Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4178 Salvia bowleyana HOM05D000718 ORTHO05D007431 1.7e-268 928.7 465 100.0
SalBow7G4376 Salvia bowleyana HOM05D000718 ORTHO05D007431 1.1e-267 926.0 465 99.6
Migut.H01998 Erythranthe guttata HOM05D000718 ORTHO05D007431 1.0e-228 796.6 468 84.8
SGA_v2.0_scaffold130G34293 Striga asiatica HOM05D000718 ORTHO05D007431 1.5e-219 766.1 455 84.2
Sopen07g030690 Solanum pennellii HOM05D000718 ORTHO05D007431 8.8e-204 713.8 463 76.7
PGSC0003DMG400007071 Solanum tuberosum HOM05D000718 ORTHO05D007431 8.8e-204 713.8 463 76.7
Solyc07g062450.3 Solanum lycopersicum HOM05D000718 ORTHO05D007431 1.2e-203 713.4 463 76.5
Dinv18364 Davidia involucrata HOM05D000718 ORTHO05D007431 7.5e-203 710.7 467 76.4
Nitab4.5_0003565g0040 Nicotiana tabacum HOM05D000718 ORTHO05D007431 9.8e-203 710.3 463 76.0
Oeu025333.1 Olea europaea HOM05D000718 ORTHO05D007431 1.3e-202 709.9 461 76.4
Nitab4.5_0006953g0050 Nicotiana tabacum HOM05D000718 ORTHO05D007431 2.8e-202 708.8 463 76.2
Peaxi162Scf00111g01475 Petunia axillaris HOM05D000718 ORTHO05D007431 4.5e-200 701.4 463 75.4
Rhsim06G0207800 Rhododendron simsii HOM05D000718 ORTHO05D007431 1.7e-199 699.5 461 74.6
CAN.G375.14 Capsicum annuum HOM05D000718 ORTHO05D007431 5.5e-198 694.5 463 74.1
Lj1A829G32 Lonicera japonica HOM05D000718 ORTHO05D007431 1.2e-197 693.3 462 74.2
Actinidia12577 Actinidia chinensis HOM05D000718 ORTHO05D007431 7.5e-195 684.1 465 73.1
GSVIVG01014199001 Vitis vinifera HOM05D000718 ORTHO05D007431 1.2e-192 676.8 466 74.0
PGR031G2045 Punica granatum HOM05D000718 ORTHO05D007431 7.2e-190 667.5 467 72.4
Cc05_g11090 Coffea canephora HOM05D000718 ORTHO05D007431 9.5e-190 667.2 467 73.2
DCAR_013156 Daucus carota HOM05D000718 ORTHO05D007431 1.4e-188 663.3 465 72.0
CiPaw.11G160400 Carya illinoinensis HOM05D000718 ORTHO05D007431 8.9e-188 660.6 467 71.5
Atru.chr2.2147 Acer truncatum HOM05D000718 ORTHO05D007431 2.0e-187 659.4 466 71.9
Thecc.07G114900 Theobroma cacao HOM05D000718 ORTHO05D007431 9.8e-187 657.1 469 71.4
TWI39G0589 Tripterygium wilfordii HOM05D000718 ORTHO05D007431 9.8e-187 657.1 466 71.2
MD03G1243500 Malus domestica HOM05D000718 ORTHO05D007431 1.3e-186 656.8 464 72.2
THA.LOC104822564 Tarenaya hassleriana HOM05D000718 ORTHO05D007431 1.8e-185 652.9 467 70.2
RcHm_v2.0_Chr5g0030941 Rosa chinensis HOM05D000718 ORTHO05D007431 3.2e-185 652.1 463 70.4
CANSAT35G0289 Cannabis sativa HOM05D000718 ORTHO05D007431 7.0e-185 651.0 466 71.5
vmacro23465 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 7.0e-185 651.0 479 68.9
Prupe.4G164800 Prunus persica HOM05D000718 ORTHO05D007431 9.2e-185 650.6 466 70.4
Lj3g0001987 Lotus japonicus HOM05D000718 ORTHO05D007431 1.6e-184 649.8 472 70.3
EL10Ac4g08344 Beta vulgaris HOM05D000718 ORTHO05D007431 1.0e-183 647.1 466 70.6
Ah.04g164270 Amaranthus hybridus HOM05D000718 ORTHO05D007431 2.3e-183 646.0 470 69.6
FvH4_3g18310 Fragaria vesca HOM05D000718 ORTHO05D007431 3.9e-183 645.2 463 69.8
Haze_09324 Corylus avellana HOM05D000718 ORTHO05D007431 8.6e-183 644.0 487 69.8
Eucgr.K01884 Eucalyptus grandis HOM05D000718 ORTHO05D007431 1.9e-182 642.9 462 69.9
Potri.001G390700 Populus trichocarpa HOM05D000718 ORTHO05D007431 5.6e-182 641.3 467 69.8
Duzib187G1570 Durio zibethinus HOM05D000718 ORTHO05D007431 2.1e-181 639.4 469 69.3
Cfa019567 Carpinus fangiana HOM05D000718 ORTHO05D007431 6.1e-181 637.9 454 72.5
HanXRQChr15g0476211 Helianthus annuus HOM05D000718 ORTHO05D007431 6.1e-181 637.9 464 69.6
Hund02254 Selenicereus undatus HOM05D000718 ORTHO05D007431 8.0e-181 637.5 467 70.9
Ca_12194_v3 Cicer arietinum L. HOM05D000718 ORTHO05D007431 1.0e-180 637.1 468 68.4
Sed0007644 Sechium edule HOM05D000718 ORTHO05D007431 1.0e-180 637.1 461 69.4
TPR.G16488 Trifolium pratense HOM05D000718 ORTHO05D007431 1.4e-180 636.7 469 68.7
AL3G27230 Arabidopsis lyrata HOM05D000718 ORTHO05D007431 2.3e-180 636.0 465 69.5
FAN25G1161 Fragaria x ananassa HOM05D000718 ORTHO05D007431 2.3e-180 636.0 464 68.5
arahy.Tifrunner.gnm1.ann1.6IHZ0U Arachis hypogaea HOM05D000718 ORTHO05D007431 3.1e-180 635.6 473 67.7
FAN16G1727 Fragaria x ananassa HOM05D000718 ORTHO05D007431 4.0e-180 635.2 472 68.2
CARHR089850 Cardamine hirsuta HOM05D000718 ORTHO05D007431 6.8e-180 634.4 465 69.0
Gohir.A01G054400 Gossypium hirsutum HOM05D000718 ORTHO05D007431 8.9e-180 634.0 469 68.4
Carub.0003s1457 Capsella rubella HOM05D000718 ORTHO05D007431 1.5e-179 633.3 465 68.8
MELO3C025639.2 Cucumis melo HOM05D000718 ORTHO05D007431 2.0e-179 632.9 470 69.8
Thhalv10020708m.g Eutrema salsugineum HOM05D000718 ORTHO05D007431 2.0e-179 632.9 465 69.2
Gohir.D01G042724 Gossypium hirsutum HOM05D000718 ORTHO05D007431 2.6e-179 632.5 469 68.0
Gorai.002G054700 Gossypium raimondii HOM05D000718 ORTHO05D007431 3.4e-179 632.1 469 68.0
QL08p026242 Quercus lobata HOM05D000718 ORTHO05D007431 5.8e-179 631.3 476 68.3
COL.COLO4_17547 Corchorus olitorius HOM05D000718 ORTHO05D007431 1.7e-178 629.8 484 67.4
AT3G14910 Arabidopsis thaliana HOM05D000718 ORTHO05D007431 2.2e-178 629.4 465 68.8
Lsat_1_v5_gn_9_99900 Lactuca sativa HOM05D000718 ORTHO05D007431 2.9e-178 629.0 461 68.8
ClCG11G017460 Citrullus lanatus HOM05D000718 ORTHO05D007431 4.9e-178 628.2 465 69.2
AUR62042779 Chenopodium quinoa HOM05D000718 ORTHO05D007431 6.4e-178 627.9 480 67.1
Psat0s1037g0040 Pisum sativum HOM05D000718 ORTHO05D007431 6.4e-178 627.9 470 68.9
FAN11G0057 Fragaria x ananassa HOM05D000718 ORTHO05D007431 1.1e-177 627.1 463 68.7
Lalb_Chr01g0006831 Lupinus albus HOM05D000718 ORTHO05D007431 1.1e-177 627.1 466 68.0
arahy.Tifrunner.gnm1.ann1.STN4DM Arachis hypogaea HOM05D000718 ORTHO05D007431 1.4e-177 626.7 469 67.4
Glyma.12G157600 Glycine max HOM05D000718 ORTHO05D007431 5.4e-177 624.8 465 67.7
CSS0021542 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 7.0e-177 624.4 466 68.9
BolC5t33913H Brassica oleracea HOM05D000718 ORTHO05D007431 1.2e-176 623.6 465 68.8
Aa31LG8G2120 Aethionema arabicum HOM05D000718 ORTHO05D007431 6.0e-176 621.3 461 68.1
ECA240G1747 Erigeron canadensis HOM05D000718 ORTHO05D007431 7.8e-176 620.9 463 67.8
Glyma.06G228900 Glycine max HOM05D000718 ORTHO05D007431 6.6e-175 617.8 470 67.9
BcaB06g25332 Brassica carinata HOM05D000718 ORTHO05D007431 8.6e-175 617.5 458 68.6
A05p34500 Brassica napus HOM05D000718 ORTHO05D007431 8.6e-175 617.5 461 68.5
BraA05t22270Z Brassica rapa HOM05D000718 ORTHO05D007431 8.6e-175 617.5 461 68.5
unitig_52.g17395 Utricularia gibba HOM05D000718 ORTHO05D007431 1.5e-174 616.7 465 68.6
Medtr8g464030 Medicago truncatula HOM05D000718 ORTHO05D007431 9.5e-174 614.0 507 63.3
Phvul.011G162200 Phaseolus vulgaris HOM05D000718 ORTHO05D007431 8.9e-172 607.4 470 66.2
PSO782G3001 Papaver somniferum HOM05D000718 ORTHO05D007431 1.2e-171 607.1 461 65.9
PSO478G1672 Papaver somniferum HOM05D000718 ORTHO05D007431 1.7e-170 603.2 461 65.7
Lalb_Chr03g0031171 Lupinus albus HOM05D000718 ORTHO05D007431 2.4e-169 599.4 464 65.7
MBI07_g09566_MAGBIO Magnolia biondii HOM05D000718 ORTHO05D007431 6.0e-168 594.7 513 61.6
Nn1g04439 Nelumbo nucifera HOM05D000718 ORTHO05D007431 3.9e-167 592.0 434 69.4
Aqoxy4G00321 Aquilegia oxysepala HOM05D000718 ORTHO05D007431 6.6e-167 591.3 469 64.2
C05p52240 Brassica napus HOM05D000718 ORTHO05D007431 1.2e-165 587.0 450 67.1
CSS0043856 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 2.6e-163 579.3 463 64.8
CDE04G1093 Ceratophyllum demersum HOM05D000718 ORTHO05D007431 1.3e-162 577.0 460 62.4
Nn1g09174 Nelumbo nucifera HOM05D000718 ORTHO05D007431 3.2e-161 572.4 465 63.7
Manes.03G101200 Manihot esculenta HOM05D000718 ORTHO05D007431 1.2e-160 570.5 407 69.5
vmacro11939 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.2e-157 560.5 483 61.3
FAN21G3716 Fragaria x ananassa HOM05D000718 ORTHO05D007431 6.8e-156 554.7 404 68.6
ATR0602G196 Amborella trichopoda HOM05D000718 ORTHO05D007431 3.4e-155 552.4 466 61.4
CSS0014195 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 1.1e-150 537.3 466 62.0
VMungo1127G0879 Vigna mungo HOM05D000718 ORTHO05D007431 2.8e-149 532.7 418 64.8
AUR62019575 Chenopodium quinoa HOM05D000718 ORTHO05D007431 1.5e-147 526.9 432 63.4
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 5.8e-147 525.0 417 65.7
HPP92_023429 Vanilla planifolia HOM05D000718 ORTHO05D007431 4.3e-142 508.8 468 57.9
Os09g0315800 Oryza sativa ssp. japonica HOM05D000718 ORTHO05D007431 2.0e-139 500.0 480 56.5
Ciclev10021305m.g Citrus clementina HOM05D000718 ORTHO05D007431 4.5e-131 472.2 309 78.6
Zm00001eb309730 Zea mays HOM05D000718 ORTHO05D007431 7.4e-126 454.9 340 65.0
SEGI_16322 Sequoiadendron giganteum HOM05D000718 ORTHO05D007431 2.4e-124 449.9 453 51.2
Sc16g0007570 Simmondsia chinensis HOM05D000718 ORTHO05D007431 7.4e-118 428.3 299 73.2
MD11G1263600 Malus domestica HOM05D000718 ORTHO05D007431 1.3e-114 417.5 281 72.6
CsaV3_4G033110 Cucumis sativus L. HOM05D000718 ORTHO05D007431 4.1e-108 396.0 309 66.3
vmacro11937 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 7.4e-102 375.2 334 60.8
vmacro23384 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.2e-99 367.9 347 57.3
MSTRG.14233 Avicennia marina HOM05D000718 ORTHO05D007431 1.1e-97 361.3 232 76.3
SHI27609 Sapria himalayana HOM05D000718 ORTHO05D007431 3.6e-96 356.3 414 47.6
AagrBONN_evm.TU.Sc2ySwM_228.1801 Anthoceros agrestis HOM05D000718 ORTHO05D007431 4.7e-96 355.9 463 43.0
Pp3c4_25540 Physcomitrium patens HOM05D000718 ORTHO05D007431 1.9e-89 334.0 474 41.4
BcaB06g29518 Brassica carinata HOM05D000718 ORTHO05D002712 8.8e-87 325.1 462 45.5
SMO367G0522 Selaginella moellendorffii HOM05D000718 ORTHO05D007431 2.0e-86 323.9 462 42.6
Thecc.07G114700 Theobroma cacao HOM05D000718 ORTHO05D007431 2.4e-84 317.0 387 50.4
Mapoly0061s0004 Marchantia polymorpha HOM05D000718 ORTHO05D007431 2.7e-83 313.5 466 39.9
vmacro11938 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.8e-79 300.8 303 54.1
Sp3g13120 Schrenkiella parvula HOM05D000718 ORTHO05D007431 5.4e-76 289.3 233 59.2
Psat4g090840 Pisum sativum HOM05D000718 ORTHO05D007431 2.3e-74 283.9 269 60.6
Psat3g077000 Pisum sativum HOM05D000718 ORTHO05D007431 5.8e-62 242.7 263 49.0
Sc16g0007580 Simmondsia chinensis HOM05D000718 ORTHO05D007431 1.3e-53 214.9 170 60.0
Thecc.07G115900 Theobroma cacao HOM05D000718 ORTHO05D007431 1.3e-50 204.9 173 62.4
Hund02252 Selenicereus undatus HOM05D000718 ORTHO05D007431 3.2e-44 183.7 161 65.8
PGSC0003DMG400011947 Solanum tuberosum HOM05D000718 ORTHO05D007431 1.6e-40 171.4 125 70.4
MD11G1263700 Malus domestica HOM05D000718 ORTHO05D007431 2.8e-32 144.1 130 58.5
Thecc.07G115200 Theobroma cacao HOM05D000718 ORTHO05D007431 2.8e-32 144.1 135 58.5
TAR627G0847 Trochodendron aralioides HOM05D000718 ORTHO05D007431 3.4e-30 137.1 147 55.8
Cpa.g.sc77.7 Carica papaya HOM05D000718 ORTHO05D007431 5.4e-28 129.8 127 55.9
Psat2g113040 Pisum sativum HOM05D000718 ORTHO05D004709 1.3e-26 125.2 102 68.6
CBR_g49411 Chara braunii HOM05D000019 ORTHO05D000353 3.6e-24 117.1 430 26.5
CAN.G713.20 Capsicum annuum HOM05D000718 ORTHO05D007431 1.5e-22 111.7 104 56.7
Thecc.07G114100 Theobroma cacao HOM05D000718 ORTHO05D007431 2.6e-14 84.3 52 78.8
Thecc.07G114000 Theobroma cacao HOM05D000718 ORTHO05D007431 8.4e-13 79.3 108 44.4
Lsat_1_v5_gn_9_99920 Lactuca sativa HOM05D000718 ORTHO05D007431 3.2e-12 77.4 54 74.1
Thecc.07G113800 Theobroma cacao HOM05D000718 ORTHO05D007431 1.6e-11 75.1 63 58.7


User provided reference genes

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