Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.0e-51 206.5 105 100.0
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 5.0e-38 161.0 102 81.4
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 7.2e-37 157.1 102 81.4
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 2.1e-36 155.6 103 77.7
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 3.9e-35 151.4 102 73.5
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 8.8e-35 150.2 107 72.9
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 1.5e-34 149.4 103 70.9
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 3.3e-34 148.3 101 73.3
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 2.2e-33 145.6 94 81.9
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 2.2e-33 145.6 104 74.0
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 8.2e-33 143.7 101 72.3
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 8.2e-33 143.7 99 71.7
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 1.8e-32 142.5 101 71.3
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 1.8e-32 142.5 101 71.3
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 1.8e-32 142.5 114 64.0
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 2.4e-32 142.1 114 64.0
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 9.1e-32 140.2 114 63.2
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 2.6e-31 138.7 104 66.3
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 3.5e-31 138.3 99 71.7
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 3.5e-31 138.3 103 68.9
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 5.9e-31 137.5 101 69.3
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 7.7e-31 137.1 99 67.7
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 7.7e-31 137.1 104 66.3
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 7.7e-31 137.1 104 66.3
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 1.0e-30 136.7 103 67.0
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 1.0e-30 136.7 103 68.0
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 1.3e-30 136.3 103 67.0
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 1.7e-30 136.0 99 67.7
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 1.7e-30 136.0 99 67.7
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 2.9e-30 135.2 110 63.6
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 2.9e-30 135.2 110 65.5
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 3.8e-30 134.8 102 71.6
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 5.0e-30 134.4 104 64.4
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 6.5e-30 134.0 109 64.2
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 1.1e-29 133.3 107 64.5
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 1.5e-29 132.9 105 67.6
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 3.2e-29 131.7 104 65.4
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 3.2e-29 131.7 104 65.4
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 3.2e-29 131.7 118 60.2
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 4.2e-29 131.3 108 61.1
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 5.5e-29 131.0 109 62.4
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 7.2e-29 130.6 103 65.0
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 7.2e-29 130.6 106 64.2
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 9.4e-29 130.2 106 62.3
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 9.4e-29 130.2 100 68.0
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 9.4e-29 130.2 104 64.4
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 9.4e-29 130.2 102 65.7
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 1.2e-28 129.8 102 62.7
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 1.2e-28 129.8 109 60.6
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 1.6e-28 129.4 109 60.6
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 2.1e-28 129.0 101 64.4
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 4.7e-28 127.9 105 62.9
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 4.7e-28 127.9 108 62.0
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 6.1e-28 127.5 95 68.4
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 6.1e-28 127.5 102 63.7
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 8.0e-28 127.1 110 60.9
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 8.0e-28 127.1 106 63.2
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 1.0e-27 126.7 107 61.7
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 1.8e-27 125.9 102 61.8
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 1.8e-27 125.9 101 62.4
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 3.0e-27 125.2 101 62.4
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 3.0e-27 125.2 110 58.2
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 3.0e-27 125.2 107 59.8
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 6.7e-27 124.0 105 60.0
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 6.7e-27 124.0 105 61.0
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 8.8e-27 123.6 107 60.7
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 1.1e-26 123.2 113 59.3
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.1e-26 123.2 110 58.2
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 1.1e-26 123.2 110 58.2
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 1.1e-26 123.2 107 60.7
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.0e-26 122.5 110 58.2
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 2.6e-26 122.1 105 61.9
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 4.4e-26 121.3 107 57.0
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 4.4e-26 121.3 113 55.8
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 5.7e-26 120.9 108 58.3
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 5.7e-26 120.9 108 58.3
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 9.7e-26 120.2 98 63.3
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 9.7e-26 120.2 102 60.8
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 1.7e-25 119.4 113 56.6
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 1.7e-25 119.4 106 59.4
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 2.8e-25 118.6 106 58.5
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 2.8e-25 118.6 105 57.1
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 3.7e-25 118.2 109 56.9
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 6.3e-25 117.5 99 58.6
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 1.1e-24 116.7 103 57.3
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 1.1e-24 116.7 110 56.4
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 4.1e-24 114.8 116 50.0
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 9.1e-24 113.6 119 50.4
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 1.2e-23 113.2 95 60.0
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 1.6e-23 112.8 119 50.4
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 1.6e-23 112.8 117 51.3
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 2.7e-23 112.1 116 50.9
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 3.5e-23 111.7 104 55.8
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 4.5e-23 111.3 101 57.4
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 5.9e-23 110.9 119 47.9
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 5.9e-23 110.9 104 55.8
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 7.7e-23 110.5 107 54.2
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 7.7e-23 110.5 119 47.9
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 7.7e-23 110.5 119 47.9
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 7.7e-23 110.5 119 47.9
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 1.0e-22 110.2 117 48.7
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 1.3e-22 109.8 122 46.7
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 3.8e-22 108.2 119 47.9
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 3.8e-22 108.2 104 52.9
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 6.5e-22 107.5 120 48.3
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 8.5e-22 107.1 114 50.0
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 1.9e-21 105.9 107 52.3
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 2.5e-21 105.5 93 57.0
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 2.5e-21 105.5 105 56.2
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 5.5e-21 104.4 117 46.2
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 1.6e-20 102.8 95 56.8
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 1.0e-19 100.1 117 42.7
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 1.4e-19 99.8 102 50.0
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 2.3e-19 99.0 117 44.4
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 2.3e-19 99.0 107 52.3
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 3.0e-19 98.6 108 44.4
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 8.8e-19 97.1 119 43.7
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 8.8e-19 97.1 119 43.7
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 1.5e-18 96.3 102 48.0
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 2.0e-18 95.9 105 44.8
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 7.5e-18 94.0 118 45.8
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 1.7e-17 92.8 109 46.8
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 1.7e-17 92.8 112 47.3
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 2.2e-17 92.4 113 43.4
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 1.3e-14 83.2 77 59.7
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 6.1e-12 74.3 61 65.6
SalBow6G6594 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.1e-08 63.5 56 60.7
SalBow6G5718 Salvia bowleyana HOM05D006069 ORTHO05D008101 2.0e-07 59.3 55 60.0
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 6.6e-06 54.3 66 42.4


User provided reference genes

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