Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4145 Salvia bowleyana HOM05D004571 ORTHO05D005334 2.0e-135 485.7 236 100.0
SalBow5G3518 Salvia bowleyana HOM05D002016 ORTHO05D002251 1.9e-37 160.2 87 87.4
Oeu044957.1 Olea europaea HOM05D004571 ORTHO05D005334 2.5e-29 133.3 80 76.2
Migut.C01321 Erythranthe guttata HOM05D004571 ORTHO05D005334 5.6e-29 132.1 88 70.5
Gorai.013G137900 Gossypium raimondii HOM05D004571 ORTHO05D005334 5.2e-27 125.6 82 68.3
COL.COLO4_24652 Corchorus olitorius HOM05D004571 ORTHO05D005334 8.9e-27 124.8 97 59.8
Gohir.D13G122900 Gossypium hirsutum HOM05D004571 ORTHO05D005334 1.2e-26 124.4 82 67.1
Glyma.04G256400 Glycine max HOM05D004571 ORTHO05D005334 1.5e-26 124.0 87 65.5
Gohir.A13G119100 Gossypium hirsutum HOM05D004571 ORTHO05D005334 2.6e-26 123.2 82 65.9
TAR381G0940 Trochodendron aralioides HOM05D004571 ORTHO05D005334 2.6e-26 123.2 87 69.0
Glyma.06G325200 Glycine max HOM05D004571 ORTHO05D005334 3.4e-26 122.9 87 64.4
Nn1g08340 Nelumbo nucifera HOM05D004571 ORTHO05D005334 3.4e-26 122.9 87 65.5
Carub.0002s1897 Capsella rubella HOM05D004571 ORTHO05D005334 4.4e-26 122.5 97 57.7
Gohir.D13G123000 Gossypium hirsutum HOM05D004571 ORTHO05D005334 4.4e-26 122.5 82 65.9
Lj3g0024961 Lotus japonicus HOM05D004571 ORTHO05D005334 5.8e-26 122.1 87 66.7
THA.LOC104800135 Tarenaya hassleriana HOM05D004571 ORTHO05D005334 7.5e-26 121.7 94 59.6
TWI14G1164 Tripterygium wilfordii HOM05D004571 ORTHO05D005334 7.5e-26 121.7 82 67.1
Thecc.08G192400 Theobroma cacao HOM05D004571 ORTHO05D005334 9.8e-26 121.3 82 65.9
Ciclev10002721m.g Citrus clementina HOM05D004571 ORTHO05D005334 1.3e-25 120.9 89 65.2
MELO3C022229.2 Cucumis melo HOM05D004571 ORTHO05D005334 1.3e-25 120.9 81 66.7
Gohir.A13G119200 Gossypium hirsutum HOM05D004571 ORTHO05D005334 1.3e-25 120.9 82 65.9
VMungo1080G1505 Vigna mungo HOM05D004571 ORTHO05D005334 1.3e-25 120.9 80 71.2
Ca_13497_v3 Cicer arietinum L. HOM05D004571 ORTHO05D005334 1.7e-25 120.6 81 67.9
Dinv41758 Davidia involucrata HOM05D004571 ORTHO05D005334 1.7e-25 120.6 87 69.0
Medtr3g005050 Medicago truncatula HOM05D004571 ORTHO05D005334 1.7e-25 120.6 81 70.4
Cpa.g.sc66.1 Carica papaya HOM05D004571 ORTHO05D005334 2.2e-25 120.2 80 67.5
HanXRQChr02g0036591 Helianthus annuus HOM05D004571 ORTHO05D005334 2.2e-25 120.2 86 66.3
Phvul.005G000100 Phaseolus vulgaris HOM05D004571 ORTHO05D005334 2.2e-25 120.2 80 71.2
Psat1g003360 Pisum sativum HOM05D004571 ORTHO05D005334 2.2e-25 120.2 80 70.0
Rhsim11G0053000 Rhododendron simsii HOM05D004571 ORTHO05D005334 2.2e-25 120.2 79 70.9
TAR628G0297 Trochodendron aralioides HOM05D004571 ORTHO05D005334 2.9e-25 119.8 87 67.8
CiPaw.07G235800 Carya illinoinensis HOM05D004571 ORTHO05D005334 3.7e-25 119.4 81 66.7
DCAR_014081 Daucus carota HOM05D004571 ORTHO05D005334 3.7e-25 119.4 86 62.8
Atru.chr13.2366 Acer truncatum HOM05D004571 ORTHO05D005334 4.9e-25 119.0 86 62.8
BcaB03g14960 Brassica carinata HOM05D004571 ORTHO05D005334 4.9e-25 119.0 85 57.6
CsaV3_5G040560 Cucumis sativus L. HOM05D004571 ORTHO05D005334 4.9e-25 119.0 81 65.4
ECA247G3605 Erigeron canadensis HOM05D004571 ORTHO05D005334 4.9e-25 119.0 79 67.1
SGA_v2.0_scaffold24G10606 Striga asiatica HOM05D004571 ORTHO05D005334 4.9e-25 119.0 79 67.1
TPR.G25514 Trifolium pratense HOM05D004571 ORTHO05D005334 4.9e-25 119.0 87 65.5
Haze_21312 Corylus avellana HOM05D004571 ORTHO05D005334 6.4e-25 118.6 87 64.4
GSVIVG01026083001 Vitis vinifera HOM05D004571 ORTHO05D005334 6.4e-25 118.6 87 65.5
Actinidia29414 Actinidia chinensis HOM05D004571 ORTHO05D005334 8.3e-25 118.2 75 74.7
C06p46340 Brassica napus HOM05D004571 ORTHO05D005334 1.1e-24 117.9 75 65.3
BolC6t39679H Brassica oleracea HOM05D004571 ORTHO05D005334 1.1e-24 117.9 75 65.3
AT1G72170 Arabidopsis thaliana HOM05D004571 ORTHO05D005334 1.4e-24 117.5 87 60.9
A07p38280 Brassica napus HOM05D004571 ORTHO05D005334 1.4e-24 117.5 80 61.2
Hma1.2p1_0374F.1_g138460 Hydrangea macrophylla HOM05D004571 ORTHO05D005334 1.4e-24 117.5 84 66.7
A07p30330 Brassica napus HOM05D004571 ORTHO05D005334 1.9e-24 117.1 87 58.6
BraA07t30670Z Brassica rapa HOM05D004571 ORTHO05D005334 1.9e-24 117.1 87 58.6
BraA07t31392Z Brassica rapa HOM05D004571 ORTHO05D005334 1.9e-24 117.1 80 60.0
CDE02G1838 Ceratophyllum demersum HOM05D004571 ORTHO05D005334 1.9e-24 117.1 82 68.3
QL02p026432 Quercus lobata HOM05D004571 ORTHO05D005334 1.9e-24 117.1 71 77.5
Aa31LG4G8400 Aethionema arabicum HOM05D004571 ORTHO05D005334 2.4e-24 116.7 74 66.2
AL2G31830 Arabidopsis lyrata HOM05D004571 ORTHO05D005334 2.4e-24 116.7 89 59.6
Lsat_1_v5_gn_1_25881 Lactuca sativa HOM05D004571 ORTHO05D005334 2.4e-24 116.7 76 71.1
MD15G1405800 Malus domestica HOM05D004571 ORTHO05D005334 2.4e-24 116.7 89 62.9
PSO017G1736 Papaver somniferum HOM05D004571 ORTHO05D005334 2.4e-24 116.7 86 64.0
PSO170G5138 Papaver somniferum HOM05D004571 ORTHO05D005334 2.4e-24 116.7 86 64.0
Prupe.1G555400 Prunus persica HOM05D004571 ORTHO05D005334 2.4e-24 116.7 92 60.9
PGR042G2098 Punica granatum HOM05D004571 ORTHO05D005334 2.4e-24 116.7 80 67.5
CARHR065020 Cardamine hirsuta HOM05D004571 ORTHO05D005334 3.2e-24 116.3 89 59.6
CiPaw.08G002900 Carya illinoinensis HOM05D004571 ORTHO05D005334 3.2e-24 116.3 81 64.2
CDE08G1034 Ceratophyllum demersum HOM05D004571 ORTHO05D005334 4.1e-24 115.9 82 67.1
HanXRQChr04g0101791 Helianthus annuus HOM05D004571 ORTHO05D005334 5.4e-24 115.5 77 68.8
MD08G1217900 Malus domestica HOM05D004571 ORTHO05D005334 5.4e-24 115.5 89 60.7
CANSAT25G3741 Cannabis sativa HOM05D004571 ORTHO05D005334 9.2e-24 114.8 80 65.0
Potri.013G105766 Populus trichocarpa HOM05D004571 ORTHO05D005334 2.0e-23 113.6 73 71.2
Sp5g27250 Schrenkiella parvula HOM05D004571 ORTHO05D005334 2.0e-23 113.6 89 57.3
EL10Ac1g00135 Beta vulgaris HOM05D004571 ORTHO05D005334 3.5e-23 112.8 87 63.2
AUR62004601 Chenopodium quinoa HOM05D004571 ORTHO05D005334 3.5e-23 112.8 80 67.5
AUR62023543 Chenopodium quinoa HOM05D004571 ORTHO05D005334 3.5e-23 112.8 80 67.5
Nn5g27495 Nelumbo nucifera HOM05D004571 ORTHO05D005334 3.5e-23 112.8 77 66.2
unitig_26.g9866 Utricularia gibba HOM05D004571 ORTHO05D005334 7.8e-23 111.7 77 66.2
Aqoxy5G02645 Aquilegia oxysepala HOM05D004571 ORTHO05D005334 1.0e-22 111.3 91 59.3
BolC6t38614H Brassica oleracea HOM05D004571 ORTHO05D005334 1.0e-22 111.3 74 62.2
ClCG08G000160 Citrullus lanatus HOM05D004571 ORTHO05D005334 1.0e-22 111.3 77 64.9
Sabra13G0091300 Salix brachista HOM05D004571 ORTHO05D005334 1.0e-22 111.3 73 71.2
Ah.05g178570 Amaranthus hybridus HOM05D004571 ORTHO05D005334 1.3e-22 110.9 80 65.0
THA.LOC104809727 Tarenaya hassleriana HOM05D004571 ORTHO05D005334 1.3e-22 110.9 89 59.6
Hund27115 Selenicereus undatus HOM05D004571 ORTHO05D005334 1.7e-22 110.5 75 66.7
Actinidia03516 Actinidia chinensis HOM05D004571 ORTHO05D005334 2.3e-22 110.2 81 67.9
C06p35100 Brassica napus HOM05D004571 ORTHO05D005334 2.3e-22 110.2 74 62.2
CANSAT56G3739 Cannabis sativa HOM05D004571 ORTHO05D005334 2.3e-22 110.2 87 57.5
Duzib116G0804 Durio zibethinus HOM05D004571 ORTHO05D005334 2.3e-22 110.2 105 53.3
Potri.019G079101 Populus trichocarpa HOM05D004571 ORTHO05D005334 3.0e-22 109.8 71 71.8
Zm00001eb063990 Zea mays HOM05D004571 ORTHO05D005334 3.9e-22 109.4 78 64.1
FAN13G1323 Fragaria x ananassa HOM05D004571 ORTHO05D005334 5.0e-22 109.0 96 54.2
Manes.02G223200 Manihot esculenta HOM05D004571 ORTHO05D005334 5.0e-22 109.0 76 67.1
Os03g0840900 Oryza sativa ssp. japonica HOM05D004571 ORTHO05D005334 5.0e-22 109.0 78 60.3
DCAR_017443 Daucus carota HOM05D004571 ORTHO05D005334 6.6e-22 108.6 83 61.4
ECA246G2468 Erigeron canadensis HOM05D004571 ORTHO05D005334 1.1e-21 107.8 69 72.5
FAN18G0720 Fragaria x ananassa HOM05D004571 ORTHO05D005334 1.1e-21 107.8 96 52.1
RcHm_v2.0_Chr7g0227581 Rosa chinensis HOM05D004571 ORTHO05D005334 1.1e-21 107.8 76 61.8
Solyc11g027870.2 Solanum lycopersicum HOM05D004571 ORTHO05D005334 1.1e-21 107.8 93 55.9
Sopen11g022630 Solanum pennellii HOM05D004571 ORTHO05D005334 1.1e-21 107.8 93 55.9
PGSC0003DMG400025645 Solanum tuberosum HOM05D004571 ORTHO05D005334 1.1e-21 107.8 93 54.8
Aa31LG7G6430 Aethionema arabicum HOM05D004571 ORTHO05D005334 1.5e-21 107.5 70 65.7
ATR1136G048 Amborella trichopoda HOM05D004571 ORTHO05D005334 1.5e-21 107.5 81 61.7
arahy.Tifrunner.gnm1.ann1.ET922W Arachis hypogaea HOM05D004571 ORTHO05D005334 1.5e-21 107.5 83 62.7
Carub.0001s2205 Capsella rubella HOM05D004571 ORTHO05D005334 1.5e-21 107.5 74 66.2
FvH4_5g31700 Fragaria vesca HOM05D004571 ORTHO05D005334 1.5e-21 107.5 96 52.1
Nitab4.5_0001463g0030 Nicotiana tabacum HOM05D004571 ORTHO05D005334 1.5e-21 107.5 73 65.8
Nitab4.5_0005616g0050 Nicotiana tabacum HOM05D004571 ORTHO05D005334 1.5e-21 107.5 73 65.8
Sed0021715 Sechium edule HOM05D004571 ORTHO05D005334 1.5e-21 107.5 118 48.3
FAN04G0250 Fragaria x ananassa HOM05D004571 ORTHO05D005334 1.9e-21 107.1 96 53.1
Sabra19G0089800 Salix brachista HOM05D004571 ORTHO05D005334 1.9e-21 107.1 71 70.4
Sc23g0001520 Simmondsia chinensis HOM05D004571 ORTHO05D005334 1.9e-21 107.1 88 55.7
AT1G22520 Arabidopsis thaliana HOM05D004571 ORTHO05D005334 2.5e-21 106.7 65 69.2
arahy.Tifrunner.gnm1.ann1.Q0KDHL Arachis hypogaea HOM05D008831 ORTHO05D005334 2.5e-21 106.7 74 68.9
BcaB03g14198 Brassica carinata HOM05D004571 ORTHO05D005334 3.3e-21 106.3 76 63.2
Thhalv10009192m.g Eutrema salsugineum HOM05D004571 ORTHO05D005334 3.3e-21 106.3 65 69.2
AL1G36060 Arabidopsis lyrata HOM05D004571 ORTHO05D005334 4.3e-21 105.9 65 69.2
Sp1g20030 Schrenkiella parvula HOM05D004571 ORTHO05D005334 5.6e-21 105.5 83 61.4
BcaC07g39167 Brassica carinata HOM05D004571 ORTHO05D005334 2.1e-20 103.6 69 63.8
C08p21600 Brassica napus HOM05D004571 ORTHO05D005334 2.1e-20 103.6 69 63.8
HanXRQChr13g0402341 Helianthus annuus HOM05D004571 ORTHO05D005334 2.1e-20 103.6 69 71.0
CARHR022880 Cardamine hirsuta HOM05D004571 ORTHO05D005334 2.8e-20 103.2 84 58.3
HPP92_012688 Vanilla planifolia HOM05D004571 ORTHO05D005334 2.8e-20 103.2 78 61.5
Zm00001eb211000 Zea mays HOM05D004571 ORTHO05D005334 2.8e-20 103.2 78 57.7
MBI16_g31756_MAGBIO Magnolia biondii HOM05D004571 ORTHO05D005334 3.6e-20 102.8 67 68.7
A08p28490 Brassica napus HOM05D004571 ORTHO05D005334 6.2e-20 102.1 65 66.2
BraA08t34777Z Brassica rapa HOM05D004571 ORTHO05D005334 6.2e-20 102.1 65 66.2
BcaB03g11911 Brassica carinata HOM05D004571 ORTHO05D005334 8.1e-20 101.7 65 66.2
BolC8t49798H Brassica oleracea HOM05D004571 ORTHO05D005334 8.1e-20 101.7 65 64.6
Thhalv10019513m.g Eutrema salsugineum HOM05D004571 ORTHO05D005334 8.1e-20 101.7 89 52.8
HPP92_012699 Vanilla planifolia HOM05D004571 ORTHO05D005334 8.1e-20 101.7 78 60.3
CSS0010340 Camellia sinensis var. sinensis HOM05D004571 ORTHO05D005334 1.4e-19 100.9 74 62.2
CANSAT80G2522 Cannabis sativa HOM05D004571 ORTHO05D005334 2.0e-18 97.1 69 63.8
SEGI_09168 Sequoiadendron giganteum HOM05D004571 ORTHO05D005334 2.0e-18 97.1 74 58.1
Cc10_g09660 Coffea canephora HOM05D004571 ORTHO05D005334 1.3e-17 94.4 75 54.7
MD17G1233400 Malus domestica HOM05D004571 ORTHO05D005334 1.3e-17 94.4 79 58.2
HPP92_016944 Vanilla planifolia HOM05D004571 ORTHO05D005334 1.3e-17 94.4 77 62.3
Peaxi162Scf00076g00210 Petunia axillaris HOM05D004571 ORTHO05D005334 2.9e-17 93.2 96 49.0
AagrBONN_evm.TU.Sc2ySwM_344.525 Anthoceros agrestis HOM05D004571 ORTHO05D005334 1.1e-16 91.3 79 54.4
A07p14330 Brassica napus HOM05D004571 ORTHO05D005334 1.9e-16 90.5 70 54.3
BraA07t29189Z Brassica rapa HOM05D004571 ORTHO05D005334 1.9e-16 90.5 70 54.3
SalBow1G4736 Salvia bowleyana HOM05D004571 ORTHO05D005334 1.6e-15 87.4 66 63.6
Peaxi162Scf00688g00440 Petunia axillaris HOM05D004571 ORTHO05D005334 3.5e-15 86.3 83 48.2
SalBow8G4375 Salvia bowleyana HOM05D004571 ORTHO05D005334 3.5e-15 86.3 66 62.1
SalBow7G3147 Salvia bowleyana HOM05D004571 ORTHO05D005334 1.3e-14 84.3 66 60.6
AagrBONN_evm.TU.Sc2ySwM_117.1227 Anthoceros agrestis HOM05D004571 ORTHO05D005334 3.0e-14 83.2 74 52.7
PSO170G6605 Papaver somniferum HOM05D004571 ORTHO05D005334 1.1e-13 81.3 58 60.3
Pp3c5_3370 Physcomitrium patens HOM05D004571 ORTHO05D005334 2.5e-13 80.1 82 46.3
Pp3c6_25110 Physcomitrium patens HOM05D004571 ORTHO05D005334 2.5e-13 80.1 70 50.0
SMO170G0007 Selaginella moellendorffii HOM05D004571 ORTHO05D005334 5.6e-13 79.0 55 61.8
Mapoly0097s0059 Marchantia polymorpha HOM05D004571 ORTHO05D005334 7.3e-13 78.6 65 52.3
C07p21100 Brassica napus HOM05D004571 ORTHO05D005334 1.6e-12 77.4 114 36.8
CBR_g28554 Chara braunii HOM05D004571 ORTHO05D005334 3.6e-12 76.3 76 48.7
Pp3c16_13970 Physcomitrium patens HOM05D004571 ORTHO05D005334 3.6e-12 76.3 67 53.7
SalBow1G5773 Salvia bowleyana HOM05D004571 ORTHO05D005334 4.7e-12 75.9 60 60.0
CSS0023243 Camellia sinensis var. sinensis HOM05D004571 ORTHO05D005334 6.8e-11 72.0 61 55.7
SMO356G0601 Selaginella moellendorffii HOM05D004571 ORTHO05D005334 9.9e-10 68.2 63 42.9
Gorai.013G138000 Gossypium raimondii HOM05D004571 ORTHO05D005334 6.4e-09 65.5 44 63.6
PRCOL_00006286 Prasinoderma coloniale HOM05D004571 ORTHO05D005334 2.4e-08 63.5 64 43.8
TWI23G0269 Tripterygium wilfordii HOM05D004571 ORTHO05D005334 4.6e-07 59.3 67 46.3


User provided reference genes

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