Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4413 Salvia bowleyana HOM05D000252 ORTHO05D006173 9.5e-170 600.1 311 100.0
MSTRG.14758 Avicennia marina HOM05D000252 ORTHO05D006173 1.0e-46 191.4 259 49.0
Migut.H01382 Erythranthe guttata HOM05D000252 ORTHO05D006173 3.6e-44 183.0 259 47.1
Thecc.04G309700 Theobroma cacao HOM05D000252 ORTHO05D006173 7.6e-42 175.3 259 44.8
vmacro00029 Vaccinium macrocarpon HOM05D000252 ORTHO05D006173 1.6e-39 167.5 259 43.6
Gorai.005G070800 Gossypium raimondii HOM05D000252 ORTHO05D006173 2.7e-39 166.8 259 41.3
CSS0014928 Camellia sinensis var. sinensis HOM05D000252 ORTHO05D006173 7.8e-39 165.2 259 45.2
Sabra16G0306700 Salix brachista HOM05D000252 ORTHO05D006173 7.8e-39 165.2 259 43.6
FAN09G0108 Fragaria x ananassa HOM05D000252 ORTHO05D006173 1.0e-38 164.9 278 40.3
CANSAT01G0545 Cannabis sativa HOM05D000252 ORTHO05D006173 1.3e-38 164.5 259 40.5
Prupe.8G264400 Prunus persica HOM05D000252 ORTHO05D006173 2.3e-38 163.7 261 43.3
TAR622G0972 Trochodendron aralioides HOM05D000252 ORTHO05D006173 3.0e-38 163.3 259 40.9
Cc09_g09590 Coffea canephora HOM05D000252 ORTHO05D006173 3.9e-38 162.9 279 40.1
FAN14G4665 Fragaria x ananassa HOM05D000252 ORTHO05D006173 6.6e-38 162.2 278 39.9
FvH4_6g28040 Fragaria vesca HOM05D000252 ORTHO05D006173 8.6e-38 161.8 278 39.9
FAN05G2628 Fragaria x ananassa HOM05D001214 ORTHO05D006173 8.6e-38 161.8 278 40.3
TAR629G1221 Trochodendron aralioides HOM05D000252 ORTHO05D006173 1.5e-37 161.0 259 40.2
CAN.G397.84 Capsicum annuum HOM05D000252 ORTHO05D006173 5.6e-37 159.1 259 40.2
Ciclev10001762m.g Citrus clementina HOM05D000252 ORTHO05D006173 5.6e-37 159.1 157 52.9
Potri.001G453500 Populus trichocarpa HOM05D000252 ORTHO05D006173 9.6e-37 158.3 259 41.3
Actinidia25893 Actinidia chinensis HOM05D000252 ORTHO05D006173 1.6e-36 157.5 259 40.5
AL6G13700 Arabidopsis lyrata HOM05D000252 ORTHO05D006173 1.6e-36 157.5 279 40.1
Lj2C148T2 Lonicera japonica HOM05D000252 ORTHO05D006173 1.6e-36 157.5 240 45.4
ECA246G4804 Erigeron canadensis HOM05D001361 ORTHO05D006173 3.6e-36 156.4 279 40.1
Oeu021515.1 Olea europaea HOM05D000252 ORTHO05D006173 3.6e-36 156.4 259 43.6
AT5G04070 Arabidopsis thaliana HOM05D000252 ORTHO05D006173 1.1e-35 154.8 278 39.9
Cfa010656 Carpinus fangiana HOM05D000252 ORTHO05D006173 1.1e-35 154.8 283 39.9
COL.COLO4_34295 Corchorus olitorius HOM05D000252 ORTHO05D006173 1.1e-35 154.8 257 40.9
TWI81G1050 Tripterygium wilfordii HOM05D000252 ORTHO05D006173 1.1e-35 154.8 259 41.3
PGSC0003DMG400008940 Solanum tuberosum HOM05D000252 ORTHO05D006173 3.1e-35 153.3 259 39.4
Cpa.g.sc87.4 Carica papaya HOM05D000252 ORTHO05D006173 4.0e-35 152.9 259 41.7
Sopen09g004890 Solanum pennellii HOM05D000252 ORTHO05D006173 4.0e-35 152.9 274 37.6
Lsat_1_v5_gn_5_112420 Lactuca sativa HOM05D000252 ORTHO05D006173 5.2e-35 152.5 262 39.3
Lalb_Chr23g0271541 Lupinus albus HOM05D000252 ORTHO05D006173 6.8e-35 152.1 259 40.2
SalBow1G7354 Salvia bowleyana HOM05D000252 ORTHO05D006173 6.8e-35 152.1 182 50.5
EL10Ac7g17138 Beta vulgaris HOM05D000252 ORTHO05D006173 8.9e-35 151.8 266 39.8
Manes.01G013300 Manihot esculenta HOM05D000252 ORTHO05D006173 8.9e-35 151.8 169 53.3
GSVIVG01035561001 Vitis vinifera HOM05D000252 ORTHO05D006173 2.0e-34 150.6 259 39.8
Carub.0006s0303 Capsella rubella HOM05D000252 ORTHO05D006173 3.4e-34 149.8 259 38.6
CiPaw.11G106500 Carya illinoinensis HOM05D000252 ORTHO05D006173 4.4e-34 149.4 158 53.2
MD15G1141600 Malus domestica HOM05D000252 ORTHO05D006173 5.8e-34 149.1 292 38.7
AT5G15940 Arabidopsis thaliana HOM05D000252 ORTHO05D006173 9.9e-34 148.3 259 40.2
Solyc09g010150.4 Solanum lycopersicum HOM05D000252 ORTHO05D006173 9.9e-34 148.3 156 51.3
CARHR209200 Cardamine hirsuta HOM05D000252 ORTHO05D006173 1.3e-33 147.9 259 39.0
RcHm_v2.0_Chr6g0247031 Rosa chinensis HOM05D000252 ORTHO05D006173 1.3e-33 147.9 259 39.4
RcHm_v2.0_Chr2g0131741 Rosa chinensis HOM05D000252 ORTHO05D006173 1.7e-33 147.5 259 38.2
Peaxi162Scf01205g00153 Petunia axillaris HOM05D000252 ORTHO05D006173 2.2e-33 147.1 156 50.0
QL07p028735 Quercus lobata HOM05D000252 ORTHO05D006173 2.2e-33 147.1 253 41.9
RcHm_v2.0_Chr5g0041951 Rosa chinensis HOM05D001077 ORTHO05D006173 2.2e-33 147.1 259 39.0
THA.LOC104816406 Tarenaya hassleriana HOM05D000252 ORTHO05D006173 2.2e-33 147.1 259 39.8
C09p72770 Brassica napus HOM05D000087 ORTHO05D006949 2.9e-33 146.7 287 37.6
AUR62029802 Chenopodium quinoa HOM05D000252 ORTHO05D006173 2.9e-33 146.7 258 38.4
Gohir.D02G062900 Gossypium hirsutum HOM05D000252 ORTHO05D006173 2.9e-33 146.7 177 45.2
Thhalv10007998m.g Eutrema salsugineum HOM05D000252 ORTHO05D006173 3.8e-33 146.4 260 38.8
MBI04_g45215_MAGBIO Magnolia biondii HOM05D000252 ORTHO05D006173 3.8e-33 146.4 262 39.3
HanXRQChr06g0172631 Helianthus annuus HOM05D000252 ORTHO05D006173 4.9e-33 146.0 259 39.8
Medtr3g091070 Medicago truncatula HOM05D000252 ORTHO05D006173 4.9e-33 146.0 241 41.5
BolC9t60015H Brassica oleracea HOM05D000087 ORTHO05D006949 6.4e-33 145.6 284 38.4
Aqoxy2G02648 Aquilegia oxysepala HOM05D000252 ORTHO05D006173 1.1e-32 144.8 259 39.0
A10p32050 Brassica napus HOM05D000087 ORTHO05D006949 1.4e-32 144.4 261 38.3
Haze_09230 Corylus avellana HOM05D000252 ORTHO05D006173 1.4e-32 144.4 254 40.2
unitig_61.g26060 Utricularia gibba HOM05D000252 ORTHO05D006173 1.4e-32 144.4 278 39.6
AL6G26820 Arabidopsis lyrata HOM05D000252 ORTHO05D006173 1.9e-32 144.1 259 38.6
BraA10t45249Z Brassica rapa HOM05D000252 ORTHO05D006173 1.9e-32 144.1 263 37.6
Peaxi162Scf00069g00511 Petunia axillaris HOM05D000252 ORTHO05D006173 2.4e-32 143.7 156 50.0
Lj1g0001797 Lotus japonicus HOM05D000252 ORTHO05D006173 3.2e-32 143.3 259 39.0
Carub.0006s1413 Capsella rubella HOM05D000252 ORTHO05D006173 4.2e-32 142.9 259 36.3
Nitab4.5_0000573g0180 Nicotiana tabacum HOM05D000252 ORTHO05D006173 4.2e-32 142.9 213 44.6
Aa31LG1G21250 Aethionema arabicum HOM05D000252 ORTHO05D006173 7.1e-32 142.1 296 36.8
Medtr3g009190 Medicago truncatula HOM05D000252 ORTHO05D006173 1.2e-31 141.4 261 39.8
Phvul.009G054600 Phaseolus vulgaris HOM05D000252 ORTHO05D006173 1.2e-31 141.4 241 39.8
Medtr6g453040 Medicago truncatula HOM05D000252 ORTHO05D006173 1.6e-31 141.0 259 40.2
Sp6g28170 Schrenkiella parvula HOM05D000252 ORTHO05D006173 1.6e-31 141.0 259 37.1
Thhalv10013855m.g Eutrema salsugineum HOM05D000252 ORTHO05D006173 2.1e-31 140.6 264 36.7
BcaC06g32112 Brassica carinata HOM05D000252 ORTHO05D006173 3.5e-31 139.8 255 36.9
Thhalv10013899m.g Eutrema salsugineum HOM05D000252 ORTHO05D006173 3.5e-31 139.8 261 36.4
BcaC03g18461 Brassica carinata HOM05D000252 ORTHO05D006173 4.6e-31 139.4 257 37.4
Sc02g0006470 Simmondsia chinensis HOM05D000252 ORTHO05D006173 6.0e-31 139.0 259 38.6
Rhsim02G0119800 Rhododendron simsii HOM05D000252 ORTHO05D006173 7.8e-31 138.7 156 51.3
arahy.Tifrunner.gnm1.ann1.VK1FTJ Arachis hypogaea HOM05D000252 ORTHO05D006173 1.3e-30 137.9 157 51.0
arahy.Tifrunner.gnm1.ann1.6GL1RL Arachis hypogaea HOM05D000252 ORTHO05D006173 1.7e-30 137.5 156 50.6
Ah.08g209090 Amaranthus hybridus HOM05D000252 ORTHO05D006173 2.3e-30 137.1 258 37.2
Sed0023253 Sechium edule HOM05D000252 ORTHO05D006173 3.0e-30 136.7 259 39.8
arahy.Tifrunner.gnm1.ann1.32U02B Arachis hypogaea HOM05D000252 ORTHO05D006173 3.9e-30 136.3 156 50.6
A02p03310 Brassica napus HOM05D005209 ORTHO05D006188 3.9e-30 136.3 257 37.0
VMungo1309G0630 Vigna mungo HOM05D000252 ORTHO05D006173 5.1e-30 136.0 259 37.5
ATR0824G073 Amborella trichopoda HOM05D000252 ORTHO05D006173 6.6e-30 135.6 262 36.6
BcaNung02217 Brassica carinata HOM05D000252 ORTHO05D006173 1.1e-29 134.8 259 35.9
Nn2g15901 Nelumbo nucifera HOM05D000252 ORTHO05D006173 1.1e-29 134.8 196 44.4
BcaNung02216 Brassica carinata HOM05D000252 ORTHO05D006173 1.9e-29 134.0 257 35.8
CARHR197370 Cardamine hirsuta HOM05D000252 ORTHO05D006173 1.9e-29 134.0 259 37.5
CsaV3_5G018710 Cucumis sativus L. HOM05D000252 ORTHO05D006173 7.3e-29 132.1 259 38.6
PSO566G0118 Papaver somniferum HOM05D000252 ORTHO05D006173 7.3e-29 132.1 259 37.5
PSO782G5386 Papaver somniferum HOM05D000252 ORTHO05D006173 7.3e-29 132.1 259 37.1
Sc02g0006460 Simmondsia chinensis HOM05D000252 ORTHO05D006173 7.3e-29 132.1 155 48.4
Sc02g0006450 Simmondsia chinensis HOM05D000252 ORTHO05D006173 9.6e-29 131.7 155 47.7
Aa31LG11G13660 Aethionema arabicum HOM05D000252 ORTHO05D006173 1.3e-28 131.3 286 35.7
Eucgr.E01111 Eucalyptus grandis HOM05D000252 ORTHO05D006173 1.3e-28 131.3 258 37.6
Eucgr.E01120 Eucalyptus grandis HOM05D000252 ORTHO05D006173 2.1e-28 130.6 258 37.6
Glyma.06G126500 Glycine max HOM05D000252 ORTHO05D006173 2.1e-28 130.6 259 38.6
C02p08070 Brassica napus HOM05D005209 ORTHO05D006188 2.8e-28 130.2 259 35.5
BolC2t06729H Brassica oleracea HOM05D005209 ORTHO05D006188 2.8e-28 130.2 259 35.5
SGA_v2.0_scaffold51G18622 Striga asiatica HOM05D000252 ORTHO05D006173 3.6e-28 129.8 175 50.3
BraA02t05302Z Brassica rapa HOM05D000252 ORTHO05D006173 8.1e-28 128.6 259 34.7
Psat5g078840 Pisum sativum HOM05D000252 ORTHO05D006173 1.5e-26 124.4 179 42.5
ClCG01G007270 Citrullus lanatus HOM05D000252 ORTHO05D006173 3.4e-26 123.2 283 36.4
Sp6g38670 Schrenkiella parvula HOM05D000252 ORTHO05D006173 5.8e-26 122.5 177 41.2
Sed0009717 Sechium edule HOM05D000252 ORTHO05D006173 9.9e-26 121.7 169 45.0
Glyma.04G237500 Glycine max HOM05D000252 ORTHO05D006173 8.4e-25 118.6 177 41.8
Psat5g078720 Pisum sativum HOM05D000252 ORTHO05D006173 1.4e-24 117.9 231 38.5
HPP92_005571 Vanilla planifolia HOM05D000252 ORTHO05D006173 4.2e-24 116.3 259 34.7
Dinv14544 Davidia involucrata HOM05D000252 ORTHO05D006173 4.6e-23 112.8 177 42.9
Ca_16687_v3 Cicer arietinum L. HOM05D000252 ORTHO05D006173 2.3e-22 110.5 259 35.1
Gohir.A02G057200 Gossypium hirsutum HOM05D000252 ORTHO05D006173 8.7e-22 108.6 176 40.9
Os09g0346600 Oryza sativa ssp. japonica HOM05D000252 ORTHO05D006173 1.5e-21 107.8 259 31.7
Zm00001eb310490 Zea mays HOM05D000252 ORTHO05D006173 1.5e-21 107.8 263 35.0
Hund17503 Selenicereus undatus HOM05D000252 ORTHO05D006173 1.6e-20 104.4 290 34.1
PGR031G2150 Punica granatum HOM05D000252 ORTHO05D006173 1.8e-19 100.9 200 38.0
SEGI_02143 Sequoiadendron giganteum HOM05D000252 ORTHO05D006173 3.1e-19 100.1 158 43.7
Pp3c26_3200 Physcomitrium patens HOM05D000252 ORTHO05D006173 8.4e-17 92.0 263 31.2
AUR62006449 Chenopodium quinoa HOM05D000252 ORTHO05D006173 4.2e-16 89.7 235 34.9
Mapoly0004s0285 Marchantia polymorpha HOM05D000252 ORTHO05D006173 4.2e-16 89.7 263 28.9
AUR62026982 Chenopodium quinoa HOM05D000252 ORTHO05D006173 9.3e-16 88.6 235 34.9
SMO259G0014 Selaginella moellendorffii HOM05D000252 ORTHO05D006173 2.1e-15 87.4 257 30.4
AagrBONN_evm.TU.Sc2ySwM_228.404 Anthoceros agrestis HOM05D000252 ORTHO05D006173 1.0e-14 85.1 262 27.5
SEGI_33256 Sequoiadendron giganteum HOM05D000252 ORTHO05D006173 1.8e-14 84.3 239 32.2
Atru.chr9.1816 Acer truncatum HOM05D000252 ORTHO05D006173 6.7e-14 82.4 115 45.2
Medtr3g009200 Medicago truncatula HOM05D000252 ORTHO05D006173 1.1e-11 75.1 68 55.9
CBR_g24314 Chara braunii HOM05D000252 ORTHO05D006173 1.4e-11 74.7 269 27.9
TPR.G20449 Trifolium pratense HOM05D000252 ORTHO05D006173 4.0e-11 73.2 69 53.6
Atru.chr9.1817 Acer truncatum HOM05D000252 ORTHO05D006173 2.6e-10 70.5 58 56.9
Haze_06490 Corylus avellana HOM05D000252 ORTHO05D006173 5.8e-10 69.3 112 41.1
TPR.G17297 Trifolium pratense HOM05D000252 ORTHO05D006173 4.9e-09 66.2 199 31.2
RcHm_v2.0_Chr7g0229791 Rosa chinensis HOM05D000252 ORTHO05D006173 5.5e-08 62.8 78 42.3
FAN05G1823 Fragaria x ananassa HOM05D000479 ORTHO05D017027 1.2e-07 61.6 105 37.1
Hma1.2p1_0064F.1_g034900 Hydrangea macrophylla HOM05D000252 ORTHO05D006173 3.0e-06 57.0 54 59.3


User provided reference genes

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