Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4326 Salvia bowleyana HOM05D004843 ORTHO05D005833 2.9e-282 974.5 490 100.0
SalBow7G4166 Salvia bowleyana HOM05D004843 ORTHO05D005833 1.5e-190 669.8 518 73.6
MSTRG.12883 Avicennia marina HOM05D004843 ORTHO05D005833 2.8e-160 569.3 490 60.4
Oeu024378.1 Olea europaea HOM05D004843 ORTHO05D005833 6.1e-139 498.4 489 55.0
SGA_v2.0_scaffold70G23704 Striga asiatica HOM05D004843 ORTHO05D005833 1.5e-137 493.8 488 55.9
Nitab4.5_0007508g0020 Nicotiana tabacum HOM05D004843 ORTHO05D005833 6.0e-118 428.7 483 48.2
Migut.H01969 Erythranthe guttata HOM05D004843 ORTHO05D005833 1.1e-116 424.5 502 48.4
CAN.G765.5 Capsicum annuum HOM05D004843 ORTHO05D005833 1.7e-112 410.6 483 47.2
Solyc12g014090.2 Solanum lycopersicum HOM05D004843 ORTHO05D005833 9.2e-111 404.8 475 46.9
Sopen12g005870 Solanum pennellii HOM05D004843 ORTHO05D005833 1.6e-110 404.1 481 46.6
Oeu061997.2 Olea europaea HOM05D004843 ORTHO05D005833 2.7e-110 403.3 476 49.6
Cc05_g11520 Coffea canephora HOM05D004843 ORTHO05D005833 2.8e-107 393.3 483 47.2
Nitab4.5_0003077g0040 Nicotiana tabacum HOM05D004843 ORTHO05D005833 4.0e-106 389.4 483 45.1
Dinv20222 Davidia involucrata HOM05D004843 ORTHO05D005833 2.4e-103 380.2 461 47.9
Oeu061325.2 Olea europaea HOM05D004843 ORTHO05D005833 3.0e-101 373.2 353 55.5
Lj1C835G2 Lonicera japonica HOM05D004843 ORTHO05D005833 3.3e-100 369.8 445 46.5
Actinidia35229 Actinidia chinensis HOM05D004843 ORTHO05D005833 5.8e-97 359.0 489 41.7
TAR627G0485 Trochodendron aralioides HOM05D004843 ORTHO05D005833 5.6e-92 342.4 466 42.7
CSS0025192 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 8.1e-91 338.6 496 38.9
CiPaw.08G115600 Carya illinoinensis HOM05D004843 ORTHO05D005833 8.1e-91 338.6 489 42.1
GSVIVG01014249001 Vitis vinifera HOM05D004843 ORTHO05D005833 5.5e-87 325.9 452 43.4
Cfa019615 Carpinus fangiana HOM05D004843 ORTHO05D005833 3.0e-85 320.1 489 39.7
TWI38G0787 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 3.0e-85 320.1 454 42.5
vmacro09509 Vaccinium macrocarpon HOM05D004843 ORTHO05D005833 6.7e-85 318.9 559 37.9
Hma1.2p1_0416F.1_g148560 Hydrangea macrophylla HOM05D004843 ORTHO05D005833 3.3e-84 316.6 479 40.1
DCAR_021007 Daucus carota HOM05D004843 ORTHO05D005833 3.7e-83 313.2 489 40.1
Oeu018948.1 Olea europaea HOM05D004843 ORTHO05D005833 6.2e-83 312.4 307 56.7
Prupe.4G172200 Prunus persica HOM05D004843 ORTHO05D005833 4.5e-81 306.2 494 41.9
Rhsim04G0023600 Rhododendron simsii HOM05D004843 ORTHO05D005833 2.9e-80 303.5 539 37.1
QL11p026708 Quercus lobata HOM05D004843 ORTHO05D005833 4.9e-80 302.8 542 36.0
MELO3C016086.2 Cucumis melo HOM05D004843 ORTHO05D005833 4.2e-79 299.7 492 38.8
Nn1g06340 Nelumbo nucifera HOM05D004843 ORTHO05D005833 1.2e-78 298.1 423 39.7
DCAR_031588 Daucus carota HOM05D004843 ORTHO05D005833 1.0e-77 295.0 442 40.3
Lsat_1_v5_gn_5_128660 Lactuca sativa HOM05D004843 ORTHO05D005833 2.3e-77 293.9 448 40.6
Lj3g0014260 Lotus japonicus HOM05D004843 ORTHO05D005833 5.1e-77 292.7 447 39.1
Peaxi162Scf00000g02614 Petunia axillaris HOM05D004843 ORTHO05D005833 5.1e-77 292.7 473 38.7
CsaV3_4G008440 Cucumis sativus L. HOM05D004843 ORTHO05D005833 8.7e-77 292.0 419 41.5
Aqoxy4G00544 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 3.3e-76 290.0 419 39.1
Sed0025158 Sechium edule HOM05D004843 ORTHO05D005833 9.6e-76 288.5 448 40.2
Glyma.12G227600 Glycine max HOM05D004843 ORTHO05D005833 1.3e-75 288.1 445 40.2
Gorai.009G374700 Gossypium raimondii HOM05D004843 ORTHO05D005833 1.3e-75 288.1 463 38.7
Gohir.D05G347266 Gossypium hirsutum HOM05D004843 ORTHO05D005833 2.8e-75 287.0 463 38.0
Gohir.A04G036900 Gossypium hirsutum HOM05D004843 ORTHO05D005833 4.8e-75 286.2 451 39.9
Glyma.13G272600 Glycine max HOM05D004843 ORTHO05D005833 3.1e-74 283.5 445 39.6
Phvul.005G068700 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 2.2e-72 277.3 447 38.5
PGR031G2553 Punica granatum HOM05D004843 ORTHO05D005833 2.9e-72 276.9 476 36.8
Lalb_Chr25g0286141 Lupinus albus HOM05D004843 ORTHO05D005833 3.8e-72 276.6 487 38.4
Lj1g0026777 Lotus japonicus HOM05D004843 ORTHO05D005833 4.2e-71 273.1 444 38.7
Phvul.005G067200 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 6.1e-70 269.2 448 37.3
VMungo1080G1831 Vigna mungo HOM05D004843 ORTHO05D005833 6.1e-70 269.2 451 38.6
RcHm_v2.0_Chr6g0312691 Rosa chinensis HOM05D004843 ORTHO05D005833 5.1e-69 266.2 478 38.1
Duzib268G0207 Durio zibethinus HOM05D004843 ORTHO05D005833 6.7e-69 265.8 446 37.9
Psat5g240000 Pisum sativum HOM05D004843 ORTHO05D005833 6.7e-69 265.8 445 38.7
HanXRQChr10g0302381 Helianthus annuus HOM05D004843 ORTHO05D005833 1.6e-67 261.2 449 37.9
ClCG07G009890 Citrullus lanatus HOM05D004843 ORTHO05D005833 2.8e-67 260.4 486 35.4
Ciclev10019192m.g Citrus clementina HOM05D004843 ORTHO05D005833 2.8e-67 260.4 499 35.7
Eucgr.F03287 Eucalyptus grandis HOM05D004843 ORTHO05D005833 2.4e-66 257.3 486 35.6
MD03G1237200 Malus domestica HOM05D004843 ORTHO05D005833 9.0e-66 255.4 492 36.2
RcHm_v2.0_Chr5g0031851 Rosa chinensis HOM05D004843 ORTHO05D005833 1.2e-65 255.0 494 36.6
arahy.Tifrunner.gnm1.ann1.60B7R0 Arachis hypogaea HOM05D004843 ORTHO05D005833 5.9e-65 252.7 459 36.2
CiPaw.11G165700 Carya illinoinensis HOM05D004843 ORTHO05D005833 7.7e-65 252.3 504 35.7
MD10G1064700 Malus domestica HOM05D004843 ORTHO05D005833 7.7e-65 252.3 491 36.5
TPR.G29644 Trifolium pratense HOM05D004843 ORTHO05D005833 7.7e-65 252.3 484 36.8
FvH4_3g19060 Fragaria vesca HOM05D004843 ORTHO05D005833 2.9e-64 250.4 479 36.7
FAN25G1696 Fragaria x ananassa HOM05D004843 ORTHO05D005833 1.1e-63 248.4 479 36.7
arahy.Tifrunner.gnm1.ann1.G1PXE9 Arachis hypogaea HOM05D004843 ORTHO05D005833 3.2e-63 246.9 460 36.1
Potri.012G106300 Populus trichocarpa HOM05D004843 ORTHO05D005833 5.1e-61 239.6 508 33.9
Cpa.g.sc131.81 Carica papaya HOM05D004843 ORTHO05D005833 2.0e-60 237.7 435 36.8
PSO210G0781 Papaver somniferum HOM05D004843 ORTHO05D005833 5.7e-60 236.1 438 36.8
PSO832G1805 Papaver somniferum HOM05D004843 ORTHO05D005833 4.8e-59 233.0 438 35.8
CDE10G0946 Ceratophyllum demersum HOM05D004843 ORTHO05D005833 4.1e-58 229.9 412 35.7
Manes.15G090500 Manihot esculenta HOM05D004843 ORTHO05D005833 6.9e-58 229.2 466 32.8
Medtr2g078390 Medicago truncatula HOM05D004843 ORTHO05D005833 4.5e-57 226.5 495 33.3
EL10Ac4g08285 Beta vulgaris HOM05D004843 ORTHO05D005833 1.7e-56 224.6 470 35.1
FAN11G0804 Fragaria x ananassa HOM05D004843 ORTHO05D005833 9.4e-55 218.8 479 34.7
AUR62036128 Chenopodium quinoa HOM05D004843 ORTHO05D005833 3.9e-53 213.4 446 34.8
CAN.G349.3 Capsicum annuum HOM05D004843 ORTHO05D005833 1.1e-50 205.3 261 47.9
ATR0165G025 Amborella trichopoda HOM05D004843 ORTHO05D005833 4.1e-50 203.4 431 32.7
CSS0012812 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 4.1e-50 203.4 292 39.0
Sc03g0010280 Simmondsia chinensis HOM05D004843 ORTHO05D005833 1.2e-49 201.8 455 34.1
Glyma.13G009900 Glycine max HOM05D004843 ORTHO05D005833 2.6e-49 200.7 383 35.2
Sabra12G0078800 Salix brachista HOM05D004843 ORTHO05D005833 5.9e-49 199.5 565 30.3
AUR62019511 Chenopodium quinoa HOM05D004843 ORTHO05D005833 1.3e-48 198.4 434 33.9
AUR62026744 Chenopodium quinoa HOM05D004843 ORTHO05D005833 2.9e-48 197.2 401 35.2
unitig_26.g10042 Utricularia gibba HOM05D004843 ORTHO05D005833 1.5e-47 194.9 299 43.1
Ca_15018_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 4.2e-47 193.4 371 34.5
THA.LOC104798752 Tarenaya hassleriana HOM05D004843 ORTHO05D005833 1.8e-45 188.0 459 32.7
Sp1g39780 Schrenkiella parvula HOM05D004843 ORTHO05D005833 3.1e-42 177.2 446 30.9
Os06g0244100 Oryza sativa ssp. japonica HOM05D004843 ORTHO05D005833 9.1e-42 175.6 410 33.2
C06p14590 Brassica napus HOM05D004843 ORTHO05D005833 5.9e-41 172.9 448 31.5
Aa31LG6G6390 Aethionema arabicum HOM05D000944 ORTHO05D003581 1.0e-40 172.2 487 30.4
BcaC08g44060 Brassica carinata HOM05D004843 ORTHO05D005833 3.8e-40 170.2 448 30.8
BolC6t36637H Brassica oleracea HOM05D004843 ORTHO05D005833 3.8e-40 170.2 448 30.8
BcaB02g10938 Brassica carinata HOM05D004843 ORTHO05D005833 1.9e-39 167.9 460 30.0
BraA05t20741Z Brassica rapa HOM05D004843 ORTHO05D005833 1.9e-39 167.9 452 30.8
Thhalv10011326m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 1.9e-39 167.9 444 31.5
CARHR043430 Cardamine hirsuta HOM05D004843 ORTHO05D005833 3.2e-39 167.2 439 32.3
Carub.0001s4239 Capsella rubella HOM05D004843 ORTHO05D005833 4.2e-39 166.8 441 31.1
A05p18490 Brassica napus HOM05D004843 ORTHO05D005833 1.2e-38 165.2 452 30.5
AL1G61600 Arabidopsis lyrata HOM05D004843 ORTHO05D005833 1.4e-37 161.8 460 30.0
Hund13862 Selenicereus undatus HOM05D004843 ORTHO05D005833 1.4e-37 161.8 536 27.8
Zm00001eb280030 Zea mays HOM05D004843 ORTHO05D005833 1.5e-36 158.3 423 30.5
AT1G53200 Arabidopsis thaliana HOM05D004843 ORTHO05D005833 5.7e-36 156.4 431 30.6
Haze_09370 Corylus avellana HOM05D004843 ORTHO05D005833 7.5e-36 156.0 322 32.9
Thecc.07G102300 Theobroma cacao HOM05D004843 ORTHO05D005833 7.5e-36 156.0 188 44.7
Thhalv10028227m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 2.7e-33 147.5 429 30.5
Atru.chr2.140 Acer truncatum HOM05D004843 ORTHO05D005833 3.5e-33 147.1 182 42.3
Ca_04025_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 4.5e-33 146.7 281 32.7
HPP92_010833 Vanilla planifolia HOM05D004843 ORTHO05D005833 1.0e-32 145.6 283 34.6
SEGI_17777 Sequoiadendron giganteum HOM05D004843 ORTHO05D005833 1.7e-32 144.8 399 26.8
TWI31G0686 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 2.1e-30 137.9 427 27.6
Aa31sc1038G10 Aethionema arabicum HOM05D004843 ORTHO05D005833 1.8e-29 134.8 437 29.1
HPP92_010831 Vanilla planifolia HOM05D004843 ORTHO05D005833 1.5e-28 131.7 336 30.1
ECA234G3172 Erigeron canadensis HOM05D004843 ORTHO05D005833 2.2e-27 127.9 151 45.7
Thecc.07G102200 Theobroma cacao HOM05D004843 ORTHO05D005833 1.6e-25 121.7 140 48.6
Aqoxy7G02743 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 5.0e-24 116.7 120 50.0
Oeu038157.2 Olea europaea HOM05D004843 ORTHO05D005833 2.8e-22 110.9 87 65.5
Oeu029262.1 Olea europaea HOM05D004843 ORTHO05D005833 2.6e-20 104.4 107 54.2
Oeu052598.1 Olea europaea HOM05D004843 ORTHO05D005833 7.5e-20 102.8 79 64.6
MBI02_g30880_MAGBIO Magnolia biondii HOM05D004843 ORTHO05D005833 3.7e-19 100.5 284 30.6
unitig_26.g10043 Utricularia gibba HOM05D004843 ORTHO05D005833 1.1e-18 99.0 151 40.4
BraA06t23340Z Brassica rapa HOM05D004843 ORTHO05D005833 1.5e-15 88.6 147 35.4
Pp3c12_9280 Physcomitrium patens HOM05D004843 ORTHO05D005833 1.9e-15 88.2 452 24.3
A06p01130 Brassica napus HOM05D004843 ORTHO05D005833 4.3e-15 87.0 132 36.4
SHI27676 Sapria himalayana HOM05D004843 ORTHO05D005833 2.3e-13 81.3 208 26.0
Oeu018912.1 Olea europaea HOM05D004843 ORTHO05D005833 3.1e-13 80.9 44 79.5
Atru.chr2.138 Acer truncatum HOM05D004843 ORTHO05D005833 5.2e-13 80.1 76 53.9
Thecc.07G102000 Theobroma cacao HOM05D004843 ORTHO05D005833 9.8e-12 75.9 101 42.6
BcaC08g43511 Brassica carinata HOM05D004843 ORTHO05D005833 1.1e-10 72.4 305 26.2
DCAR_032123 Daucus carota HOM05D004843 ORTHO05D005833 5.0e-08 63.5 57 49.1
BraA09t38198Z Brassica rapa HOM05D004843 ORTHO05D005833 6.6e-08 63.2 97 43.3
Aqoxy7G02744 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 8.6e-08 62.8 66 42.4
A09p55300 Brassica napus HOM05D004843 ORTHO05D005833 9.5e-07 59.3 79 45.6


User provided reference genes

Program Settings