Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4769 Salvia bowleyana HOM05D004908 ORTHO05D006418 3.9e-196 688.0 347 100.0
SalBow7G0217 Salvia bowleyana HOM05D004908 ORTHO05D006418 3.2e-110 402.5 350 65.7
SalBow7G4422 Salvia bowleyana HOM05D004908 ORTHO05D006418 2.0e-104 383.3 351 63.5
SalBow7G1843 Salvia bowleyana HOM05D004908 ORTHO05D006418 2.0e-91 340.1 359 59.1
MSTRG.9592 Avicennia marina HOM05D004908 ORTHO05D006418 3.8e-58 229.6 364 44.8
SGA_v2.0_scaffold51G18774 Striga asiatica HOM05D004908 ORTHO05D006418 4.8e-53 212.6 371 40.7
Migut.D01626 Erythranthe guttata HOM05D004908 ORTHO05D006418 1.6e-45 187.6 344 42.7
Oeu032097.2 Olea europaea HOM05D004908 ORTHO05D006418 1.1e-44 184.9 381 38.8
Cfa019355 Carpinus fangiana HOM05D004908 ORTHO05D006418 4.6e-40 169.5 335 40.0
Prupe.5G207300 Prunus persica HOM05D004908 ORTHO05D006418 1.5e-38 164.5 308 40.9
Sopen12g018880 Solanum pennellii HOM05D004908 ORTHO05D006418 3.3e-38 163.3 316 38.0
Hma1.2p1_0060F.1_g032940 Hydrangea macrophylla HOM05D004908 ORTHO05D006418 4.3e-38 162.9 334 39.8
Haze_07746 Corylus avellana HOM05D004908 ORTHO05D006418 5.7e-38 162.5 358 37.2
Cc00_g03370 Coffea canephora HOM05D004908 ORTHO05D006418 1.3e-37 161.4 235 44.7
Lsat_1_v5_gn_5_22901 Lactuca sativa HOM05D004908 ORTHO05D006418 2.8e-37 160.2 346 37.3
CSS0022679 Camellia sinensis var. sinensis HOM05D004908 ORTHO05D006418 3.7e-37 159.8 351 37.3
THA.LOC104808039 Tarenaya hassleriana HOM05D004908 ORTHO05D006418 4.8e-37 159.5 329 37.1
Dinv17436 Davidia involucrata HOM05D004908 ORTHO05D006418 1.1e-36 158.3 363 36.6
CsaV3_1G006120 Cucumis sativus L. HOM05D004908 ORTHO05D006418 1.2e-35 154.8 293 39.2
Atru.chr9.517 Acer truncatum HOM05D004908 ORTHO05D006418 2.6e-35 153.7 311 38.9
Manes.14G087300 Manihot esculenta HOM05D004908 ORTHO05D006418 2.6e-35 153.7 299 39.8
Thecc.03G001900 Theobroma cacao HOM05D004908 ORTHO05D006418 3.4e-35 153.3 355 37.7
Lj9C439G11 Lonicera japonica HOM05D004908 ORTHO05D006418 4.5e-35 152.9 242 42.6
Peaxi162Scf01223g00009 Petunia axillaris HOM05D004908 ORTHO05D006418 4.5e-35 152.9 296 38.5
Duzib068G0428 Durio zibethinus HOM05D004908 ORTHO05D006418 5.8e-35 152.5 359 36.2
TWI81G0201 Tripterygium wilfordii HOM05D004908 ORTHO05D006418 5.8e-35 152.5 309 38.5
AL1G31040 Arabidopsis lyrata HOM05D004908 ORTHO05D006418 7.6e-35 152.1 334 36.5
AT1G18600 Arabidopsis thaliana HOM05D004908 ORTHO05D006418 1.0e-34 151.8 330 37.6
CiPaw.12G009100 Carya illinoinensis HOM05D004908 ORTHO05D006418 1.0e-34 151.8 331 37.5
HanXRQChr05g0153521 Helianthus annuus HOM05D004908 ORTHO05D006418 1.0e-34 151.8 225 44.9
Eucgr.B00624 Eucalyptus grandis HOM05D004908 ORTHO05D006418 1.3e-34 151.4 318 39.0
Glyma.05G019500 Glycine max HOM05D004908 ORTHO05D006418 1.3e-34 151.4 283 38.2
GSVIVG01008119001 Vitis vinifera HOM05D004908 ORTHO05D006418 1.3e-34 151.4 358 36.3
QL10p019966 Quercus lobata HOM05D004908 ORTHO05D006418 1.7e-34 151.0 350 38.0
MD14G1214000 Malus domestica HOM05D004908 ORTHO05D006418 2.2e-34 150.6 229 43.7
Sabra06G0175900 Salix brachista HOM05D004908 ORTHO05D006418 3.8e-34 149.8 354 33.9
ECA246G3883 Erigeron canadensis HOM05D004908 ORTHO05D006418 5.0e-34 149.4 274 39.8
Gohir.A12G276800 Gossypium hirsutum HOM05D004908 ORTHO05D006418 5.0e-34 149.4 348 36.8
Gorai.008G298500 Gossypium raimondii HOM05D004908 ORTHO05D006418 5.0e-34 149.4 345 36.8
Lalb_Chr07g0178341 Lupinus albus HOM05D004908 ORTHO05D006418 6.5e-34 149.1 278 39.6
Carub.0001s1823 Capsella rubella HOM05D004908 ORTHO05D006418 8.4e-34 148.7 282 39.7
Gohir.D12G277800 Gossypium hirsutum HOM05D004908 ORTHO05D006418 8.4e-34 148.7 237 42.2
Phvul.003G183300 Phaseolus vulgaris HOM05D004908 ORTHO05D006418 8.4e-34 148.7 337 35.6
Potri.006G227300 Populus trichocarpa HOM05D004908 ORTHO05D006418 1.1e-33 148.3 251 39.4
Lj4g0028183 Lotus japonicus HOM05D004908 ORTHO05D006418 1.4e-33 147.9 271 39.1
arahy.Tifrunner.gnm1.ann1.J6BFMQ Arachis hypogaea HOM05D004908 ORTHO05D006418 2.5e-33 147.1 313 38.0
arahy.Tifrunner.gnm1.ann1.PAN20U Arachis hypogaea HOM05D004908 ORTHO05D006418 2.5e-33 147.1 313 38.0
ClCG04G011680 Citrullus lanatus HOM05D004908 ORTHO05D006418 2.5e-33 147.1 290 37.6
Medtr4g109700 Medicago truncatula HOM05D004908 ORTHO05D006418 3.2e-33 146.7 314 36.6
BolC5t30387H Brassica oleracea HOM05D004908 ORTHO05D006418 4.2e-33 146.4 324 37.3
Thhalv10008142m.g Eutrema salsugineum HOM05D004908 ORTHO05D006418 9.3e-33 145.2 218 45.0
CARHR019220 Cardamine hirsuta HOM05D004908 ORTHO05D006418 1.6e-32 144.4 353 36.3
Hund02570 Selenicereus undatus HOM05D004908 ORTHO05D006418 1.6e-32 144.4 353 34.8
Sp1g16570 Schrenkiella parvula HOM05D004908 ORTHO05D006418 2.1e-32 144.1 241 42.3
BcaC05g25755 Brassica carinata HOM05D004908 ORTHO05D006418 2.7e-32 143.7 218 44.5
C05p16860 Brassica napus HOM05D004908 ORTHO05D006418 2.7e-32 143.7 218 44.5
Sed0013495 Sechium edule HOM05D004908 ORTHO05D006418 7.9e-32 142.1 226 42.5
Cpa.g.sc94.75 Carica papaya HOM05D004908 ORTHO05D006418 1.0e-31 141.7 248 41.1
FvH4_5g13640 Fragaria vesca HOM05D004908 ORTHO05D006418 1.0e-31 141.7 228 43.0
BcaB07g31879 Brassica carinata HOM05D004908 ORTHO05D006418 1.8e-31 141.0 357 35.6
RcHm_v2.0_Chr7g0183321 Rosa chinensis HOM05D004908 ORTHO05D006418 1.8e-31 141.0 228 42.5
TPR.G1983 Trifolium pratense HOM05D004908 ORTHO05D006418 1.8e-31 141.0 237 42.6
A06p14680 Brassica napus HOM05D004908 ORTHO05D006418 2.3e-31 140.6 218 44.0
BraA06t24593Z Brassica rapa HOM05D004908 ORTHO05D006418 2.3e-31 140.6 218 44.0
Ciclev10021158m.g Citrus clementina HOM05D004908 ORTHO05D006418 2.3e-31 140.6 279 40.1
Prupe.5G207200 Prunus persica HOM05D004908 ORTHO05D006418 3.0e-31 140.2 295 37.3
Nitab4.5_0001797g0080 Nicotiana tabacum HOM05D004908 ORTHO05D006418 3.9e-31 139.8 335 32.8
unitig_699.g19027 Utricularia gibba HOM05D004908 ORTHO05D006418 5.1e-31 139.4 245 40.0
VMungo1215G2693 Vigna mungo HOM05D004908 ORTHO05D006418 6.7e-31 139.0 326 34.0
Nitab4.5_0006506g0020 Nicotiana tabacum HOM05D004908 ORTHO05D006418 8.7e-31 138.7 227 39.6
MELO3C002041.2 Cucumis melo HOM05D004908 ORTHO05D006418 1.1e-30 138.3 241 42.3
CANSAT80G1354 Cannabis sativa HOM05D004908 ORTHO05D006418 1.9e-30 137.5 335 34.9
DCAR_011562 Daucus carota HOM05D004908 ORTHO05D006418 3.3e-30 136.7 227 42.7
AUR62039652 Chenopodium quinoa HOM05D004908 ORTHO05D006418 1.3e-29 134.8 325 36.3
Manes.14G087101 Manihot esculenta HOM05D004908 ORTHO05D006418 1.6e-29 134.4 251 37.5
Ah.11g047620 Amaranthus hybridus HOM05D004908 ORTHO05D006418 2.2e-29 134.0 334 34.1
TAR371G0785 Trochodendron aralioides HOM05D004908 ORTHO05D006418 6.3e-29 132.5 219 42.5
Aa31LG7G3360 Aethionema arabicum HOM05D004908 ORTHO05D006418 8.2e-29 132.1 217 43.3
PGR083G2541 Punica granatum HOM05D004908 ORTHO05D006418 1.1e-28 131.7 317 34.1
Duzib205G0531 Durio zibethinus HOM05D004908 ORTHO05D006418 1.8e-28 131.0 225 41.8
MBI16_g10851_MAGBIO Magnolia biondii HOM05D004908 ORTHO05D006418 2.4e-28 130.6 231 39.8
Aqoxy3G03654 Aquilegia oxysepala HOM05D004908 ORTHO05D006418 3.4e-27 126.7 210 41.4
PSO017G6704 Papaver somniferum HOM05D004908 ORTHO05D006418 3.4e-27 126.7 211 42.2
PSO017G5063 Papaver somniferum HOM05D004908 ORTHO05D006418 4.5e-27 126.3 211 41.7
AUR62021531 Chenopodium quinoa HOM05D004908 ORTHO05D006418 5.9e-27 125.9 339 34.8
Nn4g23471 Nelumbo nucifera HOM05D004908 ORTHO05D006418 7.7e-27 125.6 334 34.4
Rhsim08G0143800 Rhododendron simsii HOM05D004908 ORTHO05D006418 1.3e-26 124.8 395 30.6
PSO478G4625 Papaver somniferum HOM05D004908 ORTHO05D006418 1.7e-26 124.4 202 40.6
FAN13G1644 Fragaria x ananassa HOM05D004908 ORTHO05D006418 8.5e-26 122.1 218 39.4
HPP92_019201 Vanilla planifolia HOM05D004908 ORTHO05D006418 1.4e-25 121.3 260 34.2
EL10Ac5g11159 Beta vulgaris HOM05D004908 ORTHO05D006418 4.2e-25 119.8 211 38.9
CDE07G0469 Ceratophyllum demersum HOM05D004908 ORTHO05D006418 5.5e-25 119.4 227 38.3
SHI17490 Sapria himalayana HOM05D004908 ORTHO05D006418 5.5e-25 119.4 218 40.8
FAN13G3071 Fragaria x ananassa HOM05D004908 ORTHO05D006418 7.2e-25 119.0 292 35.6
FAN08G0411 Fragaria x ananassa HOM05D004908 ORTHO05D006418 9.4e-25 118.6 269 36.1
Os01g0763100 Oryza sativa ssp. japonica HOM05D004908 ORTHO05D006418 1.0e-23 115.2 214 37.9
Psat0s3566g0040 Pisum sativum HOM05D004908 ORTHO05D006418 1.4e-23 114.8 123 51.2
Pp3c22_7870 Physcomitrium patens HOM05D004908 ORTHO05D006418 3.0e-23 113.6 217 39.6
FAN18G1888 Fragaria x ananassa HOM05D004908 ORTHO05D006418 5.1e-23 112.8 221 36.7
AagrBONN_evm.TU.Sc2ySwM_368.1628 Anthoceros agrestis HOM05D004908 ORTHO05D006418 4.3e-22 109.8 231 36.4
ATR0827G189 Amborella trichopoda HOM05D004908 ORTHO05D006418 5.7e-22 109.4 210 40.5
AT1G74130 Arabidopsis thaliana HOM05D004908 ORTHO05D006418 1.1e-20 105.1 210 36.2
PSO017G2617 Papaver somniferum HOM05D004908 ORTHO05D006418 4.1e-20 103.2 150 48.0
Zm00001eb370410 Zea mays HOM05D004908 ORTHO05D006418 1.5e-19 101.3 206 38.8
FvH4_5g13620 Fragaria vesca HOM05D004908 ORTHO05D006418 5.9e-19 99.4 167 38.9
Thhalv10019561m.g Eutrema salsugineum HOM05D004908 ORTHO05D006418 1.0e-18 98.6 204 37.3
RcHm_v2.0_Chr7g0183341 Rosa chinensis HOM05D004908 ORTHO05D006418 1.3e-18 98.2 116 46.6
Mapoly0086s0048 Marchantia polymorpha HOM05D004908 ORTHO05D006418 1.7e-18 97.8 216 35.2
AL2G34040 Arabidopsis lyrata HOM05D004908 ORTHO05D006418 5.0e-18 96.3 220 34.5
vmacro17623 Vaccinium macrocarpon HOM05D004908 ORTHO05D006418 1.1e-17 95.1 89 57.3
vmacro17622 Vaccinium macrocarpon HOM05D004908 ORTHO05D006418 5.5e-17 92.8 229 34.9
MCO07G692 Micromonas commoda HOM05D004908 ORTHO05D006418 7.2e-17 92.4 223 32.3
Carub.0002s2095 Capsella rubella HOM05D004908 ORTHO05D006418 9.4e-17 92.0 215 34.4
Carub.0002s2094 Capsella rubella HOM05D004908 ORTHO05D006418 1.2e-16 91.7 217 34.1
CARHR067290 Cardamine hirsuta HOM05D004908 ORTHO05D006418 1.2e-16 91.7 308 28.6
AT1G74140 Arabidopsis thaliana HOM05D004908 ORTHO05D006418 7.9e-16 89.0 183 35.0
HPP92_019191 Vanilla planifolia HOM05D004908 ORTHO05D006418 7.9e-16 89.0 140 38.6
A07p40020 Brassica napus HOM05D003320 ORTHO05D003941 1.8e-15 87.8 197 33.0
BraA07t31547Z Brassica rapa HOM05D003320 ORTHO05D003941 1.8e-15 87.8 197 33.5
Solyc12g038590.2 Solanum lycopersicum HOM05D004908 ORTHO05D006418 3.0e-15 87.0 174 36.8
BcaC08g46817 Brassica carinata HOM05D004908 ORTHO05D006418 3.9e-15 86.7 224 30.8
SEGI_05482 Sequoiadendron giganteum HOM05D004908 ORTHO05D006418 3.9e-15 86.7 141 43.3
Solyc12g038600.2 Solanum lycopersicum HOM05D004908 ORTHO05D006418 3.9e-15 86.7 155 37.4
RcHm_v2.0_Chr6g0258631 Rosa chinensis HOM05D004908 ORTHO05D006418 8.8e-15 85.5 101 49.5
Sc04g0004310 Simmondsia chinensis HOM05D004908 ORTHO05D006418 2.6e-14 84.0 339 29.2
FAN08G1663 Fragaria x ananassa HOM05D004908 ORTHO05D006418 3.3e-14 83.6 228 33.3
Gohir.A06G087200 Gossypium hirsutum HOM05D004908 ORTHO05D006418 5.7e-14 82.8 74 54.1
Actinidia04812 Actinidia chinensis HOM05D004908 ORTHO05D006418 9.7e-14 82.0 211 34.6
FAN13G1921 Fragaria x ananassa HOM05D004908 ORTHO05D006418 1.3e-13 81.6 228 32.9
C06p48280 Brassica napus HOM05D004908 ORTHO05D006418 3.7e-13 80.1 140 37.9
BolC6t39860H Brassica oleracea HOM05D004908 ORTHO05D006418 6.3e-13 79.3 137 38.7
BcaC08g46813 Brassica carinata HOM05D004908 ORTHO05D006418 1.4e-12 78.2 136 37.5
RcHm_v2.0_Chr1g0346931 Rosa chinensis HOM05D004908 ORTHO05D006418 4.1e-12 76.6 158 39.2
Gohir.D10G255500 Gossypium hirsutum HOM05D004908 ORTHO05D006418 5.3e-12 76.3 148 39.2
Prupe.3G124800 Prunus persica HOM05D004908 ORTHO05D006418 2.0e-11 74.3 336 29.2
C06p48290 Brassica napus HOM05D003320 ORTHO05D003941 3.2e-09 67.0 101 39.6
CBR_g24070 Chara braunii HOM05D000019 ORTHO05D000002 2.7e-08 63.9 120 30.8
Actinidia13428 Actinidia chinensis HOM05D004908 ORTHO05D006418 4.7e-08 63.2 98 43.9


User provided reference genes

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