Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4382 Salvia bowleyana HOM05D004801 ORTHO05D005747 8.1e-84 313.9 186 100.0
SGA_v2.0_scaffold70G23526 Striga asiatica HOM05D004801 ORTHO05D005747 8.3e-36 154.5 186 54.8
Oeu019133.1 Olea europaea HOM05D004801 ORTHO05D005747 3.6e-31 139.0 197 51.3
SGA_v2.0_scaffold34G13950 Striga asiatica HOM05D004801 ORTHO05D005747 2.3e-30 136.3 188 53.7
SalBow4G0268 Salvia bowleyana HOM05D004801 ORTHO05D005747 1.5e-29 133.7 123 65.0
Migut.M00296 Erythranthe guttata HOM05D004801 ORTHO05D005747 1.7e-28 130.2 195 52.8
unitig_46.g18595 Utricularia gibba HOM05D004801 ORTHO05D005747 4.1e-27 125.6 181 47.0
MSTRG.14326 Avicennia marina HOM05D004801 ORTHO05D005747 2.9e-25 119.4 175 47.4
MSTRG.12824 Avicennia marina HOM05D004801 ORTHO05D005747 5.0e-25 118.6 192 49.5
SalBow1G1046 Salvia bowleyana HOM05D004801 ORTHO05D005747 1.0e-22 110.9 185 47.0
SalBow1G0370 Salvia bowleyana HOM05D004801 ORTHO05D005747 1.2e-21 107.5 96 67.7
SalBow1G6004 Salvia bowleyana HOM05D004801 ORTHO05D005747 1.2e-21 107.5 185 45.9
unitig_37.g12306 Utricularia gibba HOM05D004801 ORTHO05D005747 7.5e-21 104.8 173 43.4
Gorai.005G201200 Gossypium raimondii HOM05D004801 ORTHO05D005747 9.8e-21 104.4 199 38.7
Cpa.g.sc34.170 Carica papaya HOM05D004801 ORTHO05D005747 3.1e-19 99.4 187 39.6
Lj3g0028176 Lotus japonicus HOM05D004801 ORTHO05D005747 7.0e-19 98.2 206 38.8
Solyc10g008320.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 9.2e-19 97.8 189 41.8
VMungo0464G0320 Vigna mungo HOM05D004801 ORTHO05D005747 1.6e-18 97.1 185 39.5
Nitab4.5_0000638g0250 Nicotiana tabacum HOM05D004801 ORTHO05D005747 2.0e-18 96.7 185 38.4
Sopen10g004180 Solanum pennellii HOM05D004801 ORTHO05D005747 2.0e-18 96.7 189 40.7
Nitab4.5_0014741g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 2.7e-18 96.3 187 39.0
Gohir.A03G156300 Gossypium hirsutum HOM05D004801 ORTHO05D005747 3.5e-18 95.9 202 37.6
Lsat_1_v5_gn_8_135921 Lactuca sativa HOM05D004801 ORTHO05D005747 5.9e-18 95.1 197 39.6
Thecc.02G180400 Theobroma cacao HOM05D004801 ORTHO05D005747 5.9e-18 95.1 200 38.5
MELO3C018732.2 Cucumis melo HOM05D004801 ORTHO05D005747 7.8e-18 94.7 200 35.5
Glyma.12G204500 Glycine max HOM05D004801 ORTHO05D005747 1.3e-17 94.0 185 37.3
Glyma.12G204600 Glycine max HOM05D004801 ORTHO05D005747 1.7e-17 93.6 191 41.4
Glyma.13G296700 Glycine max HOM05D004801 ORTHO05D005747 1.7e-17 93.6 189 46.0
ClCG00G003550 Citrullus lanatus HOM05D004801 ORTHO05D005747 2.9e-17 92.8 196 37.2
ClCG07G002870 Citrullus lanatus HOM05D004801 ORTHO05D005747 2.9e-17 92.8 196 37.2
Cc05_g07190 Coffea canephora HOM05D004801 ORTHO05D005747 2.9e-17 92.8 193 44.0
CsaV3_7G004470 Cucumis sativus L. HOM05D004801 ORTHO05D005747 6.6e-17 91.7 197 35.5
PGSC0003DMG400013144 Solanum tuberosum HOM05D004801 ORTHO05D005747 1.1e-16 90.9 188 38.8
AT4G28310 Arabidopsis thaliana HOM05D004801 ORTHO05D005747 2.5e-16 89.7 189 40.2
Manes.13G146300 Manihot esculenta HOM05D004801 ORTHO05D005747 2.5e-16 89.7 210 35.7
Sc21g0002890 Simmondsia chinensis HOM05D004801 ORTHO05D005747 4.3e-16 89.0 199 37.2
BraA08t33972Z Brassica rapa HOM05D004801 ORTHO05D005747 7.3e-16 88.2 187 39.0
DCAR_013013 Daucus carota HOM05D004801 ORTHO05D005747 7.3e-16 88.2 188 38.3
BcaC09g50492 Brassica carinata HOM05D004801 ORTHO05D005747 1.2e-15 87.4 120 53.3
Duzib248G0607 Durio zibethinus HOM05D004801 ORTHO05D005747 1.6e-15 87.0 199 36.2
Sed0013547 Sechium edule HOM05D004801 ORTHO05D005747 1.6e-15 87.0 188 37.2
BcaNung01577 Brassica carinata HOM05D004801 ORTHO05D005747 2.1e-15 86.7 183 39.3
Duzib132G1264 Durio zibethinus HOM05D004801 ORTHO05D005747 2.1e-15 86.7 198 36.4
HanXRQChr17g0559281 Helianthus annuus HOM05D004801 ORTHO05D005747 4.7e-15 85.5 204 36.3
C01p24790 Brassica napus HOM05D004801 ORTHO05D005747 6.1e-15 85.1 121 52.9
BolC1t02426H Brassica oleracea HOM05D004801 ORTHO05D005747 6.1e-15 85.1 121 52.9
BcaB03g12566 Brassica carinata HOM05D004801 ORTHO05D005747 1.0e-14 84.3 190 37.4
A08p20130 Brassica napus HOM05D004801 ORTHO05D005747 1.4e-14 84.0 191 39.3
BraA01t01904Z Brassica rapa HOM05D004801 ORTHO05D005747 1.4e-14 84.0 185 40.5
CARHR236030 Cardamine hirsuta HOM05D004801 ORTHO05D005747 1.4e-14 84.0 184 34.8
Lalb_Chr14g0366971 Lupinus albus HOM05D004801 ORTHO05D005747 1.8e-14 83.6 201 34.8
Lalb_Chr24g0399901 Lupinus albus HOM05D004801 ORTHO05D005747 1.8e-14 83.6 213 33.8
Phvul.004G108200 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 1.8e-14 83.6 183 36.6
TPR.G6396 Trifolium pratense HOM05D004801 ORTHO05D005747 1.8e-14 83.6 202 35.6
Thhalv10027270m.g Eutrema salsugineum HOM05D004801 ORTHO05D005747 2.3e-14 83.2 188 36.7
Sp7g26270 Schrenkiella parvula HOM05D004801 ORTHO05D005747 2.3e-14 83.2 189 36.5
BcaC07g38324 Brassica carinata HOM05D004801 ORTHO05D005747 3.1e-14 82.8 186 37.6
C08p10790 Brassica napus HOM05D004801 ORTHO05D005747 3.1e-14 82.8 186 37.6
SalBow7G4186 Salvia bowleyana HOM05D000074 ORTHO05D000220 5.2e-14 82.0 62 74.2
TAR626G1782 Trochodendron aralioides HOM05D004801 ORTHO05D005747 5.2e-14 82.0 234 33.3
Peaxi162Scf00059g00194 Petunia axillaris HOM05D004801 ORTHO05D005747 6.8e-14 81.6 193 37.3
Gohir.D02G179400 Gossypium hirsutum HOM05D004801 ORTHO05D005747 8.9e-14 81.3 190 35.3
CSS0019593 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 1.2e-13 80.9 223 34.5
Dinv23632 Davidia involucrata HOM05D004801 ORTHO05D005747 3.4e-13 79.3 222 36.5
Medtr2g090385 Medicago truncatula HOM05D004801 ORTHO05D005747 3.4e-13 79.3 191 35.6
MSTRG.14327 Avicennia marina HOM05D004801 ORTHO05D005747 4.4e-13 79.0 118 50.0
Aa31LG10G480 Aethionema arabicum HOM05D004801 ORTHO05D005747 5.8e-13 78.6 142 40.8
Phvul.004G108100 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 5.8e-13 78.6 192 40.1
Aa31LG2G22170 Aethionema arabicum HOM05D004801 ORTHO05D005747 7.5e-13 78.2 183 37.7
Ca_01496_v3 Cicer arietinum L. HOM05D004801 ORTHO05D005747 9.8e-13 77.8 188 34.6
ECA234G0944 Erigeron canadensis HOM05D004801 ORTHO05D005747 1.3e-12 77.4 173 41.0
Hma1.2p1_0002F.1_g001940 Hydrangea macrophylla HOM05D004801 ORTHO05D005747 1.3e-12 77.4 213 37.1
RcHm_v2.0_Chr2g0126621 Rosa chinensis HOM05D004801 ORTHO05D005747 1.7e-12 77.0 194 38.1
C07p56130 Brassica napus HOM05D004801 ORTHO05D005747 2.2e-12 76.6 184 35.3
BolC8t48753H Brassica oleracea HOM05D004801 ORTHO05D005747 2.2e-12 76.6 186 34.9
Cfa014619 Carpinus fangiana HOM05D004801 ORTHO05D005747 2.2e-12 76.6 191 39.8
Prupe.3G132500 Prunus persica HOM05D004801 ORTHO05D005747 2.2e-12 76.6 208 39.4
CiPaw.03G177800 Carya illinoinensis HOM05D004801 ORTHO05D005747 2.9e-12 76.3 192 38.5
COL.COLO4_30200 Corchorus olitorius HOM05D004801 ORTHO05D005747 3.7e-12 75.9 200 32.0
Haze_13169 Corylus avellana HOM05D004801 ORTHO05D005747 3.7e-12 75.9 191 38.7
Nitab4.5_0000585g0130 Nicotiana tabacum HOM05D004801 ORTHO05D005747 3.7e-12 75.9 185 41.1
THA.LOC104824700 Tarenaya hassleriana HOM05D004801 ORTHO05D005747 4.9e-12 75.5 186 37.1
Ah.08g215280 Amaranthus hybridus HOM05D004801 ORTHO05D005747 8.3e-12 74.7 216 32.4
QL08p038965 Quercus lobata HOM05D004801 ORTHO05D005747 8.3e-12 74.7 188 37.8
BolC7t46088H Brassica oleracea HOM05D004801 ORTHO05D005747 1.4e-11 73.9 126 44.4
PGSC0003DMG400018341 Solanum tuberosum HOM05D004801 ORTHO05D005747 1.9e-11 73.6 186 36.0
Psat5g270840 Pisum sativum HOM05D004801 ORTHO05D005747 2.4e-11 73.2 121 43.0
Sopen07g027930 Solanum pennellii HOM05D004801 ORTHO05D005747 2.4e-11 73.2 186 36.0
A03p58010 Brassica napus HOM05D004801 ORTHO05D005747 4.1e-11 72.4 187 34.2
BraA03t14864Z Brassica rapa HOM05D004801 ORTHO05D005747 4.1e-11 72.4 187 34.2
BcaC06g32627 Brassica carinata HOM05D004801 ORTHO05D005747 5.4e-11 72.0 183 33.3
BcaC06g32628 Brassica carinata HOM05D004801 ORTHO05D005747 5.4e-11 72.0 183 33.3
Peaxi162Scf00132g00008 Petunia axillaris HOM05D004801 ORTHO05D005747 9.2e-11 71.2 185 34.6
Gohir.A04G103500 Gossypium hirsutum HOM05D004801 ORTHO05D005747 1.6e-10 70.5 131 41.2
Nitab4.5_0011784g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 1.6e-10 70.5 199 34.2
MD17G1239900 Malus domestica HOM05D004801 ORTHO05D005747 2.0e-10 70.1 204 34.3
GSVIVG01020552001 Vitis vinifera HOM05D004801 ORTHO05D005747 2.0e-10 70.1 43 65.1
Gorai.012G128300 Gossypium raimondii HOM05D004801 ORTHO05D005747 3.5e-10 69.3 199 34.7
EL10Ac9g20770 Beta vulgaris HOM05D004801 ORTHO05D005747 4.6e-10 68.9 212 37.3
Dinv26411 Davidia involucrata HOM05D004801 ORTHO05D005747 6.0e-10 68.6 42 69.0
VMungo0464G1438 Vigna mungo HOM05D004801 ORTHO05D005747 6.0e-10 68.6 186 34.4
AUR62022461 Chenopodium quinoa HOM05D004801 ORTHO05D005747 7.8e-10 68.2 188 32.4
Gohir.D04G142900 Gossypium hirsutum HOM05D004801 ORTHO05D005747 7.8e-10 68.2 199 34.7
Solyc07g053950.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 1.0e-09 67.8 185 34.1
Lsat_1_v5_gn_8_135941 Lactuca sativa HOM05D004801 ORTHO05D005747 1.7e-09 67.0 204 35.3
FvH4_6g26250 Fragaria vesca HOM05D004801 ORTHO05D005747 2.3e-09 66.6 185 35.1
SHI10398 Sapria himalayana HOM05D004801 ORTHO05D005747 3.0e-09 66.2 118 37.3
TWI36G1772 Tripterygium wilfordii HOM05D004801 ORTHO05D005747 3.0e-09 66.2 209 33.0
CAN.G578.5 Capsicum annuum HOM05D004801 ORTHO05D005747 3.9e-09 65.9 43 67.4
Rhsim06G0141800 Rhododendron simsii HOM05D004801 ORTHO05D005747 3.9e-09 65.9 42 71.4
AUR62040063 Chenopodium quinoa HOM05D004801 ORTHO05D005747 6.6e-09 65.1 216 36.6
Lj1P721T18 Lonicera japonica HOM05D004801 ORTHO05D005747 6.6e-09 65.1 84 45.2
arahy.Tifrunner.gnm1.ann1.KJ31KE Arachis hypogaea HOM05D004801 ORTHO05D005747 1.1e-08 64.3 229 30.1
AL7G24290 Arabidopsis lyrata HOM05D004801 ORTHO05D005747 2.5e-08 63.2 189 33.9
vmacro12308 Vaccinium macrocarpon HOM05D004801 ORTHO05D005747 3.3e-08 62.8 204 32.8
Eucgr.A01822 Eucalyptus grandis HOM05D004801 ORTHO05D005747 5.6e-08 62.0 213 27.2
Glyma.13G296800 Glycine max HOM05D004801 ORTHO05D005747 5.6e-08 62.0 85 47.1
Actinidia11029 Actinidia chinensis HOM05D004801 ORTHO05D005747 7.3e-08 61.6 217 35.5
FAN02G2956 Fragaria x ananassa HOM05D004801 ORTHO05D005747 7.3e-08 61.6 114 40.4
arahy.Tifrunner.gnm1.ann1.G6M6JD Arachis hypogaea HOM05D004801 ORTHO05D005747 9.5e-08 61.2 229 29.7
Atru.chr6.2990 Acer truncatum HOM05D004801 ORTHO05D005747 2.1e-07 60.1 185 31.4
Ciclev10016785m.g Citrus clementina HOM05D004801 ORTHO05D005747 2.1e-07 60.1 54 55.6
CSS0042810 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 2.8e-07 59.7 192 32.8
FAN09G3815 Fragaria x ananassa HOM05D004801 ORTHO05D005747 2.8e-07 59.7 38 71.1
Sabra13G0110300 Salix brachista HOM05D004801 ORTHO05D005747 2.8e-07 59.7 124 34.7
Aqoxy4G01981 Aquilegia oxysepala HOM05D004801 ORTHO05D005747 6.2e-07 58.5 42 59.5
PGR042G3918 Punica granatum HOM05D004801 ORTHO05D005747 6.2e-07 58.5 70 45.7
Sed0002865 Sechium edule HOM05D004801 ORTHO05D005747 8.0e-07 58.2 204 31.4
MBI18_g28947_MAGBIO Magnolia biondii HOM05D004801 ORTHO05D005747 1.4e-06 57.4 99 36.4
Os06g0115700 Oryza sativa ssp. japonica HOM05D004801 ORTHO05D005747 1.4e-06 57.4 33 75.8
Carub.0007s1244 Capsella rubella HOM05D004801 ORTHO05D005747 1.8e-06 57.0 186 32.8
Zm00001eb269130 Zea mays HOM05D004801 ORTHO05D005747 3.1e-06 56.2 33 72.7
Potri.013G130700 Populus trichocarpa HOM05D004801 ORTHO05D005747 4.0e-06 55.8 195 30.8


User provided reference genes

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