Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 1.1e-212 743.0 377 100.0
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 4.4e-169 598.2 380 79.5
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 7.5e-169 597.4 380 80.3
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 2.9e-165 585.5 377 79.0
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 1.5e-161 573.2 379 76.0
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 2.3e-146 522.7 366 72.1
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 7.5e-145 517.7 378 71.2
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 1.7e-144 516.5 381 71.7
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 1.7e-144 516.5 381 71.7
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 2.2e-144 516.2 378 70.6
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 1.9e-143 513.1 382 70.2
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 2.0e-142 509.6 372 70.4
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 4.6e-142 508.4 377 70.8
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 1.7e-141 506.5 377 69.0
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 3.0e-141 505.8 363 70.2
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 8.6e-141 504.2 377 70.3
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 1.5e-140 503.4 376 68.1
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 2.5e-140 502.7 380 68.9
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 2.5e-140 502.7 375 69.3
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 3.3e-140 502.3 363 69.4
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 4.3e-140 501.9 374 69.3
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 7.3e-140 501.1 377 69.0
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 2.8e-139 499.2 336 73.2
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 3.6e-139 498.8 379 67.8
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 1.1e-138 497.3 382 68.1
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 2.3e-138 496.1 381 68.8
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 3.1e-138 495.7 379 66.0
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 3.1e-138 495.7 375 68.3
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 6.8e-138 494.6 382 66.8
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 8.9e-138 494.2 315 75.2
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 1.2e-137 493.8 379 66.2
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 7.5e-137 491.1 374 67.4
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 1.3e-136 490.3 373 68.1
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 1.3e-136 490.3 363 67.8
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 1.7e-136 490.0 379 67.5
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 1.7e-136 490.0 374 66.8
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 2.9e-136 489.2 375 67.7
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 2.9e-136 489.2 371 66.8
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 3.7e-136 488.8 345 69.6
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 6.4e-136 488.0 378 67.5
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 1.1e-135 487.3 371 66.3
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 1.4e-135 486.9 374 65.8
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 1.9e-135 486.5 382 65.4
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 2.4e-135 486.1 371 65.5
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 3.2e-135 485.7 379 64.9
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 7.1e-135 484.6 381 67.7
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 1.2e-134 483.8 377 65.5
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 1.6e-134 483.4 371 66.3
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 3.5e-134 482.3 378 66.7
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 4.6e-134 481.9 385 65.5
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.3e-133 480.3 321 72.3
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 1.3e-133 480.3 378 65.3
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 2.3e-133 479.6 321 72.3
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 1.5e-132 476.9 349 67.6
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 8.1e-131 471.1 374 64.2
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 4.0e-130 468.8 375 63.2
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 1.2e-129 467.2 284 78.5
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 1.5e-129 466.8 363 65.6
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 2.0e-129 466.5 315 70.8
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 5.8e-129 464.9 365 64.9
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 5.8e-129 464.9 324 69.8
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 7.6e-129 464.5 375 63.2
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 7.6e-129 464.5 383 63.7
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 1.7e-128 463.4 379 64.6
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 1.7e-128 463.4 340 67.4
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 3.7e-128 462.2 356 64.9
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 6.4e-128 461.5 359 64.6
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 8.4e-128 461.1 363 66.1
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 8.4e-128 461.1 304 74.7
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 2.4e-127 459.5 370 65.4
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 5.4e-127 458.4 379 65.2
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 5.4e-127 458.4 424 59.2
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 7.1e-127 458.0 373 62.2
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 2.1e-126 456.4 378 62.4
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 2.7e-126 456.1 359 64.1
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 6.0e-126 454.9 382 62.0
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 6.0e-126 454.9 283 77.0
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 1.7e-125 453.4 371 63.3
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 1.7e-125 453.4 371 63.3
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 2.3e-125 453.0 371 63.3
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 9.6e-124 447.6 314 68.5
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.2e-123 447.2 282 75.9
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 5.2e-122 441.8 346 65.0
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 6.8e-122 441.4 394 59.1
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 8.9e-122 441.0 335 67.2
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 3.8e-120 435.6 372 58.9
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 1.1e-119 434.1 411 56.4
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 4.2e-119 432.2 370 62.2
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 2.9e-112 409.5 477 50.7
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 8.4e-104 381.3 272 69.1
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 2.1e-102 376.7 377 54.9
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 6.0e-102 375.2 251 72.5
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 6.7e-101 371.7 313 57.5
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 1.3e-96 357.5 207 86.0
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 3.8e-96 355.9 351 52.7
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 3.8e-96 355.9 351 52.7
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 3.5e-94 349.4 238 73.5
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 4.8e-91 339.0 276 59.8
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 7.9e-86 321.6 247 63.2
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.3e-83 314.3 265 58.5
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 2.2e-51 207.2 170 55.3
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 2.2e-43 180.6 196 45.9
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 8.6e-40 168.7 155 55.5
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 3.0e-37 160.2 125 64.0
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 1.3e-35 154.8 167 52.1
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 4.9e-27 126.3 84 78.6
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 9.2e-26 122.1 108 50.9
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 2.0e-25 120.9 144 44.4
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 1.7e-24 117.9 130 46.9
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 4.9e-19 99.8 132 44.7
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 8.3e-19 99.0 84 59.5
A07p29310 Brassica napus HOM05D006971 ORTHO05D041645 6.6e-08 62.8 48 66.7
BraA07t30570Z Brassica rapa HOM05D006971 ORTHO05D041645 6.6e-08 62.8 48 66.7
Pp3c23_2190 Physcomitrium patens HOM05D004123 ORTHO05D004768 3.6e-06 57.0 47 61.7


User provided reference genes

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