Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4646 Salvia bowleyana HOM05D006668 ORTHO05D008252 4.9e-208 727.6 385 100.0
SGA_v2.0_scaffold70G23480 Striga asiatica HOM05D006668 ORTHO05D008252 3.2e-74 283.1 418 47.8
SGA_v2.0_scaffold58G20553 Striga asiatica HOM05D006668 ORTHO05D008252 6.6e-72 275.4 407 48.2
MSTRG.5024 Avicennia marina HOM05D006668 ORTHO05D008252 6.4e-67 258.8 440 44.3
Migut.M00152 Erythranthe guttata HOM05D006668 ORTHO05D008252 1.1e-66 258.1 315 50.8
Oeu036086.1 Olea europaea HOM05D006668 ORTHO05D008252 1.0e-64 251.5 423 42.1
Peaxi162Scf00189g00018 Petunia axillaris HOM05D006668 ORTHO05D008252 3.5e-57 226.5 444 39.9
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 8.2e-54 215.3 439 36.7
Gohir.A08G243900 Gossypium hirsutum HOM05D006668 ORTHO05D008252 3.1e-53 213.4 441 38.5
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 3.4e-52 209.9 422 39.1
Gorai.004G282700 Gossypium raimondii HOM05D006668 ORTHO05D008252 4.5e-52 209.5 435 37.9
PGSC0003DMG400009383 Solanum tuberosum HOM05D006668 ORTHO05D008252 5.8e-52 209.1 436 38.1
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 1.0e-51 208.4 478 35.1
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 2.2e-51 207.2 444 36.7
Rhsim06G0136200 Rhododendron simsii HOM05D006668 ORTHO05D008252 2.9e-51 206.8 428 38.1
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 3.2e-50 203.4 479 35.5
Gohir.D08G264800 Gossypium hirsutum HOM05D006668 ORTHO05D008252 9.3e-50 201.8 435 37.7
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 2.7e-49 200.3 433 36.5
Duzib132G0616 Durio zibethinus HOM05D006668 ORTHO05D008252 2.7e-49 200.3 470 35.7
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 3.5e-49 199.9 425 38.4
COL.COLO4_07343 Corchorus olitorius HOM05D006668 ORTHO05D008252 6.0e-49 199.1 481 36.0
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 7.9e-49 198.7 468 36.5
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 1.3e-48 198.0 427 37.7
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 3.9e-48 196.4 423 38.8
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 5.1e-48 196.1 473 37.0
Solyc07g053560.3 Solanum lycopersicum HOM05D006668 ORTHO05D008252 6.7e-48 195.7 424 37.0
Cfa014669 Carpinus fangiana HOM05D006668 ORTHO05D008252 1.1e-47 194.9 449 35.6
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 3.3e-47 193.4 441 35.4
Prupe.2G094200 Prunus persica HOM05D006668 ORTHO05D008252 5.7e-47 192.6 428 36.9
MD15G1126800 Malus domestica HOM05D006668 ORTHO05D008252 7.4e-47 192.2 407 38.8
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 7.4e-47 192.2 459 37.0
Hma1.2p1_0002F.1_g002320 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 1.3e-46 191.4 209 50.2
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 1.6e-46 191.0 483 34.0
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 3.1e-45 186.8 434 35.9
Aa31LG5G3090 Aethionema arabicum HOM05D006668 ORTHO05D008252 4.1e-45 186.4 444 36.5
Lalb_Chr03g0029681 Lupinus albus HOM05D006668 ORTHO05D008252 6.9e-45 185.7 439 36.7
CANSAT54G0862 Cannabis sativa HOM05D006668 ORTHO05D008252 5.0e-43 179.5 407 36.1
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 8.5e-43 178.7 432 35.0
AL8G15870 Arabidopsis lyrata HOM05D006668 ORTHO05D008252 5.5e-42 176.0 424 35.8
PGR142G0029 Punica granatum HOM05D006668 ORTHO05D008252 1.2e-41 174.9 429 36.1
ECA232G0319 Erigeron canadensis HOM05D006668 ORTHO05D008252 2.1e-41 174.1 388 37.6
Lj3g0004052 Lotus japonicus HOM05D006668 ORTHO05D008252 1.4e-40 171.4 434 34.3
Sp2g08980 Schrenkiella parvula HOM05D006668 ORTHO05D008252 1.4e-40 171.4 425 34.1
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 2.3e-40 170.6 436 34.9
Carub.0008s0437 Capsella rubella HOM05D006668 ORTHO05D008252 5.1e-40 169.5 422 37.4
FAN08G3049 Fragaria x ananassa HOM05D006668 ORTHO05D008252 5.1e-40 169.5 422 35.5
THA.LOC104801157 Tarenaya hassleriana HOM05D006668 ORTHO05D008252 8.8e-40 168.7 450 35.3
FAN13G2061 Fragaria x ananassa HOM05D006668 ORTHO05D008252 1.1e-39 168.3 422 34.8
HanXRQChr17g0555041 Helianthus annuus HOM05D006668 ORTHO05D008252 1.1e-39 168.3 386 38.1
CARHR179120 Cardamine hirsuta HOM05D006668 ORTHO05D008252 1.9e-39 167.5 390 37.4
Lsat_1_v5_gn_8_69500 Lactuca sativa HOM05D006668 ORTHO05D008252 2.5e-39 167.2 392 35.5
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea HOM05D006668 ORTHO05D008252 3.3e-39 166.8 443 35.0
CiPaw.03G182600 Carya illinoinensis HOM05D006668 ORTHO05D008252 3.3e-39 166.8 440 35.0
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 3.3e-39 166.8 424 36.6
CAN.G1808.7 Capsicum annuum HOM05D006668 ORTHO05D008252 4.3e-39 166.4 379 37.2
Glyma.12G119000 Glycine max HOM05D006668 ORTHO05D008252 4.3e-39 166.4 441 33.8
Nn1g06398 Nelumbo nucifera HOM05D006668 ORTHO05D008252 4.3e-39 166.4 346 37.9
Thhalv10003234m.g Eutrema salsugineum HOM05D006668 ORTHO05D008252 7.4e-39 165.6 420 34.5
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 2.2e-38 164.1 439 35.3
Nitab4.5_0000621g0040 Nicotiana tabacum HOM05D006668 ORTHO05D008252 2.2e-38 164.1 438 35.2
Nitab4.5_0006091g0020 Nicotiana tabacum HOM05D006668 ORTHO05D008252 2.2e-38 164.1 439 35.3
FAN18G2410 Fragaria x ananassa HOM05D006668 ORTHO05D008252 4.8e-38 162.9 422 34.1
MELO3C018863.2 Cucumis melo HOM05D006668 ORTHO05D008252 4.1e-37 159.8 428 34.8
PSO541G3384 Papaver somniferum HOM05D006668 ORTHO05D008252 4.1e-37 159.8 457 34.4
CsaV3_7G003140 Cucumis sativus L. HOM05D006668 ORTHO05D008252 6.9e-37 159.1 430 34.2
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 1.5e-36 157.9 440 33.4
BcaC04g21861 Brassica carinata HOM05D006668 ORTHO05D008252 2.0e-36 157.5 416 35.3
AT5G44150 Arabidopsis thaliana HOM05D006668 ORTHO05D008252 2.6e-36 157.1 395 34.7
BolC9t55549H Brassica oleracea HOM05D006668 ORTHO05D008252 1.0e-35 155.2 415 35.7
Aqoxy1G02297 Aquilegia oxysepala HOM05D006668 ORTHO05D008252 2.9e-35 153.7 490 31.2
C09p26530 Brassica napus HOM05D006668 ORTHO05D008252 3.8e-35 153.3 415 35.4
ClCG03G006150 Citrullus lanatus HOM05D006668 ORTHO05D008252 3.8e-35 153.3 441 32.7
PSO675G8266 Papaver somniferum HOM05D006668 ORTHO05D008252 5.0e-35 152.9 453 32.9
Potri.017G017200 Populus trichocarpa HOM05D006668 ORTHO05D008252 6.5e-35 152.5 505 30.3
ClCG00G003780 Citrullus lanatus HOM05D006668 ORTHO05D008252 1.1e-34 151.8 440 33.6
ClCG02G002300 Citrullus lanatus HOM05D006668 ORTHO05D008252 1.1e-34 151.8 440 33.6
Oeu016899.1 Olea europaea HOM05D006668 ORTHO05D008252 9.4e-34 148.7 281 39.5
Hund01006 Selenicereus undatus HOM05D006668 ORTHO05D008252 1.6e-33 147.9 453 34.2
Sc12g0003270 Simmondsia chinensis HOM05D006668 ORTHO05D008252 2.1e-33 147.5 430 32.1
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 2.1e-33 147.5 428 32.9
A09p20930 Brassica napus HOM05D006668 ORTHO05D008252 1.0e-32 145.2 421 33.7
BraA09t37693Z Brassica rapa HOM05D006668 ORTHO05D008252 1.0e-32 145.2 421 33.7
Psat7g136840 Pisum sativum HOM05D006668 ORTHO05D008252 8.8e-32 142.1 411 34.5
TPR.G14253 Trifolium pratense HOM05D006668 ORTHO05D008252 1.1e-31 141.7 444 33.1
CDE10G0622 Ceratophyllum demersum HOM05D006668 ORTHO05D008252 5.7e-31 139.4 419 31.7
Phvul.010G089800 Phaseolus vulgaris HOM05D006668 ORTHO05D008252 1.3e-30 138.3 429 32.6
Sabra17G0013400 Salix brachista HOM05D006668 ORTHO05D008252 6.3e-30 136.0 469 29.9
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 8.2e-30 135.6 438 32.9
Haze_13261 Corylus avellana HOM05D006668 ORTHO05D008252 5.3e-29 132.9 170 47.1
BcaC06g31649 Brassica carinata HOM05D006668 ORTHO05D008252 5.9e-28 129.4 413 30.8
MBI06_g42697_MAGBIO Magnolia biondii HOM05D006668 ORTHO05D008252 9.4e-26 122.1 466 28.8
Duzib248G1400 Durio zibethinus HOM05D006668 ORTHO05D008252 2.6e-23 114.0 313 32.3
Eucgr.K01063 Eucalyptus grandis HOM05D006668 ORTHO05D008252 1.3e-22 111.7 443 29.8
HPP92_023281 Vanilla planifolia HOM05D006668 ORTHO05D008252 1.3e-22 111.7 450 26.9
CSS0015867 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 1.4e-21 108.2 126 52.4
CSS0030364 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 1.4e-21 108.2 126 52.4
Zm00001eb295870 Zea mays HOM05D006668 ORTHO05D008252 2.4e-21 107.5 388 29.9
BcaC04g21859 Brassica carinata HOM05D006668 ORTHO05D008252 4.1e-21 106.7 197 42.6
AUR62036068 Chenopodium quinoa HOM05D006668 ORTHO05D008252 3.5e-20 103.6 478 28.0
EL10Ac9g20828 Beta vulgaris HOM05D006668 ORTHO05D008252 1.3e-19 101.7 498 26.5
Os05g0564000 Oryza sativa ssp. japonica HOM05D006668 ORTHO05D008252 2.2e-19 100.9 210 37.1
unitig_46.g18247 Utricularia gibba HOM05D006668 ORTHO05D008252 1.0e-16 92.0 448 27.2
Dinv06849 Davidia involucrata HOM05D006668 ORTHO05D008252 4.4e-15 86.7 272 34.6
Sed0015399 Sechium edule HOM05D006668 ORTHO05D008252 4.4e-15 86.7 429 27.0
SEGI_30235 Sequoiadendron giganteum HOM05D006668 ORTHO05D008252 1.9e-10 71.2 433 25.9
ATR0602G055 Amborella trichopoda HOM05D006668 ORTHO05D008252 6.1e-09 66.2 302 26.2
BcaB07g30967 Brassica carinata HOM05D006668 ORTHO05D008252 8.8e-08 62.4 160 36.2


User provided reference genes

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