Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.9e-47 192.2 97 100.0
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 3.2e-39 164.9 96 82.3
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 7.1e-39 163.7 96 82.3
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 2.1e-38 162.2 96 78.1
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 2.1e-38 162.2 96 81.2
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 3.5e-38 161.4 96 79.2
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 3.5e-38 161.4 96 79.2
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 6.0e-38 160.6 96 81.2
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 6.0e-38 160.6 95 80.0
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 1.7e-37 159.1 96 80.2
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 1.7e-37 159.1 96 79.2
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 3.0e-37 158.3 96 78.1
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 3.9e-37 157.9 93 81.7
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 3.9e-37 157.9 96 79.2
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 5.1e-37 157.5 96 78.1
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 1.9e-36 155.6 98 78.6
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 2.5e-36 155.2 91 81.3
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 3.3e-36 154.8 96 79.2
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 7.3e-36 153.7 88 84.1
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 9.6e-36 153.3 96 77.1
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 9.6e-36 153.3 96 77.1
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 1.3e-35 152.9 96 77.1
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.3e-35 152.9 88 84.1
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 1.6e-35 152.5 96 75.0
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 1.6e-35 152.5 95 76.8
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 2.1e-35 152.1 95 77.9
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 4.8e-35 151.0 96 77.1
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 4.8e-35 151.0 96 74.0
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 6.2e-35 150.6 90 82.2
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 6.2e-35 150.6 99 73.7
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 6.2e-35 150.6 99 73.7
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 6.2e-35 150.6 99 73.7
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 6.2e-35 150.6 89 80.9
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 6.2e-35 150.6 93 76.3
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 6.2e-35 150.6 97 78.4
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 8.1e-35 150.2 96 78.1
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 1.1e-34 149.8 99 74.7
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 1.4e-34 149.4 94 78.7
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 2.4e-34 148.7 90 81.1
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 2.4e-34 148.7 89 77.5
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 2.4e-34 148.7 96 75.0
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 3.1e-34 148.3 98 73.5
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 3.1e-34 148.3 89 76.4
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 3.1e-34 148.3 90 80.0
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 4.0e-34 147.9 90 80.0
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 5.3e-34 147.5 99 72.7
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 6.9e-34 147.1 88 80.7
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 6.9e-34 147.1 94 75.5
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 1.5e-33 146.0 89 82.0
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 1.5e-33 146.0 96 75.0
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 1.5e-33 146.0 123 63.4
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 2.0e-33 145.6 97 76.3
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 2.0e-33 145.6 96 74.0
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 2.0e-33 145.6 88 78.4
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 2.0e-33 145.6 88 80.7
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 2.0e-33 145.6 88 80.7
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 2.0e-33 145.6 88 80.7
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 3.4e-33 144.8 96 74.0
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 3.4e-33 144.8 89 80.9
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 1.3e-32 142.9 94 74.5
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 2.2e-32 142.1 96 72.9
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 2.9e-32 141.7 96 72.9
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 2.9e-32 141.7 101 69.3
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 4.9e-32 141.0 96 71.9
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 4.9e-32 141.0 97 70.1
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 6.4e-32 140.6 89 75.3
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 8.4e-32 140.2 95 67.4
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 1.4e-31 139.4 96 69.8
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 1.4e-31 139.4 92 73.9
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 2.4e-31 138.7 90 75.6
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 2.4e-31 138.7 90 73.3
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 4.2e-31 137.9 88 71.6
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 9.3e-31 136.7 86 76.7
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 9.3e-31 136.7 95 71.6
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 1.6e-30 136.0 96 70.8
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 2.7e-30 135.2 90 73.3
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 2.7e-30 135.2 102 67.6
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 4.6e-30 134.4 86 75.6
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 1.3e-29 132.9 89 74.2
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 1.3e-29 132.9 80 81.2
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 1.8e-29 132.5 80 80.0
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 2.3e-29 132.1 89 71.9
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 2.3e-29 132.1 96 66.7
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 2.3e-29 132.1 96 66.7
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 2.3e-29 132.1 96 66.7
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 2.3e-29 132.1 96 66.7
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 5.1e-29 131.0 96 65.6
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 6.7e-29 130.6 87 75.9
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 8.7e-29 130.2 94 66.0
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 8.7e-29 130.2 79 77.2
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 1.1e-28 129.8 95 64.2
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 1.5e-28 129.4 89 70.8
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 2.5e-28 128.6 78 79.5
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 2.5e-28 128.6 97 69.1
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 3.3e-28 128.3 83 75.9
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 9.6e-28 126.7 89 69.7
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 9.6e-28 126.7 89 69.7
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 1.3e-27 126.3 89 69.7
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 2.1e-27 125.6 89 69.7
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 2.1e-27 125.6 89 69.7
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 3.7e-27 124.8 81 74.1
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 3.7e-27 124.8 89 68.5
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 6.2e-27 124.0 80 76.2
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 2.9e-24 115.2 84 66.7
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 6.0e-22 107.5 103 58.3
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 1.3e-21 106.3 81 60.5
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 2.3e-21 105.5 63 81.0
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 7.4e-20 100.5 87 58.6
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 2.8e-19 98.6 72 68.1
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 1.3e-16 89.7 81 51.9
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 4.2e-15 84.7 113 45.1
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 5.5e-15 84.3 47 87.2
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 2.3e-13 79.0 81 50.6
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 2.3e-13 79.0 73 60.3
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 3.0e-13 78.6 85 50.6
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 3.7e-11 71.6 76 56.6
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 3.1e-10 68.6 74 48.6
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 2.9e-08 62.0 41 75.6
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 5.5e-07 57.8 46 58.7


User provided reference genes

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