Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4422 Salvia bowleyana HOM05D004908 ORTHO05D006418 3.9e-182 641.3 330 100.0
SalBow7G0217 Salvia bowleyana HOM05D004908 ORTHO05D006418 4.0e-126 455.3 333 71.5
SalBow7G1843 Salvia bowleyana HOM05D004908 ORTHO05D006418 6.0e-114 414.8 340 65.9
SalBow7G4769 Salvia bowleyana HOM05D004908 ORTHO05D006418 1.5e-104 383.6 351 63.5
MSTRG.9592 Avicennia marina HOM05D004908 ORTHO05D006418 1.2e-66 257.7 351 47.9
SGA_v2.0_scaffold51G18774 Striga asiatica HOM05D004908 ORTHO05D006418 1.0e-65 254.6 357 45.1
Migut.D01626 Erythranthe guttata HOM05D004908 ORTHO05D006418 5.7e-56 222.2 347 45.0
Oeu032097.2 Olea europaea HOM05D004908 ORTHO05D006418 1.7e-55 220.7 382 40.3
Cc00_g03370 Coffea canephora HOM05D004908 ORTHO05D006418 2.1e-50 203.8 242 48.8
Sopen12g018880 Solanum pennellii HOM05D004908 ORTHO05D006418 1.2e-48 198.0 285 42.8
Peaxi162Scf01223g00009 Petunia axillaris HOM05D004908 ORTHO05D006418 1.5e-48 197.6 265 45.7
Dinv17436 Davidia involucrata HOM05D004908 ORTHO05D006418 2.0e-48 197.2 363 39.9
Hma1.2p1_0060F.1_g032940 Hydrangea macrophylla HOM05D004908 ORTHO05D006418 2.0e-48 197.2 316 42.7
Haze_07746 Corylus avellana HOM05D004908 ORTHO05D006418 1.4e-46 191.0 227 50.7
Lsat_1_v5_gn_5_22901 Lactuca sativa HOM05D004908 ORTHO05D006418 1.4e-46 191.0 222 49.5
Lj9C439G11 Lonicera japonica HOM05D004908 ORTHO05D006418 1.4e-46 191.0 228 48.7
Prupe.5G207300 Prunus persica HOM05D004908 ORTHO05D006418 2.4e-46 190.3 269 45.0
Thecc.03G001900 Theobroma cacao HOM05D004908 ORTHO05D006418 2.0e-45 187.2 324 42.3
CiPaw.12G009100 Carya illinoinensis HOM05D004908 ORTHO05D006418 5.9e-45 185.7 327 40.1
HanXRQChr05g0153521 Helianthus annuus HOM05D004908 ORTHO05D006418 5.9e-45 185.7 222 48.2
TWI81G0201 Tripterygium wilfordii HOM05D004908 ORTHO05D006418 7.7e-45 185.3 239 46.4
Hund02570 Selenicereus undatus HOM05D004908 ORTHO05D006418 1.3e-44 184.5 320 41.2
Cfa019355 Carpinus fangiana HOM05D004908 ORTHO05D006418 1.7e-44 184.1 263 46.0
Duzib068G0428 Durio zibethinus HOM05D004908 ORTHO05D006418 2.9e-44 183.3 234 47.9
Gohir.A12G276800 Gossypium hirsutum HOM05D004908 ORTHO05D006418 3.8e-44 183.0 325 40.6
Lj4g0028183 Lotus japonicus HOM05D004908 ORTHO05D006418 5.0e-44 182.6 256 44.9
GSVIVG01008119001 Vitis vinifera HOM05D004908 ORTHO05D006418 6.6e-44 182.2 314 41.4
Atru.chr9.517 Acer truncatum HOM05D004908 ORTHO05D006418 8.6e-44 181.8 264 44.3
CSS0022679 Camellia sinensis var. sinensis HOM05D004908 ORTHO05D006418 8.6e-44 181.8 348 36.8
Gorai.008G298500 Gossypium raimondii HOM05D004908 ORTHO05D006418 8.6e-44 181.8 304 41.1
Ciclev10021158m.g Citrus clementina HOM05D004908 ORTHO05D006418 2.5e-43 180.3 320 40.0
Gohir.D12G277800 Gossypium hirsutum HOM05D004908 ORTHO05D006418 4.2e-43 179.5 247 45.7
Nitab4.5_0006506g0020 Nicotiana tabacum HOM05D004908 ORTHO05D006418 4.2e-43 179.5 219 47.0
MD14G1214000 Malus domestica HOM05D004908 ORTHO05D006418 7.2e-43 178.7 226 47.8
Eucgr.B00624 Eucalyptus grandis HOM05D004908 ORTHO05D006418 9.5e-43 178.3 271 42.1
Cpa.g.sc94.75 Carica papaya HOM05D004908 ORTHO05D006418 1.2e-42 177.9 265 44.9
ECA246G3883 Erigeron canadensis HOM05D004908 ORTHO05D006418 2.1e-42 177.2 226 46.9
arahy.Tifrunner.gnm1.ann1.J6BFMQ Arachis hypogaea HOM05D004908 ORTHO05D006418 2.8e-42 176.8 257 44.7
arahy.Tifrunner.gnm1.ann1.PAN20U Arachis hypogaea HOM05D004908 ORTHO05D006418 2.8e-42 176.8 257 44.7
Glyma.05G019500 Glycine max HOM05D004908 ORTHO05D006418 2.8e-42 176.8 273 42.5
Phvul.003G183300 Phaseolus vulgaris HOM05D004908 ORTHO05D006418 2.8e-42 176.8 228 45.6
THA.LOC104808039 Tarenaya hassleriana HOM05D004908 ORTHO05D006418 3.6e-42 176.4 228 46.1
Nitab4.5_0001797g0080 Nicotiana tabacum HOM05D004908 ORTHO05D006418 8.0e-42 175.3 356 36.2
CsaV3_1G006120 Cucumis sativus L. HOM05D004908 ORTHO05D006418 1.0e-41 174.9 227 46.3
QL10p019966 Quercus lobata HOM05D004908 ORTHO05D006418 1.8e-41 174.1 332 39.2
AT1G18600 Arabidopsis thaliana HOM05D004908 ORTHO05D006418 2.3e-41 173.7 221 45.7
CANSAT80G1354 Cannabis sativa HOM05D004908 ORTHO05D006418 2.3e-41 173.7 230 43.0
AL1G31040 Arabidopsis lyrata HOM05D004908 ORTHO05D006418 3.0e-41 173.3 221 45.7
Duzib205G0531 Durio zibethinus HOM05D004908 ORTHO05D006418 3.0e-41 173.3 234 44.9
Carub.0001s1823 Capsella rubella HOM05D004908 ORTHO05D006418 5.2e-41 172.6 221 45.7
Manes.14G087300 Manihot esculenta HOM05D004908 ORTHO05D006418 6.8e-41 172.2 232 46.1
RcHm_v2.0_Chr7g0183321 Rosa chinensis HOM05D004908 ORTHO05D006418 6.8e-41 172.2 226 47.3
Thhalv10008142m.g Eutrema salsugineum HOM05D004908 ORTHO05D006418 1.2e-40 171.4 215 46.5
Lalb_Chr07g0178341 Lupinus albus HOM05D004908 ORTHO05D006418 2.0e-40 170.6 267 42.3
A06p14680 Brassica napus HOM05D004908 ORTHO05D006418 3.4e-40 169.9 215 46.0
BraA06t24593Z Brassica rapa HOM05D004908 ORTHO05D006418 3.4e-40 169.9 215 46.0
CARHR019220 Cardamine hirsuta HOM05D004908 ORTHO05D006418 3.4e-40 169.9 215 45.1
FvH4_5g13640 Fragaria vesca HOM05D004908 ORTHO05D006418 3.4e-40 169.9 226 46.9
BolC5t30387H Brassica oleracea HOM05D004908 ORTHO05D006418 5.7e-40 169.1 250 42.4
Potri.006G227300 Populus trichocarpa HOM05D004908 ORTHO05D006418 5.7e-40 169.1 249 43.4
VMungo1215G2693 Vigna mungo HOM05D004908 ORTHO05D006418 5.7e-40 169.1 228 43.0
Prupe.5G207200 Prunus persica HOM05D004908 ORTHO05D006418 7.5e-40 168.7 226 45.6
TAR371G0785 Trochodendron aralioides HOM05D004908 ORTHO05D006418 7.5e-40 168.7 258 42.6
BcaC05g25755 Brassica carinata HOM05D004908 ORTHO05D006418 9.8e-40 168.3 250 42.4
C05p16860 Brassica napus HOM05D004908 ORTHO05D006418 9.8e-40 168.3 250 42.4
ClCG04G011680 Citrullus lanatus HOM05D004908 ORTHO05D006418 9.8e-40 168.3 270 41.5
TPR.G1983 Trifolium pratense HOM05D004908 ORTHO05D006418 9.8e-40 168.3 231 46.3
unitig_699.g19027 Utricularia gibba HOM05D004908 ORTHO05D006418 1.3e-39 167.9 290 39.3
BcaB07g31879 Brassica carinata HOM05D004908 ORTHO05D006418 1.7e-39 167.5 215 45.1
Sp1g16570 Schrenkiella parvula HOM05D004908 ORTHO05D006418 1.7e-39 167.5 215 45.1
Nn4g23471 Nelumbo nucifera HOM05D004908 ORTHO05D006418 2.2e-39 167.2 225 45.3
Sabra06G0175900 Salix brachista HOM05D004908 ORTHO05D006418 2.2e-39 167.2 245 42.4
Sed0013495 Sechium edule HOM05D004908 ORTHO05D006418 2.9e-39 166.8 223 44.4
DCAR_011562 Daucus carota HOM05D004908 ORTHO05D006418 6.3e-39 165.6 187 50.8
Medtr4g109700 Medicago truncatula HOM05D004908 ORTHO05D006418 1.4e-38 164.5 295 39.0
Aqoxy3G03654 Aquilegia oxysepala HOM05D004908 ORTHO05D006418 5.9e-37 159.1 221 42.1
Os01g0763100 Oryza sativa ssp. japonica HOM05D004908 ORTHO05D006418 7.8e-37 158.7 253 40.3
AUR62039652 Chenopodium quinoa HOM05D004908 ORTHO05D006418 1.0e-36 158.3 333 36.3
Aa31LG7G3360 Aethionema arabicum HOM05D004908 ORTHO05D006418 1.3e-36 157.9 214 43.5
Ah.11g047620 Amaranthus hybridus HOM05D004908 ORTHO05D006418 1.3e-36 157.9 347 35.4
EL10Ac5g11159 Beta vulgaris HOM05D004908 ORTHO05D006418 1.3e-36 157.9 216 43.1
MBI16_g10851_MAGBIO Magnolia biondii HOM05D004908 ORTHO05D006418 1.3e-36 157.9 309 39.8
Rhsim08G0143800 Rhododendron simsii HOM05D004908 ORTHO05D006418 1.3e-36 157.9 384 32.8
PSO478G4625 Papaver somniferum HOM05D004908 ORTHO05D006418 2.3e-36 157.1 209 45.0
HPP92_019201 Vanilla planifolia HOM05D004908 ORTHO05D006418 2.9e-36 156.8 244 40.2
CDE07G0469 Ceratophyllum demersum HOM05D004908 ORTHO05D006418 8.6e-36 155.2 250 42.8
MELO3C002041.2 Cucumis melo HOM05D004908 ORTHO05D006418 5.6e-35 152.5 178 51.7
PGR083G2541 Punica granatum HOM05D004908 ORTHO05D006418 1.2e-34 151.4 216 43.5
AUR62021531 Chenopodium quinoa HOM05D004908 ORTHO05D006418 2.8e-34 150.2 324 36.1
PSO017G6704 Papaver somniferum HOM05D004908 ORTHO05D006418 6.2e-34 149.1 208 44.2
PSO017G5063 Papaver somniferum HOM05D004908 ORTHO05D006418 8.0e-34 148.7 208 43.8
Manes.14G087101 Manihot esculenta HOM05D004908 ORTHO05D006418 6.8e-33 145.6 228 40.8
ATR0827G189 Amborella trichopoda HOM05D004908 ORTHO05D006418 8.9e-33 145.2 212 42.9
SHI17490 Sapria himalayana HOM05D004908 ORTHO05D006418 2.6e-32 143.7 209 42.1
FAN13G3071 Fragaria x ananassa HOM05D004908 ORTHO05D006418 6.4e-31 139.0 214 39.3
FAN13G1644 Fragaria x ananassa HOM05D004908 ORTHO05D006418 1.9e-30 137.5 215 40.5
Zm00001eb370410 Zea mays HOM05D004908 ORTHO05D006418 1.9e-30 137.5 212 44.3
FAN18G1888 Fragaria x ananassa HOM05D004908 ORTHO05D006418 2.4e-30 137.1 219 40.2
FAN08G0411 Fragaria x ananassa HOM05D004908 ORTHO05D006418 3.2e-30 136.7 253 37.9
vmacro17622 Vaccinium macrocarpon HOM05D004908 ORTHO05D006418 2.0e-29 134.0 226 40.3
AagrBONN_evm.TU.Sc2ySwM_368.1628 Anthoceros agrestis HOM05D004908 ORTHO05D006418 1.9e-27 127.5 221 39.4
Pp3c22_7870 Physcomitrium patens HOM05D004908 ORTHO05D006418 9.5e-27 125.2 214 41.1
Psat0s3566g0040 Pisum sativum HOM05D004908 ORTHO05D006418 2.8e-26 123.6 206 41.3
Mapoly0086s0048 Marchantia polymorpha HOM05D004908 ORTHO05D006418 3.6e-26 123.2 214 39.7
AL2G34040 Arabidopsis lyrata HOM05D004908 ORTHO05D006418 1.1e-25 121.7 211 39.3
AT1G74130 Arabidopsis thaliana HOM05D004908 ORTHO05D006418 1.4e-25 121.3 205 40.0
FvH4_5g13620 Fragaria vesca HOM05D004908 ORTHO05D006418 2.3e-25 120.6 164 40.9
Thhalv10019561m.g Eutrema salsugineum HOM05D004908 ORTHO05D006418 3.1e-25 120.2 201 40.8
PSO017G2617 Papaver somniferum HOM05D004908 ORTHO05D006418 1.2e-24 118.2 199 38.2
FAN08G1663 Fragaria x ananassa HOM05D004908 ORTHO05D006418 1.3e-23 114.8 226 38.1
Carub.0002s2094 Capsella rubella HOM05D004908 ORTHO05D006418 1.7e-23 114.4 222 36.0
FAN13G1921 Fragaria x ananassa HOM05D004908 ORTHO05D006418 4.9e-23 112.8 226 37.6
CARHR067290 Cardamine hirsuta HOM05D004908 ORTHO05D006418 8.3e-23 112.1 214 35.0
Solyc12g038600.2 Solanum lycopersicum HOM05D004908 ORTHO05D006418 1.4e-22 111.3 152 42.1
Carub.0002s2095 Capsella rubella HOM05D004908 ORTHO05D006418 7.1e-22 109.0 221 36.7
Sc04g0004310 Simmondsia chinensis HOM05D004908 ORTHO05D006418 7.1e-22 109.0 233 35.6
BcaC08g46817 Brassica carinata HOM05D004908 ORTHO05D006418 1.2e-21 108.2 222 34.7
BraA07t31547Z Brassica rapa HOM05D003320 ORTHO05D003941 1.6e-21 107.8 208 36.1
AT1G74140 Arabidopsis thaliana HOM05D004908 ORTHO05D006418 5.1e-20 102.8 184 38.6
RcHm_v2.0_Chr7g0183341 Rosa chinensis HOM05D004908 ORTHO05D006418 5.1e-20 102.8 121 48.8
HPP92_019191 Vanilla planifolia HOM05D004908 ORTHO05D006418 5.1e-20 102.8 128 46.1
MCO07G692 Micromonas commoda HOM05D004908 ORTHO05D006418 8.6e-20 102.1 227 34.4
Solyc12g038590.2 Solanum lycopersicum HOM05D004908 ORTHO05D006418 2.5e-19 100.5 213 36.2
Gohir.D10G255500 Gossypium hirsutum HOM05D004908 ORTHO05D006418 7.3e-19 99.0 145 42.8
RcHm_v2.0_Chr1g0346931 Rosa chinensis HOM05D004908 ORTHO05D006418 7.3e-19 99.0 155 43.9
vmacro17623 Vaccinium macrocarpon HOM05D004908 ORTHO05D006418 1.2e-18 98.2 94 55.3
C06p48280 Brassica napus HOM05D004908 ORTHO05D006418 2.8e-18 97.1 143 42.0
BolC6t39860H Brassica oleracea HOM05D004908 ORTHO05D006418 2.8e-18 97.1 145 42.1
SEGI_05482 Sequoiadendron giganteum HOM05D004908 ORTHO05D006418 8.1e-18 95.5 145 43.4
Prupe.3G124800 Prunus persica HOM05D004908 ORTHO05D006418 1.1e-17 95.1 270 34.1
BcaC08g46813 Brassica carinata HOM05D004908 ORTHO05D006418 1.4e-17 94.7 141 41.8
RcHm_v2.0_Chr6g0258631 Rosa chinensis HOM05D004908 ORTHO05D006418 3.1e-17 93.6 105 52.4
A07p40020 Brassica napus HOM05D003320 ORTHO05D003941 5.2e-17 92.8 139 43.9
C06p48290 Brassica napus HOM05D003320 ORTHO05D003941 2.0e-16 90.9 174 36.8
Actinidia04812 Actinidia chinensis HOM05D004908 ORTHO05D006418 3.4e-16 90.1 206 34.0
Gohir.A06G087200 Gossypium hirsutum HOM05D004908 ORTHO05D006418 4.9e-15 86.3 74 56.8
Glyma.17G080300 Glycine max HOM05D004908 ORTHO05D006418 4.1e-14 83.2 185 34.1
Actinidia13428 Actinidia chinensis HOM05D004908 ORTHO05D006418 4.6e-13 79.7 98 48.0
BcaC08g46846 Brassica carinata HOM05D003320 ORTHO05D003941 3.0e-12 77.0 295 29.5
CBR_g24070 Chara braunii HOM05D000019 ORTHO05D000002 9.6e-11 72.0 105 38.1
BcaC08g46819 Brassica carinata HOM05D004908 ORTHO05D039080 4.0e-09 66.6 93 39.8
RcHm_v2.0_Chr1g0346941 Rosa chinensis HOM05D004908 ORTHO05D006418 1.2e-08 65.1 70 47.1
RcHm_v2.0_Chr6g0258651 Rosa chinensis HOM05D004908 ORTHO05D006418 1.9e-06 57.8 139 33.8


User provided reference genes

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