Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow8G0106 Salvia bowleyana HOM05D018911 ORTHO05D014278 2.2e-60 235.7 147 100.0
SalBow5G3618 Salvia bowleyana HOM05D018911 ORTHO05D014278 2.2e-39 166.0 147 68.7
SalBow3G2046 Salvia bowleyana HOM05D018911 ORTHO05D014278 1.7e-23 113.2 70 98.6
SalBow5G3446 Salvia bowleyana HOM05D018911 ORTHO05D014278 2.7e-21 105.9 72 91.7
SalBow8G3057 Salvia bowleyana HOM05D018911 ORTHO05D014278 3.3e-19 99.0 151 47.0
Migut.K00705 Erythranthe guttata HOM05D000169 ORTHO05D000542 9.8e-16 87.4 121 47.1
SalBow8G3432 Salvia bowleyana HOM05D018911 ORTHO05D014278 2.2e-15 86.3 59 83.1
SalBow1G4657 Salvia bowleyana HOM05D053451 ORTHO05D014278 3.1e-14 82.4 149 44.3
SGA_v2.0_scaffold9G04774 Striga asiatica HOM05D000169 ORTHO05D000542 3.6e-10 68.9 159 39.0
vmacro01079 Vaccinium macrocarpon HOM05D000169 ORTHO05D000542 3.1e-09 65.9 136 36.8
QL03p054621 Quercus lobata HOM05D000169 ORTHO05D000542 1.5e-08 63.5 123 37.4
TAR374G1491 Trochodendron aralioides HOM05D000169 ORTHO05D000542 1.5e-08 63.5 140 35.7
Haze_07248 Corylus avellana HOM05D000169 ORTHO05D000542 2.0e-08 63.2 129 36.4
TWI14G0164 Tripterygium wilfordii HOM05D000169 ORTHO05D000542 2.6e-08 62.8 132 34.8
CSS0042442 Camellia sinensis var. sinensis HOM05D000169 ORTHO05D014278 5.8e-08 61.6 120 40.0
Nitab4.5_0000559g0220 Nicotiana tabacum HOM05D000169 ORTHO05D000542 9.8e-08 60.8 134 34.3
Nitab4.5_0006819g0070 Nicotiana tabacum HOM05D000169 ORTHO05D000542 9.8e-08 60.8 131 34.4
Eucgr.B00135 Eucalyptus grandis HOM05D000169 ORTHO05D000542 1.3e-07 60.5 135 32.6
Cfa018865 Carpinus fangiana HOM05D000169 ORTHO05D000542 1.7e-07 60.1 127 34.6
Cpa.g.sc43.31 Carica papaya HOM05D000169 ORTHO05D000542 2.2e-07 59.7 132 35.6
Nitab4.5_0003680g0060 Nicotiana tabacum HOM05D000169 ORTHO05D000542 2.9e-07 59.3 147 33.3
Cpa.g.sc13.155 Carica papaya HOM05D000169 ORTHO05D000542 3.7e-07 58.9 48 60.4
Peaxi162Scf00089g00045 Petunia axillaris HOM05D000169 ORTHO05D000542 6.4e-07 58.2 147 33.3
Potri.010G057000 Populus trichocarpa HOM05D000169 ORTHO05D000542 6.4e-07 58.2 126 35.7
COL.COLO4_12815 Corchorus olitorius HOM05D000169 ORTHO05D000542 1.1e-06 57.4 146 34.9
Lsat_1_v5_gn_8_149641 Lactuca sativa HOM05D000169 ORTHO05D000542 1.1e-06 57.4 135 33.3
Sabra15G0114100 Salix brachista HOM05D000169 ORTHO05D000542 1.1e-06 57.4 60 48.3
Hma1.2p1_1954F.1_g308910 Hydrangea macrophylla HOM05D000169 ORTHO05D000542 1.4e-06 57.0 131 34.4
Nitab4.5_0001664g0060 Nicotiana tabacum HOM05D000169 ORTHO05D000542 1.4e-06 57.0 147 33.3
Psat5g140320 Pisum sativum HOM05D000169 ORTHO05D000542 1.4e-06 57.0 48 52.1
Sabra12G0069500 Salix brachista HOM05D000169 ORTHO05D000542 1.9e-06 56.6 60 48.3
CiPaw.12G037000 Carya illinoinensis HOM05D000169 ORTHO05D000542 2.4e-06 56.2 137 32.1
Peaxi162Scf00700g00139 Petunia axillaris HOM05D000169 ORTHO05D000542 2.4e-06 56.2 141 33.3
Duzib264G1255 Durio zibethinus HOM05D000169 ORTHO05D000542 3.2e-06 55.8 120 32.5
Gorai.001G060700 Gossypium raimondii HOM05D000169 ORTHO05D000542 3.2e-06 55.8 48 58.3
GSVIVG01008498001 Vitis vinifera HOM05D000169 ORTHO05D000542 3.2e-06 55.8 134 36.6
MELO3C035535.2 Cucumis melo HOM05D000169 ORTHO05D000542 4.1e-06 55.5 126 33.3
PGR083G2761 Punica granatum HOM05D000169 ORTHO05D000542 4.1e-06 55.5 48 54.2
ClCG03G003610 Citrullus lanatus HOM05D000169 ORTHO05D000542 5.4e-06 55.1 120 31.7
Manes.14G053850 Manihot esculenta HOM05D000169 ORTHO05D000542 5.4e-06 55.1 53 50.9
Potri.015G092300 Populus trichocarpa HOM05D000169 ORTHO05D000542 5.4e-06 55.1 50 54.0
Thecc.03G125200 Theobroma cacao HOM05D000169 ORTHO05D000542 5.4e-06 55.1 133 30.1
TWI39G0411 Tripterygium wilfordii HOM05D000169 ORTHO05D000542 5.4e-06 55.1 135 30.4
MELO3C002346.2 Cucumis melo HOM05D000169 ORTHO05D000542 7.0e-06 54.7 47 57.4
Gohir.A07G052800 Gossypium hirsutum HOM05D000169 ORTHO05D000542 7.0e-06 54.7 114 34.2
Gohir.A09G246000 Gossypium hirsutum HOM05D000169 ORTHO05D000542 7.0e-06 54.7 48 56.2
Gohir.D09G246500 Gossypium hirsutum HOM05D000169 ORTHO05D000542 7.0e-06 54.7 48 56.2
Gorai.006G271000 Gossypium raimondii HOM05D000169 ORTHO05D000542 7.0e-06 54.7 48 56.2
Lj6C822T17 Lonicera japonica HOM05D000169 ORTHO05D000542 7.0e-06 54.7 135 34.8
MD14G1161200 Malus domestica HOM05D000169 ORTHO05D000542 7.0e-06 54.7 134 35.8
Nn3g16530 Nelumbo nucifera HOM05D000169 ORTHO05D000542 7.0e-06 54.7 130 33.8
Potri.012G094800 Populus trichocarpa HOM05D000169 ORTHO05D000542 7.0e-06 54.7 60 46.7
CsaV3_1G009460 Cucumis sativus L. HOM05D000169 ORTHO05D000542 9.2e-06 54.3 47 57.4
Duzib068G0011 Durio zibethinus HOM05D000169 ORTHO05D000542 9.2e-06 54.3 125 32.8
Eucgr.B03468 Eucalyptus grandis HOM05D000169 ORTHO05D000542 9.2e-06 54.3 161 31.7
Potri.012G094900 Populus trichocarpa HOM05D000169 ORTHO05D000542 9.2e-06 54.3 48 54.2
Potri.012G095000 Populus trichocarpa HOM05D000169 ORTHO05D000542 9.2e-06 54.3 48 54.2
Sabra12G0069600 Salix brachista HOM05D000169 ORTHO05D000542 9.2e-06 54.3 48 54.2


User provided reference genes

Program Settings