Potri.003G103100 Populus trichocarpa HOM05D007238 ORTHO05D009206 2.1e-93 347.1 439 52.4
Actinidia01264 Actinidia chinensis HOM05D007238 ORTHO05D009206 3.5e-93 346.3 404 55.2
Cfa012591 Carpinus fangiana HOM05D007238 ORTHO05D009206 3.5e-93 346.3 415 54.7
Rhsim11G0025000 Rhododendron simsii HOM05D007238 ORTHO05D009206 1.7e-92 344.0 397 56.9
Aqoxy3G02024 Aquilegia oxysepala HOM05D007238 ORTHO05D009206 8.7e-92 341.7 409 53.1
RcHm_v2.0_Chr7g0213421 Rosa chinensis HOM05D007238 ORTHO05D009206 8.7e-92 341.7 413 54.5
Nitab4.5_0002930g0030 Nicotiana tabacum HOM05D007238 ORTHO05D009206 9.6e-91 338.2 418 53.6
Duzib205G0751 Durio zibethinus HOM05D007238 ORTHO05D009206 2.1e-90 337.0 435 51.5
FvH4_5g23980 Fragaria vesca HOM05D007238 ORTHO05D009206 8.1e-90 335.1 414 53.9
TWI36G0279 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 8.1e-90 335.1 413 53.5
FAN13G1136 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.1e-89 334.7 413 53.0
DCAR_008182 Daucus carota HOM05D007238 ORTHO05D009206 4.0e-89 332.8 432 50.7
Sabra03G0070300 Salix brachista HOM05D007238 ORTHO05D009206 2.6e-88 330.1 445 51.2
MD00G1002000 Malus domestica HOM05D007238 ORTHO05D009206 3.8e-87 326.2 409 53.5
Nitab4.5_0000030g0130 Nicotiana tabacum HOM05D007238 ORTHO05D009206 6.4e-87 325.5 421 52.5
Sopen08g024410 Solanum pennellii HOM05D007238 ORTHO05D009206 6.4e-87 325.5 423 51.3
Sed0015204 Sechium edule HOM05D007238 ORTHO05D009206 8.4e-87 325.1 413 51.1
Solyc08g075760.3 Solanum lycopersicum HOM05D007238 ORTHO05D009206 9.3e-86 321.6 424 50.5
Lsat_1_v5_gn_3_92801 Lactuca sativa HOM05D007238 ORTHO05D009206 2.7e-85 320.1 402 52.2
CsaV3_3G001050 Cucumis sativus L. HOM05D007238 ORTHO05D009206 1.0e-84 318.2 411 50.9
ECA233G5138 Erigeron canadensis HOM05D007238 ORTHO05D009206 1.3e-84 317.8 428 50.9
TWI56G0348 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 1.3e-84 317.8 407 52.6
MD06G1015600 Malus domestica HOM05D007238 ORTHO05D009206 1.8e-84 317.4 416 53.1
HanXRQChr03g0081381 Helianthus annuus HOM05D007238 ORTHO05D009206 2.3e-84 317.0 410 52.2
CANSAT21G2527 Cannabis sativa HOM05D007238 ORTHO05D009206 3.0e-84 316.6 438 50.5
PGR031G3591 Punica granatum HOM05D007238 ORTHO05D009206 1.5e-83 314.3 418 51.9
TAR629G0677 Trochodendron aralioides HOM05D007238 ORTHO05D009206 3.3e-83 313.2 412 51.9
Eucgr.D02592 Eucalyptus grandis HOM05D007238 ORTHO05D009206 9.6e-83 311.6 416 50.7
FAN18G0294 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.1e-81 308.1 474 47.0
CAN.G1363.6 Capsicum annuum HOM05D007238 ORTHO05D009206 1.4e-81 307.8 403 51.9
Haze_08066 Corylus avellana HOM05D007238 ORTHO05D009206 1.8e-81 307.4 496 44.4
PGSC0003DMG400030852 Solanum tuberosum HOM05D007238 ORTHO05D009206 1.8e-81 307.4 421 49.6
MELO3C013794.2 Cucumis melo HOM05D007238 ORTHO05D009206 3.1e-81 306.6 384 52.6
FAN08G1858 Fragaria x ananassa HOM05D007238 ORTHO05D009206 5.3e-81 305.8 473 46.3
FAN18G2161 Fragaria x ananassa HOM05D007238 ORTHO05D009206 2.0e-80 303.9 475 46.9
Actinidia32774 Actinidia chinensis HOM05D007238 ORTHO05D009206 4.5e-80 302.8 405 51.1
Lj2g0008424 Lotus japonicus HOM05D007238 ORTHO05D009206 1.3e-79 301.2 408 51.7
vmacro00062 Vaccinium macrocarpon HOM05D007238 ORTHO05D009206 9.3e-78 295.0 375 53.6
FAN04G0931 Fragaria x ananassa HOM05D007238 ORTHO05D009206 5.1e-76 289.3 425 47.3
PSO063G0400 Papaver somniferum HOM05D007238 ORTHO05D009206 1.9e-75 287.3 437 48.5
VMungo1215G3455 Vigna mungo HOM05D007238 ORTHO05D009206 1.4e-73 281.2 408 49.5
TPR.G17266 Trifolium pratense HOM05D007238 ORTHO05D009206 4.1e-73 279.6 406 49.3
ClCG10G001020 Citrullus lanatus HOM05D007238 ORTHO05D009206 6.9e-73 278.9 411 47.7
Glyma.01G149500 Glycine max HOM05D007238 ORTHO05D009206 1.2e-72 278.1 411 49.1
ATR0829G060 Amborella trichopoda HOM05D007238 ORTHO05D009206 1.5e-72 277.7 407 47.9
Ca_25102_v3 Cicer arietinum L. HOM05D007238 ORTHO05D009206 2.6e-72 276.9 416 49.0
PSO782G1267 Papaver somniferum HOM05D007238 ORTHO05D009206 5.8e-72 275.8 418 48.8
Peaxi162Scf02295g00022 Petunia axillaris HOM05D007238 ORTHO05D009206 5.0e-71 272.7 368 49.7
Medtr5g026850 Medicago truncatula HOM05D007238 ORTHO05D009206 6.5e-71 272.3 410 48.5
Phvul.002G128600 Phaseolus vulgaris HOM05D007238 ORTHO05D009206 1.1e-70 271.6 412 48.5
Glyma.09G213700 Glycine max HOM05D007238 ORTHO05D009206 3.2e-70 270.0 420 47.4
Os06g0115600 Oryza sativa ssp. japonica HOM05D007238 ORTHO05D009206 7.1e-70 268.9 407 45.9
Lalb_Chr05g0215441 Lupinus albus HOM05D007238 ORTHO05D009206 1.3e-68 264.6 414 47.3
Zm00001eb378870 Zea mays HOM05D007238 ORTHO05D009206 8.7e-68 261.9 407 44.7
arahy.Tifrunner.gnm1.ann1.0046K4 Arachis hypogaea HOM05D007238 ORTHO05D009206 1.5e-67 261.2 403 47.4
arahy.Tifrunner.gnm1.ann1.BJTL8K Arachis hypogaea HOM05D007238 ORTHO05D009206 1.5e-67 261.2 403 47.4
Zm00001eb269110 Zea mays HOM05D007238 ORTHO05D009206 1.2e-64 251.5 417 42.4
Prupe.5G020000 Prunus persica HOM05D007238 ORTHO05D009206 2.1e-53 214.2 385 44.2
Cpa.g.sc90.44 Carica papaya HOM05D007238 ORTHO05D009206 5.0e-47 193.0 309 45.0
HanXRQChr03g0081161 Helianthus annuus HOM05D007238 ORTHO05D009206 1.6e-40 171.4 311 43.1
PSO782G4691 Papaver somniferum HOM05D007238 ORTHO05D009206 2.5e-38 164.1 301 43.9
Psat2g142200 Pisum sativum HOM05D007238 ORTHO05D009206 1.6e-37 161.4 299 42.5
Hma1.2p1_1933F.1_g308070 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 7.0e-33 146.0 166 59.6
HanXRQChr17g0554671 Helianthus annuus HOM05D007238 ORTHO05D009206 8.3e-26 122.5 163 50.3
HPP92_002457 Vanilla planifolia HOM05D000907 ORTHO05D000753 9.1e-25 119.0 141 54.6
Duzib068G0324 Durio zibethinus HOM05D007238 ORTHO05D009206 1.6e-24 118.2 79 78.5
SEGI_10751 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 1.6e-21 108.2 315 34.3
SEGI_32460 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 2.8e-21 107.5 75 76.0
HPP92_025938 Vanilla planifolia HOM05D007238 ORTHO05D009206 1.4e-20 105.1 71 77.5
HPP92_022728 Vanilla planifolia HOM05D007238 ORTHO05D009206 9.8e-19 99.0 234 37.2
CSS0023317 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 2.4e-17 94.4 53 88.7
Pp3c23_22500 Physcomitrium patens HOM05D007238 ORTHO05D009206 4.3e-14 83.6 366 30.6
HanXRQChr09g0247011 Helianthus annuus HOM05D007238 ORTHO05D009206 8.9e-12 75.9 39 97.4
Actinidia14160 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.7e-10 71.6 44 79.5
AagrBONN_evm.TU.Sc2ySwM_228.587 Anthoceros agrestis HOM05D007238 ORTHO05D009206 1.4e-09 68.6 104 49.0
HanXRQChr03g0081151 Helianthus annuus HOM05D007238 ORTHO05D009206 7.0e-09 66.2 54 64.8
arahy.Tifrunner.gnm1.ann1.HBQ3NA Arachis hypogaea HOM05D007238 ORTHO05D009206 3.0e-07 60.8 60 58.3
arahy.Tifrunner.gnm1.ann1.M9N5E0 Arachis hypogaea HOM05D007238 ORTHO05D009206 3.0e-07 60.8 60 58.3
arahy.Tifrunner.gnm1.ann1.DKTU9V Arachis hypogaea HOM05D007238 ORTHO05D009206 8.6e-07 59.3 287 29.3


User provided reference genes

Program Settings