Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4276 Salvia bowleyana HOM05D006511 ORTHO05D007567 7.6e-181 637.1 339 100.0
Migut.C01397 Erythranthe guttata HOM05D006511 ORTHO05D007567 6.0e-85 318.5 313 57.2
SGA_v2.0_scaffold118G32636 Striga asiatica HOM05D006511 ORTHO05D007567 9.9e-80 301.2 328 54.6
CSS0025861 Camellia sinensis var. sinensis HOM05D006511 ORTHO05D007567 2.7e-61 240.0 317 47.9
Dinv22148 Davidia involucrata HOM05D006511 ORTHO05D007567 6.7e-60 235.3 329 44.7
Actinidia29367 Actinidia chinensis HOM05D006511 ORTHO05D007567 4.3e-59 232.6 328 45.1
FAN19G0686 Fragaria x ananassa HOM05D006511 ORTHO05D007567 4.8e-58 229.2 330 42.7
Potri.013G095400 Populus trichocarpa HOM05D006511 ORTHO05D007567 2.2e-55 220.3 330 40.9
Thecc.08G168400 Theobroma cacao HOM05D006511 ORTHO05D007567 5.0e-55 219.2 329 41.6
CiPaw.03G012800 Carya illinoinensis HOM05D006511 ORTHO05D007567 8.5e-55 218.4 331 41.7
Manes.18G109250 Manihot esculenta HOM05D006511 ORTHO05D007567 1.4e-54 217.6 331 42.6
Sopen11g020540 Solanum pennellii HOM05D006511 ORTHO05D007567 1.9e-54 217.2 318 41.2
QL09p001374 Quercus lobata HOM05D006511 ORTHO05D007567 5.5e-54 215.7 331 42.0
TAR636G2957 Trochodendron aralioides HOM05D006511 ORTHO05D007567 1.6e-53 214.2 313 44.1
HanXRQChr04g0102481 Helianthus annuus HOM05D006511 ORTHO05D007567 4.7e-53 212.6 313 41.2
RcHm_v2.0_Chr6g0249621 Rosa chinensis HOM05D006511 ORTHO05D007567 1.0e-52 211.5 330 39.7
FvH4_2g00330 Fragaria vesca HOM05D006511 ORTHO05D007567 1.4e-52 211.1 330 40.6
FAN24G0692 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.4e-52 211.1 330 40.9
MD05G1006300 Malus domestica HOM05D006511 ORTHO05D007567 2.3e-52 210.3 318 42.8
Solyc11g045100.2 Solanum lycopersicum HOM05D006511 ORTHO05D007567 3.0e-52 209.9 318 40.6
Sabra13G0081400 Salix brachista HOM05D006511 ORTHO05D007567 5.1e-52 209.1 329 39.2
DCAR_014062 Daucus carota HOM05D006511 ORTHO05D007567 8.8e-52 208.4 330 40.3
TWI12G0802 Tripterygium wilfordii HOM05D006511 ORTHO05D007567 8.8e-52 208.4 309 42.7
BcaC05g27802 Brassica carinata HOM05D006511 ORTHO05D007567 4.4e-51 206.1 312 42.6
AT1G33500 Arabidopsis thaliana HOM05D006511 ORTHO05D007567 1.3e-50 204.5 315 42.9
HanXRQChr04g0102471 Helianthus annuus HOM05D006511 ORTHO05D007567 2.8e-50 203.4 306 40.8
BcaB03g13696 Brassica carinata HOM05D006511 ORTHO05D007567 6.3e-50 202.2 312 42.9
Carub.0001s3169 Capsella rubella HOM05D006511 ORTHO05D007567 6.3e-50 202.2 315 42.2
CARHR032940 Cardamine hirsuta HOM05D006511 ORTHO05D007567 8.2e-50 201.8 312 41.3
FAN20G0885 Fragaria x ananassa HOM05D006511 ORTHO05D007567 8.2e-50 201.8 338 38.8
Lsat_1_v5_gn_1_24541 Lactuca sativa HOM05D006511 ORTHO05D007567 2.4e-49 200.3 326 40.8
PGSC0003DMG401019059 Solanum tuberosum HOM05D006511 ORTHO05D007567 4.1e-49 199.5 301 40.5
THA.LOC104815798 Tarenaya hassleriana HOM05D006511 ORTHO05D007567 4.1e-49 199.5 311 41.2
Sed0008597 Sechium edule HOM05D006511 ORTHO05D007567 5.3e-49 199.1 331 39.3
Hund17299 Selenicereus undatus HOM05D006511 ORTHO05D007567 7.0e-49 198.7 321 38.9
ECA247G1184 Erigeron canadensis HOM05D006511 ORTHO05D007567 9.1e-49 198.4 320 40.0
ClCG11G008290 Citrullus lanatus HOM05D006511 ORTHO05D007567 2.0e-48 197.2 362 38.7
Sp1g28980 Schrenkiella parvula HOM05D006511 ORTHO05D007567 2.6e-48 196.8 314 41.1
Gorai.004G265800 Gossypium raimondii HOM05D006511 ORTHO05D007567 5.9e-48 195.7 330 39.7
Gohir.D08G249200 Gossypium hirsutum HOM05D006511 ORTHO05D007567 7.7e-48 195.3 330 39.4
BraA05t21311Z Brassica rapa HOM05D006511 ORTHO05D007567 1.0e-47 194.9 327 41.0
Phvul.011G215700 Phaseolus vulgaris HOM05D006511 ORTHO05D007567 1.7e-47 194.1 331 38.4
Sc01g0000050 Simmondsia chinensis HOM05D006511 ORTHO05D007567 1.7e-47 194.1 325 38.5
BolC5t32531H Brassica oleracea HOM05D006511 ORTHO05D007567 5.0e-47 192.6 337 39.5
C05p38000 Brassica napus HOM05D006511 ORTHO05D007567 6.5e-47 192.2 337 39.5
PSO384G4286 Papaver somniferum HOM05D006511 ORTHO05D007567 6.5e-47 192.2 323 39.3
MSTRG.1607 Avicennia marina HOM05D006511 ORTHO05D007567 8.5e-47 191.8 177 60.5
Prupe.8G003600 Prunus persica HOM05D006511 ORTHO05D007567 1.9e-46 190.7 307 41.4
CANSAT56G0749 Cannabis sativa HOM05D006511 ORTHO05D007567 2.1e-45 187.2 330 39.1
Rhsim02G0172300 Rhododendron simsii HOM05D006511 ORTHO05D007567 3.6e-45 186.4 317 40.4
VMungo1127G0740 Vigna mungo HOM05D006511 ORTHO05D007567 3.6e-45 186.4 373 35.7
Psat7g227400 Pisum sativum HOM05D006511 ORTHO05D007567 3.0e-44 183.3 329 33.7
Cfa008039 Carpinus fangiana HOM05D006511 ORTHO05D007567 8.8e-44 181.8 330 37.9
Nn5g27238 Nelumbo nucifera HOM05D006511 ORTHO05D007567 1.1e-43 181.4 334 37.1
unitig_749.g13868 Utricularia gibba HOM05D006511 ORTHO05D007567 1.7e-42 177.6 310 39.7
Aa31LG6G7970 Aethionema arabicum HOM05D006511 ORTHO05D007567 2.2e-42 177.2 342 38.0
Gohir.A08G228900 Gossypium hirsutum HOM05D006511 ORTHO05D007567 4.8e-42 176.0 313 38.0
TPR.G34175 Trifolium pratense HOM05D006511 ORTHO05D007567 1.6e-40 171.0 336 34.2
Glyma.12G241400 Glycine max HOM05D006511 ORTHO05D007567 5.9e-40 169.1 313 37.1
arahy.Tifrunner.gnm1.ann1.HN79E8 Arachis hypogaea HOM05D006511 ORTHO05D007567 1.1e-38 164.9 381 33.1
MELO3C008102.2 Cucumis melo HOM05D006511 ORTHO05D007567 9.4e-38 161.8 330 35.5
Lj3g0014137 Lotus japonicus HOM05D006511 ORTHO05D007567 1.2e-37 161.4 325 34.2
AUR62038542 Chenopodium quinoa HOM05D006511 ORTHO05D007567 2.1e-37 160.6 301 36.9
MBI15_g27824_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 6.1e-37 159.1 316 34.5
Haze_13990 Corylus avellana HOM05D006511 ORTHO05D007567 1.5e-35 154.5 315 36.2
CsaV3_2G033310 Cucumis sativus L. HOM05D006511 ORTHO05D007567 7.5e-35 152.1 317 34.4
Thhalv10008295m.g Eutrema salsugineum HOM05D006511 ORTHO05D007567 2.8e-34 150.2 354 34.5
MBI15_g27821_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 6.3e-34 149.1 316 33.2
Ca_13616_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 4.1e-33 146.4 332 32.8
Ca_30187_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 4.1e-33 146.4 332 32.8
Cc10_g16070 Coffea canephora HOM05D006511 ORTHO05D007567 5.0e-31 139.4 244 38.5
Hma1.2p1_1405F.1_g281380 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 5.0e-31 139.4 189 43.9
Peaxi162Scf00078g01026 Petunia axillaris HOM05D006511 ORTHO05D007567 5.5e-30 136.0 318 30.5
EL10Ac1g01283 Beta vulgaris HOM05D006511 ORTHO05D007567 9.4e-30 135.2 311 35.0
FvH4_2g04930 Fragaria vesca HOM05D006511 ORTHO05D007567 4.7e-29 132.9 272 35.3
HPP92_003819 Vanilla planifolia HOM05D006511 ORTHO05D007567 6.1e-29 132.5 340 30.9
FAN24G3334 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.4e-28 131.3 276 34.8
PGR004G0115 Punica granatum HOM05D006511 ORTHO05D007567 1.4e-28 131.3 278 32.4
Ah.13g067720 Amaranthus hybridus HOM05D006511 ORTHO05D007567 8.8e-28 128.6 286 33.6
AL1G47890 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 3.4e-27 126.7 178 46.1
FAN20G1821 Fragaria x ananassa HOM05D006511 ORTHO05D007567 3.4e-27 126.7 255 35.3
CDE10G1127 Ceratophyllum demersum HOM05D006511 ORTHO05D007567 5.7e-27 125.9 308 31.5
COL.COLO4_05796 Corchorus olitorius HOM05D006511 ORTHO05D007567 2.8e-26 123.6 341 32.8
Aqoxy6G00041 Aquilegia oxysepala HOM05D006511 ORTHO05D007567 4.8e-26 122.9 312 32.1
COL.COLO4_05044 Corchorus olitorius HOM05D006511 ORTHO05D007567 1.4e-25 121.3 257 36.2
Atru.chr13.2578 Acer truncatum HOM05D006511 ORTHO05D007567 1.8e-25 120.9 310 31.0
Nitab4.5_0001489g0030 Nicotiana tabacum HOM05D006511 ORTHO05D007567 2.4e-25 120.6 298 31.2
AUR62013391 Chenopodium quinoa HOM05D006511 ORTHO05D007567 1.7e-23 114.4 272 31.6
Sc01g0000180 Simmondsia chinensis HOM05D006511 ORTHO05D007567 3.8e-23 113.2 176 40.3
Ciclev10023919m.g Citrus clementina HOM05D006511 ORTHO05D007567 6.6e-23 112.5 190 41.1
Eucgr.F04079 Eucalyptus grandis HOM05D006511 ORTHO05D007567 2.5e-22 110.5 181 39.8
Lj8A308G12 Lonicera japonica HOM05D006511 ORTHO05D007567 1.6e-21 107.8 292 31.2
arahy.Tifrunner.gnm1.ann1.VJ45CS Arachis hypogaea HOM05D006511 ORTHO05D007567 2.1e-21 107.5 176 38.6
ATR1204G001 Amborella trichopoda HOM05D006511 ORTHO05D007567 2.3e-20 104.0 191 36.1
Medtr1g067720 Medicago truncatula HOM05D006511 ORTHO05D007567 6.8e-20 102.4 192 34.4
Zm00001eb028220 Zea mays HOM05D006511 ORTHO05D007567 1.5e-19 101.3 278 29.1
Haze_13992 Corylus avellana HOM05D006511 ORTHO05D007567 2.6e-19 100.5 80 62.5
AL1G48040 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 1.3e-18 98.2 98 55.1
Nitab4.5_0000009g0490 Nicotiana tabacum HOM05D006511 ORTHO05D007567 1.3e-18 98.2 313 27.5
Hma1.2p1_1476F.1_g285820 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 1.7e-18 97.8 211 33.6
Lalb_Chr19g0131901 Lupinus albus HOM05D006511 ORTHO05D007567 3.7e-18 96.7 105 44.8
Medtr1g067710 Medicago truncatula HOM05D006511 ORTHO05D007567 8.3e-18 95.5 119 39.5
Eucgr.F04078 Eucalyptus grandis HOM05D006511 ORTHO05D007567 7.0e-17 92.4 120 45.0
arahy.Tifrunner.gnm1.ann1.FKD4F4 Arachis hypogaea HOM05D006511 ORTHO05D007567 2.7e-16 90.5 112 43.8
Cpa.g.sc142.8 Carica papaya HOM05D006511 ORTHO05D007567 5.0e-15 86.3 196 32.1
Sc01g0000190 Simmondsia chinensis HOM05D006511 ORTHO05D007567 5.0e-15 86.3 102 44.1
Os08g0320300 Oryza sativa ssp. japonica HOM05D006511 ORTHO05D007567 1.9e-14 84.3 199 31.2
Nn5g27242 Nelumbo nucifera HOM05D006511 ORTHO05D007567 4.0e-12 76.6 85 48.2
Ciclev10023084m.g Citrus clementina HOM05D006511 ORTHO05D007567 8.9e-12 75.5 99 46.5
vmacro11027 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 2.0e-11 74.3 201 31.8
Hma1.2p1_1476F.1_g285810 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 5.8e-11 72.8 55 65.5
COL.COLO4_36458 Corchorus olitorius HOM05D006511 ORTHO05D007567 4.6e-08 63.2 75 41.3
Haze_13997 Corylus avellana HOM05D006511 ORTHO05D007567 6.0e-08 62.8 63 54.0
SMO137G0232 Selaginella moellendorffii HOM05D006511 ORTHO05D007567 1.0e-07 62.0 89 36.0
Lalb_Chr19g0131881 Lupinus albus HOM05D006511 ORTHO05D007567 1.3e-07 61.6 45 66.7
Lsat_1_v5_gn_0_19000 Lactuca sativa HOM05D006511 ORTHO05D007567 1.7e-07 61.2 90 41.1
Lalb_Chr19g0131891 Lupinus albus HOM05D006511 ORTHO05D007567 3.9e-07 60.1 159 30.2
Haze_13999 Corylus avellana HOM05D006511 ORTHO05D007567 5.0e-07 59.7 55 63.6
vmacro11028 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 6.6e-07 59.3 56 57.1


User provided reference genes

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