Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4774 Salvia bowleyana HOM05D005408 ORTHO05D006790 2.3e-105 385.6 197 100.0
SalBow8G3468 Salvia bowleyana HOM05D005408 ORTHO05D006790 9.6e-75 283.9 159 89.9
SalBow3G0714 Salvia bowleyana HOM05D005408 ORTHO05D006790 2.9e-55 219.2 253 52.6
MSTRG.21921 Avicennia marina HOM05D005408 ORTHO05D006790 2.7e-45 186.0 115 80.0
Migut.N00286 Erythranthe guttata HOM05D005408 ORTHO05D006790 9.6e-43 177.6 118 73.7
Peaxi162Scf00392g00730 Petunia axillaris HOM05D005408 ORTHO05D006790 2.1e-42 176.4 115 77.4
Nitab4.5_0000044g0530 Nicotiana tabacum HOM05D005408 ORTHO05D006790 6.2e-42 174.9 115 73.9
Solyc09g090340.3 Solanum lycopersicum HOM05D005408 ORTHO05D006790 6.2e-42 174.9 114 73.7
Sopen09g033240 Solanum pennellii HOM05D005408 ORTHO05D006790 6.2e-42 174.9 114 73.7
CAN.G220.39 Capsicum annuum HOM05D005408 ORTHO05D006790 1.1e-41 174.1 115 73.0
PGSC0003DMG400017212 Solanum tuberosum HOM05D005408 ORTHO05D006790 1.1e-41 174.1 114 73.7
CiPaw.02G109300 Carya illinoinensis HOM05D005408 ORTHO05D006790 1.8e-41 173.3 115 72.2
Nitab4.5_0000596g0060 Nicotiana tabacum HOM05D005408 ORTHO05D006790 3.1e-41 172.6 115 73.9
Cc03_g05790 Coffea canephora HOM05D005408 ORTHO05D006790 5.3e-41 171.8 115 73.9
Actinidia20821 Actinidia chinensis HOM05D005408 ORTHO05D006790 9.0e-41 171.0 114 71.9
Duzib151G0888 Durio zibethinus HOM05D005408 ORTHO05D006790 1.5e-40 170.2 115 72.2
Dinv27073 Davidia involucrata HOM05D005408 ORTHO05D006790 2.0e-40 169.9 115 72.2
DCAR_024278 Daucus carota HOM05D005408 ORTHO05D006790 2.6e-40 169.5 115 70.4
CSS0016984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 7.6e-40 167.9 115 70.4
CSS0047984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 7.6e-40 167.9 115 70.4
Prupe.1G042300 Prunus persica HOM05D005408 ORTHO05D006790 7.6e-40 167.9 115 70.4
Duzib212G0761 Durio zibethinus HOM05D005408 ORTHO05D006790 1.3e-39 167.2 157 58.0
Atru.chr4.2004 Acer truncatum HOM05D005408 ORTHO05D006790 1.7e-39 166.8 115 69.6
MD16G1222000 Malus domestica HOM05D005408 ORTHO05D006790 2.2e-39 166.4 115 66.1
Oeu002940.1 Olea europaea HOM05D005408 ORTHO05D006790 3.8e-39 165.6 115 72.2
Rhsim02G0041600 Rhododendron simsii HOM05D005408 ORTHO05D006790 3.8e-39 165.6 115 69.6
RcHm_v2.0_Chr4g0394291 Rosa chinensis HOM05D005408 ORTHO05D006790 3.8e-39 165.6 115 70.4
Thecc.04G259100 Theobroma cacao HOM05D005408 ORTHO05D006790 3.8e-39 165.6 115 70.4
FvH4_4g04020 Fragaria vesca HOM05D005408 ORTHO05D006790 6.5e-39 164.9 115 69.6
FAN12G0827 Fragaria x ananassa HOM05D005408 ORTHO05D006790 6.5e-39 164.9 115 69.6
Hma1.2p1_0112F.1_g054305 Hydrangea macrophylla HOM05D005408 ORTHO05D006790 1.1e-38 164.1 115 68.7
MD13G1216600 Malus domestica HOM05D005408 ORTHO05D006790 1.1e-38 164.1 115 66.1
QL06p019224 Quercus lobata HOM05D005408 ORTHO05D006790 1.1e-38 164.1 115 67.8
CiPaw.01G181400 Carya illinoinensis HOM05D005408 ORTHO05D006790 1.4e-38 163.7 115 66.1
Oeu005084.1 Olea europaea HOM05D005408 ORTHO05D006790 1.4e-38 163.7 115 73.0
AUR62002164 Chenopodium quinoa HOM05D005408 ORTHO05D006790 1.9e-38 163.3 114 70.2
AUR62015544 Chenopodium quinoa HOM05D005408 ORTHO05D006790 1.9e-38 163.3 114 70.2
Cfa014743 Carpinus fangiana HOM05D005408 ORTHO05D006790 2.5e-38 162.9 115 67.0
CANSAT54G2691 Cannabis sativa HOM05D005408 ORTHO05D006790 4.2e-38 162.2 116 66.4
Manes.15G043300 Manihot esculenta HOM05D005408 ORTHO05D006790 5.5e-38 161.8 115 67.8
Potri.008G169200 Populus trichocarpa HOM05D005408 ORTHO05D006790 9.3e-38 161.0 155 55.5
vmacro15459 Vaccinium macrocarpon HOM05D005408 ORTHO05D006790 9.3e-38 161.0 115 68.7
EL10Ac3g04981 Beta vulgaris HOM05D005408 ORTHO05D006790 1.2e-37 160.6 115 67.8
COL.COLO4_15917 Corchorus olitorius HOM05D005408 ORTHO05D006790 1.2e-37 160.6 115 67.0
Dinv29839 Davidia involucrata HOM05D005408 ORTHO05D006790 1.6e-37 160.2 115 66.1
FAN22G0039 Fragaria x ananassa HOM05D005408 ORTHO05D006790 1.6e-37 160.2 148 55.4
Gohir.D02G046500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 1.6e-37 160.2 115 66.1
Gorai.005G051300 Gossypium raimondii HOM05D005408 ORTHO05D006790 1.6e-37 160.2 115 66.1
TAR362G0279 Trochodendron aralioides HOM05D005408 ORTHO05D006790 1.6e-37 160.2 115 67.0
FAN17G2537 Fragaria x ananassa HOM05D005408 ORTHO05D006790 2.7e-37 159.5 115 67.8
Gohir.A02G040500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 2.7e-37 159.5 115 66.1
Potri.010G069200 Populus trichocarpa HOM05D005408 ORTHO05D006790 2.7e-37 159.5 155 56.1
Haze_11418 Corylus avellana HOM05D005408 ORTHO05D006790 3.5e-37 159.1 115 65.2
MSTRG.4147 Avicennia marina HOM05D005408 ORTHO05D006790 4.6e-37 158.7 118 71.2
TPR.G25189 Trifolium pratense HOM05D005408 ORTHO05D006790 4.6e-37 158.7 115 67.0
Cpa.g.sc44.32 Carica papaya HOM05D005408 ORTHO05D006790 7.9e-37 157.9 114 68.4
TWI09G0385 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 1.0e-36 157.5 155 54.2
Manes.15G043200 Manihot esculenta HOM05D005408 ORTHO05D006790 2.3e-36 156.4 115 64.3
SGA_v2.0_scaffold101G29731 Striga asiatica HOM05D005408 ORTHO05D006790 2.3e-36 156.4 170 52.9
Psat6g104520 Pisum sativum HOM05D005408 ORTHO05D006790 3.9e-36 155.6 115 66.1
Sabra10G0037900 Salix brachista HOM05D005408 ORTHO05D006790 3.9e-36 155.6 155 54.8
Ciclev10004264m.g Citrus clementina HOM05D005408 ORTHO05D006790 6.7e-36 154.8 115 65.2
Aa31LG9G3050 Aethionema arabicum HOM05D005408 ORTHO05D006790 1.9e-35 153.3 116 62.1
Medtr1g041685 Medicago truncatula HOM05D005408 ORTHO05D006790 1.9e-35 153.3 116 64.7
Glyma.02G003800 Glycine max HOM05D005408 ORTHO05D006790 2.5e-35 152.9 115 66.1
TWI53G1583 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 3.3e-35 152.5 155 51.6
Glyma.10G004700 Glycine max HOM05D005408 ORTHO05D006790 4.3e-35 152.1 115 65.2
GSVIVG01027854001 Vitis vinifera HOM05D005408 ORTHO05D006790 5.7e-35 151.8 115 64.3
Sabra08G0129000 Salix brachista HOM05D005408 ORTHO05D006790 9.7e-35 151.0 118 66.1
Sc19g0003230 Simmondsia chinensis HOM05D005408 ORTHO05D006790 9.7e-35 151.0 115 61.7
ECA248G0134 Erigeron canadensis HOM05D005408 ORTHO05D006790 1.3e-34 150.6 116 67.2
Ca_03010_v3 Cicer arietinum L. HOM05D005408 ORTHO05D006790 1.6e-34 150.2 116 65.5
TAR633G1608 Trochodendron aralioides HOM05D005408 ORTHO05D006790 1.6e-34 150.2 115 62.6
arahy.Tifrunner.gnm1.ann1.HQEG75 Arachis hypogaea HOM05D005408 ORTHO05D006790 2.2e-34 149.8 115 61.7
Sed0026902 Sechium edule HOM05D005408 ORTHO05D006790 2.8e-34 149.4 115 62.6
SGA_v2.0_scaffold43G16217 Striga asiatica HOM05D005408 ORTHO05D006790 2.8e-34 149.4 117 67.5
Phvul.007G275400 Phaseolus vulgaris HOM05D005408 ORTHO05D006790 3.7e-34 149.1 115 64.3
ClCG05G004200 Citrullus lanatus HOM05D005408 ORTHO05D006790 4.8e-34 148.7 116 62.9
arahy.Tifrunner.gnm1.ann1.NA4LRU Arachis hypogaea HOM05D005408 ORTHO05D006790 1.1e-33 147.5 115 60.9
MELO3C006406.2 Cucumis melo HOM05D005408 ORTHO05D006790 1.1e-33 147.5 116 62.9
CsaV3_3G011930 Cucumis sativus L. HOM05D005408 ORTHO05D006790 1.1e-33 147.5 116 62.9
Nn1g02867 Nelumbo nucifera HOM05D005408 ORTHO05D006790 1.4e-33 147.1 115 60.0
Hund03055 Selenicereus undatus HOM05D005408 ORTHO05D006790 1.4e-33 147.1 155 50.3
AT4G14310 Arabidopsis thaliana HOM05D005408 ORTHO05D006790 1.8e-33 146.7 117 59.8
CARHR220500 Cardamine hirsuta HOM05D005408 ORTHO05D006790 1.8e-33 146.7 120 60.0
HanXRQChr11g0330791 Helianthus annuus HOM05D005408 ORTHO05D006790 1.8e-33 146.7 116 62.1
Sp7g12340 Schrenkiella parvula HOM05D005408 ORTHO05D006790 4.1e-33 145.6 119 58.8
Lj6g0021221 Lotus japonicus HOM05D005408 ORTHO05D006790 5.3e-33 145.2 116 62.1
Eucgr.H03018 Eucalyptus grandis HOM05D005408 ORTHO05D006790 6.9e-33 144.8 115 60.0
Migut.G00502 Erythranthe guttata HOM05D005408 ORTHO05D006790 9.0e-33 144.4 169 49.1
Aqoxy5G00183 Aquilegia oxysepala HOM05D005408 ORTHO05D006790 1.2e-32 144.1 115 60.0
Thhalv10024359m.g Eutrema salsugineum HOM05D005408 ORTHO05D006790 1.2e-32 144.1 120 60.0
HanXRQChr01g0023201 Helianthus annuus HOM05D005408 ORTHO05D006790 1.2e-32 144.1 169 49.1
Carub.0007s2798 Capsella rubella HOM05D005408 ORTHO05D006790 1.5e-32 143.7 117 58.1
AL7G41950 Arabidopsis lyrata HOM05D005408 ORTHO05D006790 2.0e-32 143.3 117 58.1
VMungo0720G1073 Vigna mungo HOM05D005408 ORTHO05D006790 2.0e-32 143.3 115 61.7
THA.LOC104822240 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 7.7e-32 141.4 117 59.8
Lalb_Chr03g0037341 Lupinus albus HOM05D005408 ORTHO05D006790 1.7e-31 140.2 116 59.5
BcaNung06103 Brassica carinata HOM05D005408 ORTHO05D006790 5.0e-31 138.7 117 58.1
A08p24350 Brassica napus HOM05D005408 ORTHO05D006790 1.1e-30 137.5 116 57.8
C03p76860 Brassica napus HOM05D005408 ORTHO05D006790 1.1e-30 137.5 116 57.8
BraA08t34390Z Brassica rapa HOM05D005408 ORTHO05D006790 1.1e-30 137.5 116 57.8
BcaC01g00205 Brassica carinata HOM05D005408 ORTHO05D006790 5.5e-30 135.2 116 56.9
BolC3t19941H Brassica oleracea HOM05D005408 ORTHO05D006790 5.5e-30 135.2 116 56.9
PSO210G0343 Papaver somniferum HOM05D005408 ORTHO05D006790 7.9e-29 131.3 119 58.8
MBI07_g31083_MAGBIO Magnolia biondii HOM05D005408 ORTHO05D006790 1.0e-28 131.0 115 56.5
THA.LOC104804761 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 2.3e-28 129.8 117 56.4
Lj3A679T38 Lonicera japonica HOM05D005408 ORTHO05D006790 3.9e-28 129.0 115 61.7
Lj3A684T25 Lonicera japonica HOM05D005408 ORTHO05D006790 8.8e-28 127.9 115 60.9
PSO832G1937 Papaver somniferum HOM05D005408 ORTHO05D006790 8.8e-28 127.9 119 56.3
Lsat_1_v5_gn_1_74661 Lactuca sativa HOM05D005408 ORTHO05D006790 1.5e-27 127.1 165 48.5
PGR004G2334 Punica granatum HOM05D005408 ORTHO05D006790 2.0e-27 126.7 116 55.2
ATR0736G089 Amborella trichopoda HOM05D005408 ORTHO05D006790 4.1e-25 119.0 115 54.8
TPR.G25191 Trifolium pratense HOM05D005408 ORTHO05D006790 2.6e-24 116.3 119 53.8
Zm00001eb191660 Zea mays HOM05D005408 ORTHO05D006790 2.6e-24 116.3 115 50.4
Os02g0809900 Oryza sativa ssp. japonica HOM05D005408 ORTHO05D006790 3.4e-24 115.9 115 49.6
Zm00001eb258510 Zea mays HOM05D005408 ORTHO05D006790 3.8e-23 112.5 115 48.7
CDE07G1006 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 1.1e-22 110.9 128 51.6
HPP92_008326 Vanilla planifolia HOM05D005408 ORTHO05D006790 1.4e-22 110.5 114 48.2
CDE04G2551 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 3.2e-22 109.4 121 53.7
SEGI_14734 Sequoiadendron giganteum HOM05D005408 ORTHO05D006790 3.0e-20 102.8 117 44.4
unitig_736.g22443 Utricularia gibba HOM05D005408 ORTHO05D006790 2.6e-16 89.7 113 48.7
Pp3c16_10130 Physcomitrium patens HOM05D005408 ORTHO05D006790 8.0e-13 78.2 113 36.3
Pp3c25_7300 Physcomitrium patens HOM05D005408 ORTHO05D006790 1.0e-12 77.8 120 34.2
Rhsim02G0041700 Rhododendron simsii HOM05D005408 ORTHO05D006790 4.4e-11 72.4 57 64.9
Mapoly0063s0094 Marchantia polymorpha HOM05D005408 ORTHO05D006790 5.7e-11 72.0 140 32.9
A04p07780 Brassica napus HOM05D005408 ORTHO05D006790 2.2e-10 70.1 81 51.9
SalBow5G1027 Salvia bowleyana HOM05D003338 ORTHO05D004042 4.2e-06 55.8 40 75.0
SalBow5G2265 Salvia bowleyana HOM05D003338 ORTHO05D004042 4.2e-06 55.8 40 75.0
Dinv13598 Davidia involucrata HOM05D003338 ORTHO05D004042 5.5e-06 55.5 35 74.3
Oeu002143.1 Olea europaea HOM05D003338 ORTHO05D004042 5.5e-06 55.5 31 87.1
ECA238G0630 Erigeron canadensis HOM05D003338 ORTHO05D004042 7.2e-06 55.1 35 74.3
Hund11908 Selenicereus undatus HOM05D005408 ORTHO05D006790 9.4e-06 54.7 61 47.5


User provided reference genes

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