Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow8G0130 Salvia bowleyana HOM05D007895 ORTHO05D010017 8.9e-107 390.2 185 100.0
MSTRG.7225 Avicennia marina HOM05D007895 ORTHO05D010017 1.7e-65 253.1 170 71.2
Oeu033195.1 Olea europaea HOM05D007895 ORTHO05D010017 3.7e-60 235.3 170 65.3
Hma1.2p1_0057F.1_g031900 Hydrangea macrophylla HOM05D007895 ORTHO05D010017 3.1e-59 232.3 170 64.1
CSS0036667 Camellia sinensis var. sinensis HOM05D007895 ORTHO05D010017 4.0e-59 231.9 170 62.4
Sabra11G0000700 Salix brachista HOM05D007895 ORTHO05D010017 1.2e-58 230.3 170 62.9
Glyma.13G205700 Glycine max HOM05D007895 ORTHO05D010017 1.5e-58 229.9 170 62.9
Gohir.D05G172500 Gossypium hirsutum HOM05D007895 ORTHO05D010017 1.5e-58 229.9 183 60.7
Gohir.A05G169300 Gossypium hirsutum HOM05D007895 ORTHO05D010017 2.0e-58 229.6 170 62.9
Gorai.009G177700 Gossypium raimondii HOM05D007895 ORTHO05D010017 2.6e-58 229.2 183 60.1
Dinv13880 Davidia involucrata HOM05D007895 ORTHO05D010017 4.5e-58 228.4 170 62.4
Glyma.15G106800 Glycine max HOM05D007895 ORTHO05D010017 5.8e-58 228.0 170 62.9
COL.COLO4_31754 Corchorus olitorius HOM05D007895 ORTHO05D010017 1.0e-57 227.3 170 61.2
PGR004G2409 Punica granatum HOM05D007895 ORTHO05D010017 1.0e-57 227.3 170 61.8
Nitab4.5_0003254g0060 Nicotiana tabacum HOM05D007895 ORTHO05D010017 1.7e-57 226.5 170 61.8
TPR.G7647 Trifolium pratense HOM05D007895 ORTHO05D010017 1.7e-57 226.5 170 60.0
Cfa000239 Carpinus fangiana HOM05D007895 ORTHO05D010017 2.2e-57 226.1 170 63.5
Rhsim13G0155200 Rhododendron simsii HOM05D007895 ORTHO05D010017 2.9e-57 225.7 169 63.3
CiPaw.09G090200 Carya illinoinensis HOM05D007895 ORTHO05D010017 4.9e-57 224.9 170 62.9
MD10G1319500 Malus domestica HOM05D007895 ORTHO05D010017 4.9e-57 224.9 170 61.2
THA.LOC104806298 Tarenaya hassleriana HOM05D007895 ORTHO05D010017 4.9e-57 224.9 171 64.9
VMungo0540G0331 Vigna mungo HOM05D007895 ORTHO05D010017 4.9e-57 224.9 170 61.8
Duzib235G1140 Durio zibethinus HOM05D007895 ORTHO05D010017 6.5e-57 224.6 170 61.8
Thecc.06G218400 Theobroma cacao HOM05D007895 ORTHO05D010017 8.4e-57 224.2 170 61.2
Cpa.g.sc189.18 Carica papaya HOM05D007895 ORTHO05D010017 1.4e-56 223.4 170 61.8
MD05G1343800 Malus domestica HOM05D007895 ORTHO05D010017 3.2e-56 222.2 170 61.8
Prupe.4G023000 Prunus persica HOM05D007895 ORTHO05D010017 3.2e-56 222.2 170 61.8
QL05p073549 Quercus lobata HOM05D007895 ORTHO05D010017 3.2e-56 222.2 170 61.2
QL05p073789 Quercus lobata HOM05D007895 ORTHO05D010017 3.2e-56 222.2 170 61.2
Lalb_Chr15g0087521 Lupinus albus HOM05D007895 ORTHO05D010017 4.2e-56 221.9 170 61.8
GSVIVG01002953001 Vitis vinifera HOM05D007895 ORTHO05D010017 4.2e-56 221.9 170 60.6
Manes.17G037900 Manihot esculenta HOM05D007895 ORTHO05D010017 5.5e-56 221.5 170 61.2
Medtr2g022910 Medicago truncatula HOM05D007895 ORTHO05D010017 7.1e-56 221.1 170 58.2
Nitab4.5_0007482g0010 Nicotiana tabacum HOM05D007895 ORTHO05D010017 9.3e-56 220.7 170 60.0
Potri.011G001800 Populus trichocarpa HOM05D007895 ORTHO05D010017 9.3e-56 220.7 170 61.8
TAR627G0668 Trochodendron aralioides HOM05D007895 ORTHO05D010017 1.2e-55 220.3 170 60.0
Lj6g0014344 Lotus japonicus HOM05D007895 ORTHO05D010017 2.7e-55 219.2 170 60.0
TWI63G1238 Tripterygium wilfordii HOM05D007895 ORTHO05D010017 2.7e-55 219.2 170 61.8
Phvul.006G150500 Phaseolus vulgaris HOM05D007895 ORTHO05D010017 4.6e-55 218.4 170 61.2
RcHm_v2.0_Chr5g0003541 Rosa chinensis HOM05D007895 ORTHO05D010017 1.0e-54 217.2 170 60.0
CAN.G569.16 Capsicum annuum HOM05D007895 ORTHO05D010017 1.3e-54 216.9 170 60.6
Lalb_Chr18g0056281 Lupinus albus HOM05D007895 ORTHO05D010017 1.3e-54 216.9 171 60.2
Cc00_g03030 Coffea canephora HOM05D007895 ORTHO05D010017 1.8e-54 216.5 170 60.0
FvH4_3g02321 Fragaria vesca HOM05D007895 ORTHO05D010017 2.3e-54 216.1 170 60.0
Lsat_1_v5_gn_7_17681 Lactuca sativa HOM05D007895 ORTHO05D010017 3.9e-54 215.3 169 58.0
Psat1g181720 Pisum sativum HOM05D007895 ORTHO05D010017 3.9e-54 215.3 171 57.9
BcaC09g51191 Brassica carinata HOM05D007895 ORTHO05D010017 8.7e-54 214.2 185 57.8
C01p15890 Brassica napus HOM05D007895 ORTHO05D010017 8.7e-54 214.2 185 57.8
BolC1t01543H Brassica oleracea HOM05D007895 ORTHO05D010017 1.1e-53 213.8 185 57.8
Thhalv10026963m.g Eutrema salsugineum HOM05D007895 ORTHO05D010017 1.1e-53 213.8 171 60.2
Cc09_g01830 Coffea canephora HOM05D007895 ORTHO05D010017 1.5e-53 213.4 170 60.0
DCAR_004211 Daucus carota HOM05D007895 ORTHO05D010017 9.6e-53 210.7 170 57.6
AT4G21890 Arabidopsis thaliana HOM05D007895 ORTHO05D010017 1.3e-52 210.3 171 59.6
CANSAT56G1122 Cannabis sativa HOM05D007895 ORTHO05D010017 1.6e-52 209.9 171 60.2
MBI18_g12452_MAGBIO Magnolia biondii HOM05D007895 ORTHO05D010017 2.1e-52 209.5 171 56.7
BcaNung02255 Brassica carinata HOM05D007895 ORTHO05D010017 8.2e-52 207.6 172 58.7
EL10Ac8g20029 Beta vulgaris HOM05D007895 ORTHO05D010017 1.4e-51 206.8 170 55.9
A01p13190 Brassica napus HOM05D007895 ORTHO05D010017 1.8e-51 206.5 185 56.2
BraA01t01263Z Brassica rapa HOM05D007895 ORTHO05D010017 1.8e-51 206.5 185 56.2
Ah.09g235010 Amaranthus hybridus HOM05D007895 ORTHO05D010017 3.1e-51 205.7 170 54.1
ATR0752G052 Amborella trichopoda HOM05D007895 ORTHO05D010017 5.3e-51 204.9 170 57.1
Carub.0007s1948 Capsella rubella HOM05D007895 ORTHO05D010017 9.0e-51 204.1 168 57.1
CARHR228650 Cardamine hirsuta HOM05D007895 ORTHO05D010017 9.0e-51 204.1 172 57.6
AUR62021973 Chenopodium quinoa HOM05D007895 ORTHO05D010017 5.9e-50 201.4 170 57.1
AUR62012684 Chenopodium quinoa HOM05D007895 ORTHO05D010017 1.7e-49 199.9 170 56.5
Sp7g20040 Schrenkiella parvula HOM05D007895 ORTHO05D010017 8.5e-49 197.6 171 56.7
CDE05G3159 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 2.8e-44 182.6 170 50.6
CDE02G0632 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 1.2e-42 177.2 170 50.6
Aa31LG6G3880 Aethionema arabicum HOM05D007895 ORTHO05D010017 3.4e-42 175.6 172 48.3
Ciclev10017921m.g Citrus clementina HOM05D007895 ORTHO05D010017 2.6e-37 159.5 170 48.8
AagrBONN_evm.TU.Sc2ySwM_117.3222 Anthoceros agrestis HOM05D007895 ORTHO05D010017 2.6e-29 132.9 174 40.8
Aqoxy1G03251 Aquilegia oxysepala HOM05D007895 ORTHO05D010017 3.3e-29 132.5 123 52.0
Mapoly0063s0045 Marchantia polymorpha HOM05D007895 ORTHO05D010017 2.8e-28 129.4 153 42.5
SMO351G0184 Selaginella moellendorffii HOM05D007895 ORTHO05D010017 1.4e-22 110.5 155 38.7
Mapoly0021s0002 Marchantia polymorpha HOM05D007895 ORTHO05D010017 1.5e-21 107.1 174 35.1
Sc05g0009090 Simmondsia chinensis HOM05D007895 ORTHO05D010017 3.2e-16 89.4 88 50.0
HPP92_001781 Vanilla planifolia HOM05D007895 ORTHO05D010017 1.2e-13 80.9 81 50.6
CAN.G328.16 Capsicum annuum HOM05D007895 ORTHO05D010017 8.0e-07 58.2 57 50.9


User provided reference genes

Program Settings