Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4673 Salvia bowleyana HOM05D015686 ORTHO05D009801 2.0e-272 941.8 478 100.0
SalBow3G2730 Salvia bowleyana HOM05D015686 ORTHO05D009801 1.0e-186 657.1 402 86.1
SalBow4G1019 Salvia bowleyana HOM05D015686 ORTHO05D009801 8.7e-98 361.7 221 84.6
SalBow1G6070 Salvia bowleyana HOM05D015686 ORTHO05D009801 1.5e-60 238.0 208 58.7
SalBow1G4863 Salvia bowleyana HOM05D015686 ORTHO05D009801 2.5e-60 237.3 258 52.3
SalBow1G2440 Salvia bowleyana HOM05D015686 ORTHO05D009801 8.9e-50 202.2 162 61.7
SalBow1G6471 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.0e-42 178.7 267 37.8
SalBow5G0931 Salvia bowleyana HOM05D008275 ORTHO05D009801 4.4e-41 173.3 261 36.4
SalBow6G1072 Salvia bowleyana HOM05D015686 ORTHO05D009801 7.5e-41 172.6 151 58.3
SalBow1G7249 Salvia bowleyana HOM05D008275 ORTHO05D009801 9.8e-41 172.2 266 35.7
SalBow8G3441 Salvia bowleyana HOM05D008275 ORTHO05D009801 4.9e-40 169.9 266 35.3
SalBow7G2090 Salvia bowleyana HOM05D015686 ORTHO05D009801 6.4e-40 169.5 141 66.0
SalBow1G2281 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.4e-34 151.8 235 36.2
SalBow8G1268 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.3e-29 135.2 256 32.0
SalBow5G1427 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.5e-28 131.7 383 27.9
SalBow4G2611 Salvia bowleyana HOM05D008275 ORTHO05D009801 9.5e-28 129.0 247 28.7
SalBow7G4369 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.2e-27 128.6 257 31.5
SalBow6G1118 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.6e-27 128.3 224 32.1
SalBow5G1534 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.2e-25 122.1 211 33.2
SalBow6G0143 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.5e-25 121.7 271 31.7
SalBow4G2887 Salvia bowleyana HOM05D015686 ORTHO05D009801 1.4e-23 115.2 101 53.5
SalBow1G7213 Salvia bowleyana HOM05D008275 ORTHO05D009801 3.5e-22 110.5 268 27.2
SGA_v2.0_scaffold309G48185 Striga asiatica HOM05D002069 ORTHO05D002997 7.8e-22 109.4 253 29.6
SalBow1G6672 Salvia bowleyana HOM05D008275 ORTHO05D009801 5.1e-21 106.7 167 34.7
SalBow5G4397 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.9e-20 104.8 152 34.9
SalBow6G1837 Salvia bowleyana HOM05D008275 ORTHO05D009801 2.5e-20 104.4 158 33.5
SalBow6G0904 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.4e-18 98.6 269 28.6
SalBow1G3428 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.5e-17 95.1 119 39.5
SalBow6G6378 Salvia bowleyana HOM05D008275 ORTHO05D009801 4.4e-17 93.6 130 38.5
SalBow6G1141 Salvia bowleyana HOM05D008275 ORTHO05D009801 9.9e-17 92.4 157 29.3
SalBow1G0223 Salvia bowleyana HOM05D008275 ORTHO05D009801 2.9e-16 90.9 157 28.0
SalBow6G2500 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.1e-15 89.0 188 28.7
SalBow5G1387 Salvia bowleyana HOM05D008275 ORTHO05D009801 4.2e-15 87.0 104 40.4
SGA_v2.0_scaffold180G39665 Striga asiatica HOM05D002069 ORTHO05D002997 1.2e-14 85.5 286 27.3
SalBow8G3225 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.6e-14 85.1 87 42.5
SalBow2G1998 Salvia bowleyana HOM05D008275 ORTHO05D009801 3.5e-14 84.0 87 41.4
DCAR_031481 Daucus carota HOM05D002069 ORTHO05D001421 3.0e-13 80.9 240 29.2
SalBow7G3087 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.1e-12 79.0 118 30.5
SalBow7G3170 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.5e-12 78.6 87 39.1
SGA_v2.0_scaffold231G43467 Striga asiatica HOM05D024144 ORTHO05D009801 1.5e-12 78.6 217 25.8
DCAR_014911 Daucus carota HOM05D002069 ORTHO05D001421 4.3e-12 77.0 258 26.0
DCAR_029821 Daucus carota HOM05D002069 ORTHO05D001421 4.3e-12 77.0 258 26.0
DCAR_031319 Daucus carota HOM05D008184 ORTHO05D002997 4.3e-12 77.0 249 25.3
ECA233G2044 Erigeron canadensis HOM05D002069 ORTHO05D001421 7.3e-12 76.3 407 22.9
DCAR_005112 Daucus carota HOM05D008184 ORTHO05D001421 2.1e-11 74.7 249 24.9
SalBow2G1904 Salvia bowleyana HOM05D008275 ORTHO05D009801 2.8e-11 74.3 103 35.0
DCAR_025060 Daucus carota HOM05D008184 ORTHO05D002997 4.8e-11 73.6 256 23.0
Lsat_1_v5_gn_9_119901 Lactuca sativa HOM05D002069 ORTHO05D001421 6.2e-11 73.2 263 27.8
DCAR_011112 Daucus carota HOM05D008184 ORTHO05D001421 8.1e-11 72.8 257 24.9
SalBow1G6199 Salvia bowleyana HOM05D008275 ORTHO05D009801 8.1e-11 72.8 79 38.0
SalBow7G3928 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.4e-10 72.0 66 48.5
DCAR_001085 Daucus carota HOM05D002069 ORTHO05D001421 1.8e-10 71.6 249 24.5
DCAR_017420 Daucus carota HOM05D036185 ORTHO05D001421 2.4e-10 71.2 297 24.6
SalBow8G4774 Salvia bowleyana HOM05D008275 ORTHO05D009801 2.4e-10 71.2 99 33.3
SGA_v2.0_scaffold21G09314 Striga asiatica HOM05D010580 ORTHO05D002997 3.1e-10 70.9 96 36.5
DCAR_024745 Daucus carota HOM05D008184 ORTHO05D002997 4.0e-10 70.5 161 29.2
DCAR_018055 Daucus carota HOM05D002069 ORTHO05D001421 5.3e-10 70.1 252 24.6
DCAR_015559 Daucus carota HOM05D002069 ORTHO05D001421 6.9e-10 69.7 246 25.2
DCAR_005136 Daucus carota HOM05D002069 ORTHO05D001421 9.0e-10 69.3 229 27.1
DCAR_005723 Daucus carota HOM05D002069 ORTHO05D001421 9.0e-10 69.3 229 27.1
DCAR_009831 Daucus carota HOM05D002069 ORTHO05D001421 9.0e-10 69.3 229 27.1
DCAR_032318 Daucus carota HOM05D002069 ORTHO05D001421 9.0e-10 69.3 229 27.1
DCAR_031358 Daucus carota HOM05D002069 ORTHO05D001421 1.2e-09 68.9 229 27.1
ECA246G2341 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.2e-09 68.9 207 25.6
DCAR_017409 Daucus carota HOM05D002069 ORTHO05D001421 4.5e-09 67.0 236 24.2
AUR62038928 Chenopodium quinoa HOM05D008769 ORTHO05D018535 5.8e-09 66.6 215 25.6
DCAR_005230 Daucus carota HOM05D002069 ORTHO05D001421 5.8e-09 66.6 242 26.4
DCAR_018982 Daucus carota HOM05D002069 ORTHO05D001421 5.8e-09 66.6 222 27.0
Lsat_1_v5_gn_5_126901 Lactuca sativa HOM05D002069 ORTHO05D001421 7.6e-09 66.2 274 24.8
SalBow5G3844 Salvia bowleyana HOM05D000523 ORTHO05D002439 7.6e-09 66.2 148 29.7
ECA238G2168 Erigeron canadensis HOM05D002069 ORTHO05D001421 9.9e-09 65.9 227 25.6
AUR62042422 Chenopodium quinoa HOM05D007817 ORTHO05D001421 1.3e-08 65.5 234 24.8
DCAR_029899 Daucus carota HOM05D002069 ORTHO05D001421 1.7e-08 65.1 220 25.9
DCAR_031539 Daucus carota HOM05D002069 ORTHO05D001421 1.7e-08 65.1 257 24.9
DCAR_015033 Daucus carota HOM05D002069 ORTHO05D001421 2.2e-08 64.7 249 22.1
ECA232G4022 Erigeron canadensis HOM05D002069 ORTHO05D001421 2.2e-08 64.7 265 24.9
ECA238G1866 Erigeron canadensis HOM05D001408 ORTHO05D001312 2.2e-08 64.7 230 25.7
SalBow7G1883 Salvia bowleyana HOM05D008275 ORTHO05D009801 2.2e-08 64.7 76 36.8
DCAR_024115 Daucus carota HOM05D010768 ORTHO05D010791 2.9e-08 64.3 256 23.8
ECA238G1870 Erigeron canadensis HOM05D000097 ORTHO05D001421 3.8e-08 63.9 265 24.9
HanXRQChr10g0309881 Helianthus annuus HOM05D002069 ORTHO05D001421 4.9e-08 63.5 234 24.8
Lsat_1_v5_gn_2_65260 Lactuca sativa HOM05D002069 ORTHO05D001421 4.9e-08 63.5 239 24.3
Lsat_1_v5_gn_4_27020 Lactuca sativa HOM05D002069 ORTHO05D001421 4.9e-08 63.5 239 24.3
Lsat_1_v5_gn_8_18440 Lactuca sativa HOM05D002069 ORTHO05D001421 4.9e-08 63.5 239 24.3
Lsat_1_v5_gn_9_109960 Lactuca sativa HOM05D002069 ORTHO05D001421 4.9e-08 63.5 239 24.3
DCAR_017193 Daucus carota HOM05D002069 ORTHO05D001421 6.4e-08 63.2 246 25.2
ECA234G1415 Erigeron canadensis HOM05D002069 ORTHO05D001421 8.4e-08 62.8 249 24.5
ECA236G4014 Erigeron canadensis HOM05D002069 ORTHO05D001421 8.4e-08 62.8 224 27.7
HanXRQChr14g0449651 Helianthus annuus HOM05D002069 ORTHO05D001421 8.4e-08 62.8 340 21.8
ECA240G0190 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.1e-07 62.4 224 25.9
ECA246G2312 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.1e-07 62.4 275 21.8
Lsat_1_v5_gn_5_183740 Lactuca sativa HOM05D002069 ORTHO05D001421 1.1e-07 62.4 208 24.0
SalBow5G2111 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.1e-07 62.4 70 38.6
DCAR_017370 Daucus carota HOM05D002069 ORTHO05D001421 1.4e-07 62.0 205 23.9
SalBow8G5120 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.4e-07 62.0 64 42.2
Lsat_1_v5_gn_5_176780 Lactuca sativa HOM05D005502 ORTHO05D001421 1.9e-07 61.6 230 24.3
Lsat_1_v5_gn_6_18960 Lactuca sativa HOM05D005502 ORTHO05D001421 1.9e-07 61.6 230 24.3
HanXRQChr06g0167591 Helianthus annuus HOM05D002069 ORTHO05D001421 2.4e-07 61.2 286 23.8
Lsat_1_v5_gn_4_60840 Lactuca sativa HOM05D005502 ORTHO05D001421 3.2e-07 60.8 220 23.6
SalBow6G4138 Salvia bowleyana HOM05D008275 ORTHO05D009801 3.2e-07 60.8 77 35.1
SalBow6G7057 Salvia bowleyana HOM05D008275 ORTHO05D009801 3.2e-07 60.8 77 35.1
SalBow7G3161 Salvia bowleyana HOM05D008275 ORTHO05D009801 3.2e-07 60.8 122 35.2
DCAR_005068 Daucus carota HOM05D002069 ORTHO05D001421 4.2e-07 60.5 228 24.6
ECA232G2184 Erigeron canadensis HOM05D002069 ORTHO05D001421 4.2e-07 60.5 220 27.3
Lsat_1_v5_gn_5_31860 Lactuca sativa HOM05D002069 ORTHO05D001421 4.2e-07 60.5 211 25.6
SalBow7G2618 Salvia bowleyana HOM05D008275 ORTHO05D009801 4.2e-07 60.5 76 38.2
ECA238G3097 Erigeron canadensis HOM05D002069 ORTHO05D001421 5.4e-07 60.1 226 25.2
ECA247G2702 Erigeron canadensis HOM05D000014 ORTHO05D010592 5.4e-07 60.1 242 24.4
HanXRQChr03g0078461 Helianthus annuus HOM05D002069 ORTHO05D001421 5.4e-07 60.1 165 28.5
Ah.14g082230 Amaranthus hybridus HOM05D006463 ORTHO05D002997 7.1e-07 59.7 229 26.6
Lsat_1_v5_gn_2_135660 Lactuca sativa HOM05D005502 ORTHO05D001421 7.1e-07 59.7 227 22.0
Ah.05g175700 Amaranthus hybridus HOM05D006463 ORTHO05D002997 9.3e-07 59.3 233 27.0
ECA246G2142 Erigeron canadensis HOM05D002069 ORTHO05D001421 9.3e-07 59.3 207 23.7
ECA248G0796 Erigeron canadensis HOM05D000001 ORTHO05D001421 1.2e-06 58.9 204 22.1
Lsat_1_v5_gn_8_34680 Lactuca sativa HOM05D005502 ORTHO05D001421 1.2e-06 58.9 228 21.5
SalBow6G1107 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.2e-06 58.9 76 36.8
ECA234G4655 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.6e-06 58.5 234 22.6
Ah.09g225340 Amaranthus hybridus HOM05D006463 ORTHO05D002997 2.1e-06 58.2 229 26.6
AUR62039344 Chenopodium quinoa HOM05D007817 ORTHO05D001421 2.1e-06 58.2 142 30.3
DCAR_011489 Daucus carota HOM05D002069 ORTHO05D001421 2.1e-06 58.2 222 23.0
Lsat_1_v5_gn_6_93140 Lactuca sativa HOM05D005502 ORTHO05D001421 2.1e-06 58.2 224 24.1
DCAR_001467 Daucus carota HOM05D002069 ORTHO05D001421 2.7e-06 57.8 205 22.9
DCAR_024114 Daucus carota HOM05D002069 ORTHO05D001421 2.7e-06 57.8 205 22.9
ECA233G3341 Erigeron canadensis HOM05D002069 ORTHO05D001421 2.7e-06 57.8 250 25.6
ECA240G4259 Erigeron canadensis HOM05D002069 ORTHO05D001421 2.7e-06 57.8 79 36.7
Lsat_1_v5_gn_5_166541 Lactuca sativa HOM05D005502 ORTHO05D001421 2.7e-06 57.8 228 21.9
Ah.01g009500 Amaranthus hybridus HOM05D006463 ORTHO05D002997 3.5e-06 57.4 229 26.6
Ah.03g145400 Amaranthus hybridus HOM05D006463 ORTHO05D002997 3.5e-06 57.4 229 26.6
ECA240G0553 Erigeron canadensis HOM05D002069 ORTHO05D001421 3.5e-06 57.4 265 23.8
Lsat_1_v5_gn_3_123300 Lactuca sativa HOM05D005502 ORTHO05D001421 3.5e-06 57.4 209 23.4
Lsat_1_v5_gn_4_129501 Lactuca sativa HOM05D005502 ORTHO05D001421 3.5e-06 57.4 317 19.9
ECA233G0231 Erigeron canadensis HOM05D002069 ORTHO05D001421 4.6e-06 57.0 264 23.9
ECA233G0561 Erigeron canadensis HOM05D002069 ORTHO05D001421 4.6e-06 57.0 223 25.1
ECA233G0853 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.6e-06 57.0 227 25.1
Lsat_1_v5_gn_5_151480 Lactuca sativa HOM05D002069 ORTHO05D001421 4.6e-06 57.0 137 28.5
SalBow8G1459 Salvia bowleyana HOM05D008275 ORTHO05D009801 4.6e-06 57.0 89 32.6
SGA_v2.0_scaffold86G26863 Striga asiatica HOM05D024144 ORTHO05D009801 4.6e-06 57.0 229 23.6
SalBow3G0237 Salvia bowleyana HOM05D008275 ORTHO05D009801 6.0e-06 56.6 56 46.4
HanXRQChr08g0223541 Helianthus annuus HOM05D002069 ORTHO05D001421 7.9e-06 56.2 236 22.9


User provided reference genes

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