Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4791 Salvia bowleyana HOM05D003443 ORTHO05D008640 6.9e-63 243.8 125 100.0
SalBow7G2413 Salvia bowleyana HOM05D003443 ORTHO05D008640 3.8e-61 238.0 126 98.4
Migut.C01148 Erythranthe guttata HOM05D003443 ORTHO05D008640 4.5e-46 188.0 121 79.3
SGA_v2.0_scaffold52G18981 Striga asiatica HOM05D003443 ORTHO05D008640 2.2e-45 185.7 123 76.4
MSTRG.1460 Avicennia marina HOM05D003443 ORTHO05D008640 6.3e-40 167.5 121 70.2
Nitab4.5_0002883g0010 Nicotiana tabacum HOM05D003443 ORTHO05D008640 2.4e-31 139.0 124 60.5
Dinv40389 Davidia involucrata HOM05D003443 ORTHO05D008640 2.0e-30 136.0 137 56.9
Nitab4.5_0001926g0050 Nicotiana tabacum HOM05D003443 ORTHO05D008640 2.7e-30 135.6 126 58.7
Solyc11g013020.2 Solanum lycopersicum HOM05D003443 ORTHO05D008640 5.9e-30 134.4 125 58.4
CAN.G513.1 Capsicum annuum HOM05D003443 ORTHO05D008640 7.8e-30 134.0 121 57.0
Gorai.009G244100 Gossypium raimondii HOM05D003443 ORTHO05D008640 7.8e-30 134.0 128 58.6
Medtr5g058660 Medicago truncatula HOM05D003443 ORTHO05D008640 7.8e-30 134.0 120 57.5
Medtr5g059030 Medicago truncatula HOM05D003443 ORTHO05D008640 7.8e-30 134.0 120 57.5
PGSC0003DMG400000906 Solanum tuberosum HOM05D003443 ORTHO05D008640 1.0e-29 133.7 124 58.1
Cc10_g11000 Coffea canephora HOM05D003443 ORTHO05D008640 1.7e-29 132.9 126 58.7
PSO170G0931 Papaver somniferum HOM05D003443 ORTHO05D008640 1.7e-29 132.9 128 57.0
Sopen11g007760 Solanum pennellii HOM05D003443 ORTHO05D008640 1.7e-29 132.9 124 58.1
unitig_747.g21488 Utricularia gibba HOM05D003443 ORTHO05D008640 1.7e-29 132.9 120 56.7
Gohir.D05G235800 Gossypium hirsutum HOM05D003443 ORTHO05D008640 2.3e-29 132.5 128 57.8
Gohir.A05G233400 Gossypium hirsutum HOM05D003443 ORTHO05D008640 2.9e-29 132.1 128 57.0
Peaxi162Scf00395g00717 Petunia axillaris HOM05D003443 ORTHO05D008640 3.8e-29 131.7 126 54.8
Thecc.08G121300 Theobroma cacao HOM05D003443 ORTHO05D008640 3.8e-29 131.7 129 55.8
CiPaw.05G224500 Carya illinoinensis HOM05D003443 ORTHO05D008640 6.6e-29 131.0 129 55.0
CSS0034050 Camellia sinensis var. sinensis HOM05D003443 ORTHO05D008640 8.6e-29 130.6 139 52.5
Peaxi162Scf00198g00098 Petunia axillaris HOM05D003443 ORTHO05D008640 1.1e-28 130.2 126 54.0
MD03G1200300 Malus domestica HOM05D003443 ORTHO05D008640 1.5e-28 129.8 127 54.3
MD15G1353300 Malus domestica HOM05D003443 ORTHO05D008640 1.5e-28 129.8 127 54.3
Psat2g087720 Pisum sativum HOM05D003443 ORTHO05D008640 1.5e-28 129.8 127 55.1
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 1.9e-28 129.4 129 55.8
Prupe.1G501600 Prunus persica HOM05D003443 ORTHO05D008640 1.9e-28 129.4 123 56.1
Haze_00480 Corylus avellana HOM05D003443 ORTHO05D008640 2.5e-28 129.0 129 53.5
RcHm_v2.0_Chr6g0295401 Rosa chinensis HOM05D003443 ORTHO05D008640 2.5e-28 129.0 122 53.3
Atru.chr13.1408 Acer truncatum HOM05D003443 ORTHO05D008640 3.3e-28 128.6 127 55.9
Actinidia23064 Actinidia chinensis HOM05D003443 ORTHO05D008640 3.3e-28 128.6 133 52.6
Sabra02G0067600 Salix brachista HOM05D003443 ORTHO05D008640 4.3e-28 128.3 128 55.5
VMungo0647G0179 Vigna mungo HOM05D003443 ORTHO05D008640 5.6e-28 127.9 124 55.6
Actinidia02607 Actinidia chinensis HOM05D003443 ORTHO05D008640 7.3e-28 127.5 136 52.2
Lalb_Chr10g0101911 Lupinus albus HOM05D003443 ORTHO05D008640 7.3e-28 127.5 123 55.3
QL08p024382 Quercus lobata HOM05D003443 ORTHO05D008640 7.3e-28 127.5 127 54.3
arahy.Tifrunner.gnm1.ann1.ZIXY5S Arachis hypogaea HOM05D003443 ORTHO05D008640 9.5e-28 127.1 132 50.8
DCAR_014106 Daucus carota HOM05D003443 ORTHO05D008640 1.2e-27 126.7 132 50.8
GSVIVG01008902001 Vitis vinifera HOM05D003443 ORTHO05D008640 1.6e-27 126.3 125 53.6
Hma1.2p1_0073F.1_g038390 Hydrangea macrophylla HOM05D003443 ORTHO05D008640 2.1e-27 125.9 123 55.3
Sc01g0001350 Simmondsia chinensis HOM05D003443 ORTHO05D008640 2.1e-27 125.9 127 50.4
vmacro12548 Vaccinium macrocarpon HOM05D003443 ORTHO05D008640 2.1e-27 125.9 140 50.7
Ca_26970_v3 Cicer arietinum L. HOM05D003443 ORTHO05D008640 2.8e-27 125.6 127 53.5
arahy.Tifrunner.gnm1.ann1.B00VWE Arachis hypogaea HOM05D003443 ORTHO05D008640 3.6e-27 125.2 132 51.5
Cpa.g.sc70.11 Carica papaya HOM05D003443 ORTHO05D008640 3.6e-27 125.2 124 52.4
FAN24G2127 Fragaria x ananassa HOM05D003443 ORTHO05D008640 3.6e-27 125.2 122 53.3
Glyma.14G162600 Glycine max HOM05D003443 ORTHO05D008640 3.6e-27 125.2 125 53.6
Potri.002G086200 Populus trichocarpa HOM05D003443 ORTHO05D008640 4.7e-27 124.8 130 53.1
FAN15G0021 Fragaria x ananassa HOM05D003443 ORTHO05D008640 6.1e-27 124.4 122 54.1
Ciclev10002759m.g Citrus clementina HOM05D003443 ORTHO05D008640 8.0e-27 124.0 124 55.6
Manes.18G075200 Manihot esculenta HOM05D003443 ORTHO05D008640 8.0e-27 124.0 133 51.9
Nn4g26023 Nelumbo nucifera HOM05D003443 ORTHO05D008640 8.0e-27 124.0 128 53.1
AUR62004720 Chenopodium quinoa HOM05D003443 ORTHO05D008640 1.0e-26 123.6 133 49.6
FvH4_2g26530 Fragaria vesca HOM05D003443 ORTHO05D008640 2.3e-26 122.5 128 52.3
Lj1g0013808 Lotus japonicus HOM05D003443 ORTHO05D008640 3.0e-26 122.1 131 51.9
Rhsim06G0105400 Rhododendron simsii HOM05D003443 ORTHO05D008640 6.8e-26 120.9 139 50.4
Oeu047933.1 Olea europaea HOM05D003443 ORTHO05D008640 8.9e-26 120.6 137 50.4
Migut.G00969 Erythranthe guttata HOM05D003443 ORTHO05D008640 1.5e-25 119.8 121 58.7
CANSAT25G1680 Cannabis sativa HOM05D003443 ORTHO05D008640 5.8e-25 117.9 120 51.7
MBI06_g44272_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 5.8e-25 117.9 123 52.0
MBI15_g35999_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 5.8e-25 117.9 123 52.0
Sed0028054 Sechium edule HOM05D003443 ORTHO05D008640 5.8e-25 117.9 131 49.6
FAN27G2419 Fragaria x ananassa HOM05D003443 ORTHO05D008640 1.3e-24 116.7 120 52.5
AT4G08240 Arabidopsis thaliana HOM05D003443 ORTHO05D008640 2.2e-24 115.9 124 47.6
AL6G41970 Arabidopsis lyrata HOM05D003443 ORTHO05D008640 2.9e-24 115.5 124 47.6
THA.LOC104817138 Tarenaya hassleriana HOM05D003443 ORTHO05D008640 6.4e-24 114.4 123 48.0
HPP92_002301 Vanilla planifolia HOM05D003443 ORTHO05D008640 6.4e-24 114.4 121 49.6
Aa31LG9G14320 Aethionema arabicum HOM05D003443 ORTHO05D008640 1.1e-23 113.6 122 51.6
CsaV3_6G003590 Cucumis sativus L. HOM05D003443 ORTHO05D008640 1.4e-23 113.2 137 45.3
Thhalv10029053m.g Eutrema salsugineum HOM05D003443 ORTHO05D008640 1.9e-23 112.8 124 50.0
Carub.0006s2677 Capsella rubella HOM05D003443 ORTHO05D008640 2.4e-23 112.5 124 47.6
MELO3C011587.2 Cucumis melo HOM05D003443 ORTHO05D008640 1.6e-22 109.8 137 43.8
HanXRQChr09g0254131 Helianthus annuus HOM05D003443 ORTHO05D008640 1.6e-22 109.8 120 48.3
BcaB01g02870 Brassica carinata HOM05D003443 ORTHO05D008640 2.7e-22 109.0 126 45.2
Sp6g09810 Schrenkiella parvula HOM05D003443 ORTHO05D008640 2.7e-22 109.0 126 46.0
Aqoxy6G00163 Aquilegia oxysepala HOM05D003443 ORTHO05D008640 4.6e-22 108.2 132 46.2
CARHR259340 Cardamine hirsuta HOM05D003443 ORTHO05D008640 7.8e-22 107.5 123 48.0
Lsat_1_v5_gn_4_136221 Lactuca sativa HOM05D003443 ORTHO05D008640 7.8e-22 107.5 128 46.9
BraA03t12014Z Brassica rapa HOM05D003443 ORTHO05D008640 1.3e-21 106.7 126 46.8
BcaC01g04776 Brassica carinata HOM05D003443 ORTHO05D008640 1.7e-21 106.3 125 46.4
C03p33840 Brassica napus HOM05D003443 ORTHO05D008640 1.7e-21 106.3 125 46.4
BolC3t15700H Brassica oleracea HOM05D003443 ORTHO05D008640 1.7e-21 106.3 125 46.4
ECA232G0443 Erigeron canadensis HOM05D003443 ORTHO05D008640 2.3e-21 105.9 118 48.3
A03p27990 Brassica napus HOM05D003443 ORTHO05D008640 5.0e-21 104.8 126 45.2
MELO3C011304.2 Cucumis melo HOM05D003443 ORTHO05D008640 2.5e-20 102.4 149 40.3
MD08G1167900 Malus domestica HOM05D003443 ORTHO05D008640 1.2e-19 100.1 131 46.6
TPR.G8499 Trifolium pratense HOM05D028375 ORTHO05D008640 6.2e-19 97.8 127 44.1
ATR0121G005 Amborella trichopoda HOM05D003443 ORTHO05D008640 1.4e-18 96.7 122 45.1
AUR62023639 Chenopodium quinoa HOM05D003443 ORTHO05D008640 2.3e-18 95.9 120 44.2
Hund27039 Selenicereus undatus HOM05D003443 ORTHO05D008640 2.3e-18 95.9 205 33.2
PGR044G0044 Punica granatum HOM05D003443 ORTHO05D008640 1.2e-17 93.6 129 43.4
CDE06G0537 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 2.0e-17 92.8 108 46.3
Zm00001eb244530 Zea mays HOM05D003443 ORTHO05D008640 3.4e-17 92.0 120 43.3
CDE08G0113 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 7.5e-17 90.9 108 47.2
Phvul.008G165400 Phaseolus vulgaris HOM05D003443 ORTHO05D008640 6.4e-16 87.8 123 42.3
Os02g0567000 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D008640 2.4e-15 85.9 120 44.2
Ah.16g110170 Amaranthus hybridus HOM05D003443 ORTHO05D008640 7.0e-15 84.3 69 56.5
TAR628G1666 Trochodendron aralioides HOM05D003443 ORTHO05D008640 7.0e-15 84.3 71 60.6
Eucgr.L01689 Eucalyptus grandis HOM05D003443 ORTHO05D008640 7.8e-14 80.9 69 58.0
Duzib093G0610 Durio zibethinus HOM05D003443 ORTHO05D008640 1.3e-13 80.1 120 43.3
ClCG08G005410 Citrullus lanatus HOM05D003443 ORTHO05D008640 1.7e-13 79.7 213 29.6
SEGI_04119 Sequoiadendron giganteum HOM05D003443 ORTHO05D008640 1.7e-13 79.7 121 35.5
TWI12G0841 Tripterygium wilfordii HOM05D003443 ORTHO05D008640 2.3e-13 79.3 68 60.3
Mapoly0161s0025 Marchantia polymorpha HOM05D003443 ORTHO05D008640 3.0e-13 79.0 122 34.4
SHI33895 Sapria himalayana HOM05D003443 ORTHO05D008640 5.8e-09 64.7 124 35.5
Cfa009666 Carpinus fangiana HOM05D003443 ORTHO05D008640 8.3e-08 60.8 74 48.6


User provided reference genes

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