Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4343 Salvia bowleyana HOM05D004670 ORTHO05D008020 8.5e-210 733.4 366 100.0
SalBow7G3652 Salvia bowleyana HOM05D004670 ORTHO05D008020 4.2e-209 731.1 366 99.7
SGA_v2.0_scaffold52G18920 Striga asiatica HOM05D004670 ORTHO05D008020 4.4e-126 455.3 436 56.2
MSTRG.25359 Avicennia marina HOM05D004670 ORTHO05D008020 4.0e-119 432.2 431 53.1
Oeu040399.1 Olea europaea HOM05D004670 ORTHO05D008020 3.4e-110 402.5 441 51.2
Migut.C01066 Erythranthe guttata HOM05D004670 ORTHO05D008020 1.1e-108 397.5 432 50.5
Solyc11g005140.1 Solanum lycopersicum HOM05D004670 ORTHO05D008020 4.2e-100 369.0 440 47.7
PGSC0003DMG400006026 Solanum tuberosum HOM05D004670 ORTHO05D008020 2.1e-99 366.7 440 47.7
Sopen11g001140 Solanum pennellii HOM05D004670 ORTHO05D008020 4.6e-99 365.5 440 47.7
Aqoxy3G03703 Aquilegia oxysepala HOM05D004670 ORTHO05D008020 6.1e-99 365.2 411 44.8
Cfa014310 Carpinus fangiana HOM05D004670 ORTHO05D008020 6.7e-98 361.7 412 47.8
Nitab4.5_0008751g0030 Nicotiana tabacum HOM05D004670 ORTHO05D008020 2.5e-97 359.8 440 48.0
Haze_20607 Corylus avellana HOM05D004670 ORTHO05D008020 4.8e-96 355.5 389 49.6
CAN.G716.1 Capsicum annuum HOM05D004670 ORTHO05D008020 8.2e-96 354.8 437 45.5
Peaxi162Scf00066g00021 Petunia axillaris HOM05D004670 ORTHO05D008020 3.1e-95 352.8 435 47.4
QL10p048429 Quercus lobata HOM05D004670 ORTHO05D008020 5.3e-95 352.1 412 47.6
TAR362G1162 Trochodendron aralioides HOM05D004670 ORTHO05D008020 2.0e-94 350.1 422 45.0
Sed0002677 Sechium edule HOM05D004670 ORTHO05D008020 1.9e-92 343.6 412 44.7
TWI18G1064 Tripterygium wilfordii HOM05D004670 ORTHO05D008020 1.9e-92 343.6 421 45.6
Haze_12758 Corylus avellana HOM05D004670 ORTHO05D008020 2.5e-92 343.2 389 48.3
MD00G1017000 Malus domestica HOM05D004670 ORTHO05D008020 7.2e-92 341.7 413 46.7
Gohir.D13G219500 Gossypium hirsutum HOM05D004670 ORTHO05D008020 7.9e-91 338.2 425 43.1
CiPaw.07G084800 Carya illinoinensis HOM05D004670 ORTHO05D008020 1.4e-90 337.4 412 46.4
MELO3C008575.2 Cucumis melo HOM05D004670 ORTHO05D008020 3.0e-90 336.3 412 43.4
MBI07_g36706_MAGBIO Magnolia biondii HOM05D004670 ORTHO05D008020 8.8e-90 334.7 411 45.0
CSS0027504 Camellia sinensis var. sinensis HOM05D004670 ORTHO05D008020 4.4e-89 332.4 425 44.7
CSS0030730 Camellia sinensis var. sinensis HOM05D004670 ORTHO05D008020 4.4e-89 332.4 425 44.7
Dinv17145 Davidia involucrata HOM05D004670 ORTHO05D008020 4.4e-89 332.4 415 44.6
Nitab4.5_0001348g0230 Nicotiana tabacum HOM05D004670 ORTHO05D008020 5.7e-89 332.0 440 45.0
Thecc.06G195000 Theobroma cacao HOM05D004670 ORTHO05D008020 2.4e-87 326.6 422 42.9
COL.COLO4_09284 Corchorus olitorius HOM05D004670 ORTHO05D008020 1.3e-85 320.9 413 42.4
EL10Ac7g17697 Beta vulgaris HOM05D004670 ORTHO05D008020 2.2e-85 320.1 419 42.5
Ciclev10004046m.g Citrus clementina HOM05D004670 ORTHO05D008020 5.0e-85 318.9 411 43.6
Manes.13G000200 Manihot esculenta HOM05D004670 ORTHO05D008020 5.0e-85 318.9 410 42.4
EL10Ac4g10032 Beta vulgaris HOM05D004670 ORTHO05D008020 1.1e-84 317.8 423 42.6
AUR62025405 Chenopodium quinoa HOM05D004670 ORTHO05D008020 1.9e-84 317.0 419 42.5
Gohir.A13G215800 Gossypium hirsutum HOM05D004670 ORTHO05D008020 2.5e-84 316.6 425 40.7
Gorai.013G250400 Gossypium raimondii HOM05D004670 ORTHO05D008020 5.5e-84 315.5 425 40.9
Atru.chr2.211 Acer truncatum HOM05D004670 ORTHO05D008020 9.4e-84 314.7 411 41.4
Ah.06g195210 Amaranthus hybridus HOM05D004670 ORTHO05D008020 6.1e-83 312.0 430 40.5
AUR62008838 Chenopodium quinoa HOM05D004670 ORTHO05D008020 1.0e-82 311.2 419 41.8
Rhsim05G0163600 Rhododendron simsii HOM05D004670 ORTHO05D008020 1.4e-82 310.8 411 41.4
Duzib150G0183 Durio zibethinus HOM05D004670 ORTHO05D008020 1.8e-82 310.5 425 41.6
Nn1g09528 Nelumbo nucifera HOM05D004670 ORTHO05D008020 5.2e-82 308.9 259 56.0
CANSAT54G2504 Cannabis sativa HOM05D004670 ORTHO05D008020 1.1e-81 307.8 426 41.3
CsaV3_2G010440 Cucumis sativus L. HOM05D004670 ORTHO05D008020 2.0e-81 307.0 412 40.5
Sabra16G0238400 Salix brachista HOM05D004670 ORTHO05D008020 2.6e-81 306.6 411 41.6
Lj8P583T10 Lonicera japonica HOM05D004670 ORTHO05D008020 3.3e-81 306.2 429 42.0
Sc16g0010690 Simmondsia chinensis HOM05D004670 ORTHO05D008020 5.7e-81 305.4 422 41.5
Ca_16311_v3 Cicer arietinum L. HOM05D004670 ORTHO05D008020 7.4e-81 305.1 415 40.2
Phvul.008G212400 Phaseolus vulgaris HOM05D004670 ORTHO05D008020 7.4e-81 305.1 427 40.3
Eucgr.B01443 Eucalyptus grandis HOM05D004670 ORTHO05D008020 9.7e-81 304.7 425 41.4
QL10p044086 Quercus lobata HOM05D004670 ORTHO05D008020 1.7e-80 303.9 260 59.2
arahy.Tifrunner.gnm1.ann1.H9JUXY Arachis hypogaea HOM05D004670 ORTHO05D008020 1.8e-79 300.4 412 38.6
DCAR_024376 Daucus carota HOM05D004670 ORTHO05D008020 1.8e-79 300.4 419 41.5
ECA246G0724 Erigeron canadensis HOM05D004670 ORTHO05D008020 1.8e-79 300.4 418 41.9
Prupe.6G365500 Prunus persica HOM05D004670 ORTHO05D008020 2.4e-79 300.1 428 43.2
ECA236G4653 Erigeron canadensis HOM05D004670 ORTHO05D008020 7.0e-79 298.5 419 41.3
Eucgr.L01231 Eucalyptus grandis HOM05D004670 ORTHO05D008020 9.1e-79 298.1 425 40.9
Potri.001G361500 Populus trichocarpa HOM05D004670 ORTHO05D008020 4.5e-78 295.8 411 40.4
Glyma.15G017400 Glycine max HOM05D004670 ORTHO05D008020 1.7e-77 293.9 423 40.0
ATR0743G160 Amborella trichopoda HOM05D004670 ORTHO05D008020 2.9e-77 293.1 428 39.0
Lsat_1_v5_gn_7_7580 Lactuca sativa HOM05D004670 ORTHO05D008020 5.0e-77 292.4 420 39.0
VMungo0647G0492 Vigna mungo HOM05D004670 ORTHO05D008020 5.0e-77 292.4 424 39.6
CDE06G0776 Ceratophyllum demersum HOM05D004670 ORTHO05D008020 8.5e-77 291.6 272 50.7
Glyma.13G356700 Glycine max HOM05D004670 ORTHO05D008020 1.5e-76 290.8 422 39.8
HanXRQChr16g0532601 Helianthus annuus HOM05D004670 ORTHO05D008020 4.7e-75 285.8 432 39.4
Psat5g107920 Pisum sativum HOM05D004670 ORTHO05D008020 5.2e-74 282.3 417 38.6
AUR62044648 Chenopodium quinoa HOM05D004670 ORTHO05D008020 7.5e-73 278.5 262 52.7
Cc10_g12810 Coffea canephora HOM05D004670 ORTHO05D008020 3.7e-72 276.2 451 38.4
HanXRQChr02g0056371 Helianthus annuus HOM05D004670 ORTHO05D008020 1.1e-71 274.6 436 38.3
PGR119G2020 Punica granatum HOM05D004670 ORTHO05D008020 1.1e-71 274.6 423 38.1
Thhalv10020352m.g Eutrema salsugineum HOM05D004670 ORTHO05D008020 3.5e-70 269.6 427 37.5
Lalb_Chr13g0290441 Lupinus albus HOM05D004670 ORTHO05D008020 2.3e-66 256.9 455 35.6
PSO017G2252 Papaver somniferum HOM05D004670 ORTHO05D008020 6.8e-66 255.4 426 35.4
THA.LOC104827168 Tarenaya hassleriana HOM05D004670 ORTHO05D008020 8.8e-66 255.0 414 37.0
HPP92_012838 Vanilla planifolia HOM05D004670 ORTHO05D008020 1.5e-65 254.2 423 36.6
RcHm_v2.0_Chr2g0131651 Rosa chinensis HOM05D004670 ORTHO05D008020 1.3e-64 251.1 261 48.3
FAN14G3835 Fragaria x ananassa HOM05D004670 ORTHO05D008020 3.7e-64 249.6 259 47.9
THA.LOC104802429 Tarenaya hassleriana HOM05D004670 ORTHO05D008020 8.3e-64 248.4 245 50.6
TPR.G23340 Trifolium pratense HOM05D004670 ORTHO05D008020 1.8e-63 247.3 427 36.3
FvH4_6g27990 Fragaria vesca HOM05D004670 ORTHO05D008020 2.4e-63 246.9 259 47.5
Medtr3g081310 Medicago truncatula HOM05D004670 ORTHO05D008020 2.7e-62 243.4 265 45.7
PSO675G7837 Papaver somniferum HOM05D004670 ORTHO05D008020 7.7e-62 241.9 426 35.2
PGR119G2157 Punica granatum HOM05D004670 ORTHO05D008020 1.7e-61 240.7 385 37.9
Lj2g0025819 Lotus japonicus HOM05D004670 ORTHO05D008020 1.1e-60 238.0 418 35.6
AT3G02650 Arabidopsis thaliana HOM05D004670 ORTHO05D008020 1.9e-60 237.3 255 46.7
SHI13694 Sapria himalayana HOM05D004670 ORTHO05D008020 7.2e-60 235.3 260 45.0
A03p33060 Brassica napus HOM05D004670 ORTHO05D008020 2.8e-59 233.4 256 47.3
BolC1t05888H Brassica oleracea HOM05D004670 ORTHO05D008020 3.6e-59 233.0 427 34.7
AUR62000265 Chenopodium quinoa HOM05D004670 ORTHO05D008020 3.6e-59 233.0 394 36.8
AL3G12030 Arabidopsis lyrata HOM05D004670 ORTHO05D008020 8.0e-59 231.9 256 46.1
Carub.0003s0177 Capsella rubella HOM05D004670 ORTHO05D008020 1.0e-58 231.5 253 45.1
Cpa.g.sc127.45 Carica papaya HOM05D004670 ORTHO05D008020 1.8e-58 230.7 413 36.3
BraA03t12476Z Brassica rapa HOM05D004670 ORTHO05D008020 5.2e-58 229.2 258 47.7
CARHR076670 Cardamine hirsuta HOM05D004670 ORTHO05D008020 6.8e-58 228.8 249 46.6
Sp3g01690 Schrenkiella parvula HOM05D004670 ORTHO05D008020 3.4e-57 226.5 254 46.5
BNapus_Darmor_BZH_scaffold_99p00180 Brassica napus HOM05D004670 ORTHO05D008020 9.8e-57 224.9 258 43.8
TPR.G9216 Trifolium pratense HOM05D004670 ORTHO05D008020 1.3e-56 224.6 361 37.1
BNapus_Darmor_BZH_scaffold_122p00150 Brassica napus HOM05D004670 ORTHO05D008020 2.8e-56 223.4 258 43.4
C03p40240 Brassica napus HOM05D004670 ORTHO05D008020 1.8e-55 220.7 246 46.7
BcaC01g04430 Brassica carinata HOM05D004670 ORTHO05D008020 3.1e-55 219.9 246 47.2
BolC3t16289H Brassica oleracea HOM05D004670 ORTHO05D008020 3.1e-55 219.9 246 47.2
BraSC246t45824Z Brassica rapa HOM05D004670 ORTHO05D008020 2.7e-54 216.9 256 43.8
Dinv17144 Davidia involucrata HOM05D004670 ORTHO05D008020 4.7e-51 206.1 255 43.1
BcaB04g19393 Brassica carinata HOM05D004670 ORTHO05D008020 1.4e-50 204.5 257 42.8
Lj6g0018960 Lotus japonicus HOM05D004670 ORTHO05D008020 1.2e-49 201.4 328 37.2
Zm00001eb144640 Zea mays HOM05D004670 ORTHO05D008020 5.9e-46 189.1 434 30.2
CSS0025547 Camellia sinensis var. sinensis HOM05D004670 ORTHO05D008020 2.6e-41 173.7 279 39.4
AUR62008837 Chenopodium quinoa HOM05D004670 ORTHO05D008020 3.4e-41 173.3 309 38.5
Thecc.09G224400 Theobroma cacao HOM05D004670 ORTHO05D008020 1.9e-39 167.5 384 31.0
SEGI_06910 Sequoiadendron giganteum HOM05D004670 ORTHO05D008020 2.0e-38 164.1 262 34.4
AUR62006613 Chenopodium quinoa HOM05D004670 ORTHO05D008020 5.0e-37 159.5 293 35.5
Cpa.g.sc35.62 Carica papaya HOM05D004670 ORTHO05D022223 1.9e-28 131.0 124 55.6
Medtr5g092030 Medicago truncatula HOM05D004670 ORTHO05D014137 4.7e-27 126.3 326 28.2
TPR.G5228 Trifolium pratense HOM05D002798 ORTHO05D003052 3.1e-26 123.6 408 26.5
Medtr5g088900 Medicago truncatula HOM05D004670 ORTHO05D014137 2.2e-24 117.5 387 25.8
VMungo1080G1842 Vigna mungo HOM05D004670 ORTHO05D014137 5.1e-21 106.3 150 44.7
AUR62044649 Chenopodium quinoa HOM05D004670 ORTHO05D008020 4.4e-17 93.2 79 58.2
Medtr8g105355 Medicago truncatula HOM05D004670 ORTHO05D014137 7.6e-17 92.4 143 38.5
Medtr8g105450 Medicago truncatula HOM05D004670 ORTHO05D014137 7.6e-17 92.4 143 38.5
VMungo1215G2433 Vigna mungo HOM05D004670 ORTHO05D014137 1.7e-16 91.3 129 43.4
TPR.G25089 Trifolium pratense HOM05D004670 ORTHO05D014137 1.9e-15 87.8 159 34.6
TPR.G5188 Trifolium pratense HOM05D004670 ORTHO05D008020 1.6e-14 84.7 168 33.3
C02p07450 Brassica napus HOM05D000424 ORTHO05D000355 3.0e-13 80.5 366 24.0
BolC2t06676H Brassica oleracea HOM05D000424 ORTHO05D000355 3.0e-13 80.5 366 24.0
Os01g0897500 Oryza sativa ssp. japonica HOM05D004670 ORTHO05D008020 5.1e-13 79.7 62 58.1
BcaC03g13436 Brassica carinata HOM05D000424 ORTHO05D000355 1.5e-12 78.2 366 23.8
Oeu022416.1 Olea europaea HOM05D004670 ORTHO05D008020 2.1e-11 74.3 54 64.8
Medtr8g080260 Medicago truncatula HOM05D004670 ORTHO05D014137 2.4e-10 70.9 191 29.8
Cpa.g.sc209.39 Carica papaya HOM05D004670 ORTHO05D022223 4.0e-10 70.1 67 52.2
Medtr7g082160 Medicago truncatula HOM05D008684 ORTHO05D010796 4.0e-10 70.1 361 23.5
Oeu039630.1 Olea europaea HOM05D004670 ORTHO05D025854 9.0e-10 68.9 42 73.8
Cpa.g.c31883 Carica papaya HOM05D004670 ORTHO05D022223 2.0e-09 67.8 71 47.9
Sp6g29030 Schrenkiella parvula HOM05D000424 ORTHO05D000355 3.4e-09 67.0 343 23.6
TPR.G10813 Trifolium pratense HOM05D004670 ORTHO05D008020 1.7e-08 64.7 65 46.2
Glyma.20G125900 Glycine max HOM05D000424 ORTHO05D000355 2.9e-08 63.9 120 29.2
Peaxi162Scf00301g00516 Petunia axillaris HOM05D030372 ORTHO05D025854 4.9e-08 63.2 272 27.6
Peaxi162Scf00301g00517 Petunia axillaris HOM05D030372 ORTHO05D025854 4.9e-08 63.2 272 27.6
Aqoxy3G03963 Aquilegia oxysepala HOM05D000424 ORTHO05D000355 6.4e-08 62.8 123 29.3
Peaxi162Scf00301g00518 Petunia axillaris HOM05D030372 ORTHO05D025854 6.4e-08 62.8 294 26.9
DCAR_026767 Daucus carota HOM05D000424 ORTHO05D000355 8.4e-08 62.4 126 31.0
Medtr3g108743 Medicago truncatula HOM05D030372 ORTHO05D025854 1.1e-07 62.0 63 44.4
Sp6g36450 Schrenkiella parvula HOM05D006596 ORTHO05D008497 1.1e-07 62.0 348 19.8
TPR.G17089 Trifolium pratense HOM05D004670 ORTHO05D014137 2.4e-07 60.8 73 42.5
ClCG01G006140 Citrullus lanatus HOM05D000424 ORTHO05D000355 3.2e-07 60.5 119 30.3
TWI79G0176 Tripterygium wilfordii HOM05D000424 ORTHO05D000355 3.2e-07 60.5 119 28.6
arahy.Tifrunner.gnm1.ann1.TA9010 Arachis hypogaea HOM05D000424 ORTHO05D000355 4.2e-07 60.1 120 30.8
CiPaw.06G013000 Carya illinoinensis HOM05D000424 ORTHO05D000355 4.2e-07 60.1 119 29.4
Hma1.2p1_0951F.1_g240750 Hydrangea macrophylla HOM05D000424 ORTHO05D000355 4.2e-07 60.1 119 29.4
Phvul.008G006600 Phaseolus vulgaris HOM05D008684 ORTHO05D010796 4.2e-07 60.1 304 21.7
Actinidia18977 Actinidia chinensis HOM05D005362 ORTHO05D006895 5.4e-07 59.7 142 28.2
CsaV3_5G028520 Cucumis sativus L. HOM05D000424 ORTHO05D000355 5.4e-07 59.7 125 28.0
Sopen09g035780 Solanum pennellii HOM05D007661 ORTHO05D009671 5.4e-07 59.7 146 23.3
Lalb_Chr25g0282721 Lupinus albus HOM05D005973 ORTHO05D007285 7.1e-07 59.3 203 25.6
Medtr5g095780 Medicago truncatula HOM05D004670 ORTHO05D008020 7.1e-07 59.3 66 40.9
Lj3P875T45 Lonicera japonica HOM05D000424 ORTHO05D000355 9.3e-07 58.9 126 27.0
Prupe.1G322900 Prunus persica HOM05D000424 ORTHO05D000355 9.3e-07 58.9 117 30.8
QL01p002086 Quercus lobata HOM05D000424 ORTHO05D000355 9.3e-07 58.9 120 28.3
Haze_11026 Corylus avellana HOM05D000424 ORTHO05D000355 1.2e-06 58.5 119 29.4
Phvul.007G037500 Phaseolus vulgaris HOM05D000424 ORTHO05D000355 1.2e-06 58.5 120 27.5
VMungo0720G0382 Vigna mungo HOM05D000424 ORTHO05D000355 2.1e-06 57.8 120 27.5
CANSAT01G3162 Cannabis sativa HOM05D000424 ORTHO05D000355 2.7e-06 57.4 126 27.0
Thhalv10012543m.g Eutrema salsugineum HOM05D006596 ORTHO05D008497 2.7e-06 57.4 214 26.2
Atru.chr11.408 Acer truncatum HOM05D000424 ORTHO05D000355 3.5e-06 57.0 126 27.8
arahy.Tifrunner.gnm1.ann1.P9G8D9 Arachis hypogaea HOM05D000424 ORTHO05D000355 3.5e-06 57.0 120 30.0
Cfa008586 Carpinus fangiana HOM05D000424 ORTHO05D000355 3.5e-06 57.0 119 29.4
PGR119G1028 Punica granatum HOM05D000424 ORTHO05D000355 3.5e-06 57.0 138 25.4
Actinidia33408 Actinidia chinensis HOM05D000424 ORTHO05D000355 4.6e-06 56.6 119 28.6
Lalb_Chr10g0091291 Lupinus albus HOM05D008684 ORTHO05D010796 4.6e-06 56.6 291 20.6
BraA02t05256Z Brassica rapa HOM05D000424 ORTHO05D000355 6.0e-06 56.2 366 21.9
PGR083G2638 Punica granatum HOM05D008684 ORTHO05D010796 6.0e-06 56.2 175 26.9
RcHm_v2.0_Chr7g0215771 Rosa chinensis HOM05D006218 ORTHO05D007338 6.0e-06 56.2 197 22.3
C09p70390 Brassica napus HOM05D006596 ORTHO05D008497 7.9e-06 55.8 253 23.3
Cc03_g04090 Coffea canephora HOM05D000424 ORTHO05D000355 7.9e-06 55.8 120 27.5
Eucgr.G02199 Eucalyptus grandis HOM05D000424 ORTHO05D000355 7.9e-06 55.8 139 25.2
Manes.03G175400 Manihot esculenta HOM05D000424 ORTHO05D000355 7.9e-06 55.8 164 26.2
TPR.G29077 Trifolium pratense HOM05D008684 ORTHO05D010796 7.9e-06 55.8 367 22.1


User provided reference genes

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