Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4183 Salvia bowleyana HOM05D001393 ORTHO05D007477 0.0e+00 1553.1 806 100.0
SalBow6G6124 Salvia bowleyana HOM05D001393 ORTHO05D007477 6.6e-311 1070.5 737 81.3
MSTRG.5028 Avicennia marina HOM05D001393 ORTHO05D007477 3.9e-183 646.0 884 47.6
MSTRG.28063 Avicennia marina HOM05D001393 ORTHO05D007477 9.3e-177 624.8 869 47.5
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 7.9e-160 568.5 822 47.8
SGA_v2.0_scaffold5G02964 Striga asiatica HOM05D001393 ORTHO05D007477 9.7e-158 561.6 848 44.7
Oeu049495.1 Olea europaea HOM05D001393 ORTHO05D007477 4.4e-142 509.6 899 41.8
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 9.2e-108 395.6 954 36.7
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 1.7e-106 391.3 861 36.4
Actinidia21547 Actinidia chinensis HOM05D001393 ORTHO05D007477 1.2e-104 385.2 825 38.2
CAN.G1513.5 Capsicum annuum HOM05D001393 ORTHO05D007477 3.6e-104 383.6 841 37.7
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 2.3e-103 380.9 858 36.4
Solyc11g007060.2 Solanum lycopersicum HOM05D001393 ORTHO05D007477 7.6e-102 375.9 858 36.4
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 1.4e-100 371.7 774 38.2
vmacro13675 Vaccinium macrocarpon HOM05D001393 ORTHO05D007477 2.3e-98 364.4 853 36.3
CSS0038724 Camellia sinensis var. sinensis HOM05D001393 ORTHO05D007477 5.6e-97 359.8 671 38.0
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 6.2e-96 356.3 481 45.1
Cfa010777 Carpinus fangiana HOM05D001393 ORTHO05D007477 8.1e-96 355.9 844 36.0
CiPaw.14G000700 Carya illinoinensis HOM05D001393 ORTHO05D007477 2.6e-94 350.9 808 35.3
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 9.9e-94 349.0 810 36.3
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 4.9e-93 346.7 784 36.2
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 6.4e-93 346.3 831 36.2
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 8.4e-93 345.9 814 34.5
TWI73G0713 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 1.9e-92 344.7 516 43.8
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 5.4e-92 343.2 768 36.6
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 7.8e-91 339.3 791 34.9
DCAR_029678 Daucus carota HOM05D001393 ORTHO05D007477 1.3e-90 338.6 698 38.5
Duzib133G0545 Durio zibethinus HOM05D001393 ORTHO05D007477 3.9e-90 337.0 808 35.4
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 5.1e-90 336.7 798 34.7
Nitab4.5_0000001g0230 Nicotiana tabacum HOM05D001393 ORTHO05D007477 5.1e-90 336.7 804 35.0
Nitab4.5_0001761g0330 Nicotiana tabacum HOM05D001393 ORTHO05D007477 1.9e-89 334.7 829 34.4
COL.COLO4_04862 Corchorus olitorius HOM05D001393 ORTHO05D007477 1.3e-88 332.0 791 34.6
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 4.8e-88 330.1 798 34.6
QL04p008271 Quercus lobata HOM05D001393 ORTHO05D007477 4.0e-87 327.0 807 34.4
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 9.0e-87 325.9 810 34.9
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 6.4e-85 319.7 790 34.3
unitig_578.g16692 Utricularia gibba HOM05D001393 ORTHO05D007477 1.1e-84 318.9 817 34.9
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 2.4e-84 317.8 915 33.2
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 3.2e-84 317.4 837 32.9
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 4.2e-84 317.0 787 34.7
TWI09G0484 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 7.1e-84 316.2 530 40.4
Cpa.g.sc125.11 Carica papaya HOM05D001393 ORTHO05D007477 2.1e-83 314.7 777 34.1
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 2.1e-83 314.7 794 34.8
TAR623G0231 Trochodendron aralioides HOM05D001393 ORTHO05D007477 7.9e-83 312.8 543 40.9
Gorai.004G171900 Gossypium raimondii HOM05D001393 ORTHO05D007477 3.0e-82 310.8 798 34.8
Potri.009G060000 Populus trichocarpa HOM05D001393 ORTHO05D007477 3.0e-82 310.8 513 39.2
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 5.1e-82 310.1 775 34.7
Peaxi162Scf00152g01336 Petunia axillaris HOM05D001393 ORTHO05D007477 5.1e-82 310.1 906 31.8
FAN03G1765 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.1e-81 308.9 813 33.5
Sabra16G0162900 Salix brachista HOM05D001393 ORTHO05D007477 7.4e-81 306.2 846 32.5
CANSAT80G1121 Cannabis sativa HOM05D001393 ORTHO05D007477 8.1e-80 302.8 817 33.0
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 8.1e-80 302.8 777 34.9
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 2.4e-79 301.2 800 32.0
Sed0015725 Sechium edule HOM05D001393 ORTHO05D007477 2.0e-78 298.1 795 32.3
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 1.2e-75 288.9 805 31.9
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 2.7e-75 287.7 712 32.6
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea HOM05D001393 ORTHO05D007477 4.6e-75 287.0 829 33.8
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 3.9e-74 283.9 599 36.7
Sc11g0009120 Simmondsia chinensis HOM05D001393 ORTHO05D007477 3.9e-74 283.9 778 31.9
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea HOM05D001393 ORTHO05D007477 6.7e-74 283.1 828 33.7
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 8.7e-74 282.7 885 30.8
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 1.1e-73 282.3 807 30.6
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 7.4e-73 279.6 819 31.4
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 2.1e-72 278.1 774 32.7
Aqoxy1G00280 Aquilegia oxysepala HOM05D001393 ORTHO05D007477 2.8e-72 277.7 586 35.8
Dinv43433 Davidia involucrata HOM05D001393 ORTHO05D007477 5.3e-71 273.5 266 57.1
HanXRQChr09g0251311 Helianthus annuus HOM05D001393 ORTHO05D007477 7.6e-70 269.6 726 33.1
EL10Ac2g04339 Beta vulgaris HOM05D001393 ORTHO05D007477 1.3e-69 268.9 790 31.0
MELO3C023559.2 Cucumis melo HOM05D001393 ORTHO05D007477 1.7e-69 268.5 825 30.3
Glyma.12G007700 Glycine max HOM05D001393 ORTHO05D007477 8.4e-69 266.2 811 31.8
Lj3g0000057 Lotus japonicus HOM05D001393 ORTHO05D007477 2.1e-67 261.5 835 31.3
VMungo1127G2137 Vigna mungo HOM05D001393 ORTHO05D007477 7.9e-67 259.6 827 31.2
Ca_19581_v3 Cicer arietinum L. HOM05D001393 ORTHO05D007477 3.3e-65 254.2 804 30.8
Phvul.011G009600 Phaseolus vulgaris HOM05D001393 ORTHO05D007477 3.3e-65 254.2 817 29.9
AUR62009391 Chenopodium quinoa HOM05D001393 ORTHO05D007477 1.3e-64 252.3 790 31.1
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 1.6e-64 251.9 809 30.5
Medtr4g037495 Medicago truncatula HOM05D001393 ORTHO05D007477 2.1e-64 251.5 820 29.9
PSO339G5226 Papaver somniferum HOM05D001393 ORTHO05D007477 4.8e-64 250.4 892 29.3
Lsat_1_v5_gn_1_106561 Lactuca sativa HOM05D001393 ORTHO05D007477 3.4e-62 244.2 590 35.1
PSO384G0142 Papaver somniferum HOM05D001393 ORTHO05D007477 4.5e-62 243.8 891 29.4
Hund21482 Selenicereus undatus HOM05D001393 ORTHO05D007477 5.5e-60 236.9 832 30.2
A06p39440 Brassica napus HOM05D001393 ORTHO05D007477 5.1e-58 230.3 768 30.7
BraA06t26859Z Brassica rapa HOM05D001393 ORTHO05D007477 5.1e-58 230.3 768 30.7
Aa31LG11G7400 Aethionema arabicum HOM05D001393 ORTHO05D007477 2.5e-57 228.0 670 30.9
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 1.5e-54 218.8 809 28.7
Sp2g18440 Schrenkiella parvula HOM05D001393 ORTHO05D007477 1.3e-53 215.7 801 30.5
AT5G47940 Arabidopsis thaliana HOM05D001393 ORTHO05D007477 5.0e-53 213.8 625 32.3
Carub.0008s0749 Capsella rubella HOM05D001393 ORTHO05D007477 5.0e-53 213.8 841 28.9
C07p38830 Brassica napus HOM05D001393 ORTHO05D007477 4.2e-52 210.7 818 28.7
Sabra09G0044200 Salix brachista HOM05D001393 ORTHO05D007477 1.6e-51 208.8 876 28.5
CARHR184320 Cardamine hirsuta HOM05D001393 ORTHO05D007477 2.1e-51 208.4 616 31.8
CDE05G0268 Ceratophyllum demersum HOM05D001393 ORTHO05D007477 2.7e-51 208.0 560 31.6
Thhalv10003674m.g Eutrema salsugineum HOM05D001393 ORTHO05D007477 1.8e-50 205.3 768 29.9
BolC7t44402H Brassica oleracea HOM05D001393 ORTHO05D007477 1.5e-49 202.2 812 28.4
Lj9A633T62 Lonicera japonica HOM05D001393 ORTHO05D007477 3.3e-49 201.1 608 34.0
AL8G20040 Arabidopsis lyrata HOM05D001393 ORTHO05D007477 2.2e-48 198.4 804 28.7
BcaC06g30834 Brassica carinata HOM05D001393 ORTHO05D007477 1.4e-44 185.7 608 30.6
ECA248G1228 Erigeron canadensis HOM05D001393 ORTHO05D007477 5.5e-44 183.7 512 34.2
Zm00001eb107220 Zea mays HOM05D001393 ORTHO05D007477 1.2e-43 182.6 656 27.9
HPP92_026649 Vanilla planifolia HOM05D001393 ORTHO05D007477 1.4e-42 179.1 613 30.2
Ah.10g038800 Amaranthus hybridus HOM05D001393 ORTHO05D007477 1.8e-42 178.7 631 29.2
HPP92_015712 Vanilla planifolia HOM05D001393 ORTHO05D007477 1.8e-42 178.7 613 29.7
Duzib138G1437 Durio zibethinus HOM05D001393 ORTHO05D007477 8.8e-42 176.4 580 31.7
ATR0332G069 Amborella trichopoda HOM05D001393 ORTHO05D007477 7.4e-41 173.3 611 29.3
Zm00001eb324710 Zea mays HOM05D001393 ORTHO05D007477 3.5e-38 164.5 529 29.5
Os07g0569000 Oryza sativa ssp. japonica HOM05D001393 ORTHO05D007477 8.5e-37 159.8 705 27.0
FAN10G3273 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.0e-30 138.7 155 47.7
Dinv43434 Davidia involucrata HOM05D001393 ORTHO05D007477 1.2e-14 86.3 172 36.6
Eucgr.J01288 Eucalyptus grandis HOM05D001393 ORTHO05D007477 2.0e-14 85.5 143 39.2
SEGI_29291 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 2.0e-09 68.9 417 22.1
Pp3c5_15230 Physcomitrium patens HOM05D001393 ORTHO05D007477 1.4e-07 62.8 200 28.0
SEGI_04113 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 2.4e-07 62.0 390 21.8
SEGI_08002 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 2.4e-07 62.0 390 21.8
SEGI_24281 Sequoiadendron giganteum HOM05D000890 ORTHO05D007477 4.1e-07 61.2 185 29.7


User provided reference genes

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