Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 2.1e-266 921.8 452 100.0
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 7.1e-182 641.0 448 70.3
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 6.6e-180 634.4 451 72.3
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 4.6e-173 611.7 454 67.8
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 3.6e-170 602.1 448 67.2
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 9.0e-169 597.4 449 65.5
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 5.8e-168 594.7 453 66.4
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 2.7e-165 585.9 453 64.9
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 7.3e-163 577.8 394 71.8
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 3.8e-159 565.5 453 62.3
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 2.8e-154 549.3 466 60.1
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 1.8e-153 546.6 443 64.1
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 1.9e-150 536.6 448 61.2
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 1.9e-150 536.6 459 59.5
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 2.4e-150 536.2 452 61.9
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 2.4e-150 536.2 463 59.6
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 3.2e-150 535.8 460 58.9
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 1.2e-149 533.9 358 70.4
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 1.3e-148 530.4 456 59.4
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 8.7e-148 527.7 455 59.8
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 1.9e-147 526.6 457 59.1
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 9.6e-147 524.2 460 58.7
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 9.6e-147 524.2 428 62.4
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 1.6e-146 523.5 452 59.3
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 1.1e-145 520.8 469 56.9
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 9.0e-145 517.7 462 57.6
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 1.2e-144 517.3 454 57.9
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 2.0e-144 516.5 462 57.6
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 2.6e-144 516.2 454 57.7
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 2.6e-144 516.2 455 57.4
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 3.4e-144 515.8 452 58.4
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 4.5e-144 515.4 455 57.4
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 7.6e-144 514.6 455 55.8
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 7.6e-144 514.6 455 57.1
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 7.6e-144 514.6 457 56.7
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.0e-143 514.2 451 59.0
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 2.2e-143 513.1 448 59.2
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 1.9e-142 510.0 462 58.2
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 4.2e-142 508.8 450 57.8
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 7.1e-142 508.1 459 57.3
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 7.1e-142 508.1 443 58.0
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 1.6e-141 506.9 452 55.3
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 1.6e-141 506.9 433 61.0
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 2.1e-141 506.5 442 57.7
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.7e-141 506.1 469 57.6
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 2.7e-141 506.1 447 57.7
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 6.0e-141 505.0 449 57.2
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 1.0e-140 504.2 446 59.0
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 1.8e-140 503.4 457 57.1
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 3.0e-140 502.7 458 57.0
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 3.9e-140 502.3 454 55.5
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 5.1e-140 501.9 453 57.2
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 6.7e-140 501.5 455 56.3
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.9e-139 500.0 452 54.6
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 4.3e-139 498.8 448 57.1
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 4.3e-139 498.8 451 57.0
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 5.7e-139 498.4 476 55.3
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 7.4e-139 498.0 452 54.4
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 9.7e-139 497.7 449 57.2
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 2.8e-138 496.1 413 62.7
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 3.7e-138 495.7 438 56.4
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 1.4e-137 493.8 461 55.5
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.8e-137 493.4 438 56.6
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 1.8e-137 493.4 438 56.6
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 3.1e-137 492.7 454 56.2
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 3.1e-137 492.7 454 56.2
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 3.1e-137 492.7 454 56.2
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 4.1e-137 492.3 369 63.1
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 5.3e-137 491.9 455 54.9
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 5.3e-137 491.9 450 56.7
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 5.3e-137 491.9 441 58.5
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 6.9e-137 491.5 461 56.4
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 9.0e-137 491.1 453 56.1
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 1.2e-136 490.7 458 55.0
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 2.0e-136 490.0 470 54.5
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 2.6e-136 489.6 394 60.4
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 3.4e-136 489.2 446 55.6
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 5.9e-136 488.4 439 56.3
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 7.7e-136 488.0 450 56.2
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.7e-135 486.9 411 59.1
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 2.2e-135 486.5 432 56.0
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 2.9e-135 486.1 440 56.8
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 2.9e-135 486.1 440 56.8
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 2.9e-135 486.1 440 56.8
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 3.8e-135 485.7 437 57.0
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 3.8e-135 485.7 451 55.4
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 6.5e-135 485.0 447 55.9
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 6.5e-135 485.0 436 57.3
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 1.1e-134 484.2 440 57.0
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 1.1e-134 484.2 437 57.0
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 1.4e-134 483.8 456 54.4
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 1.9e-134 483.4 433 56.4
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 1.9e-134 483.4 439 57.6
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 2.5e-134 483.0 452 54.2
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 2.5e-134 483.0 370 63.0
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 2.5e-134 483.0 451 55.2
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 3.2e-134 482.6 369 62.9
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 5.5e-134 481.9 438 56.6
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 3.6e-133 479.2 439 56.9
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 4.6e-133 478.8 446 54.0
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 6.1e-133 478.4 453 55.4
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 1.0e-132 477.6 434 55.3
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 1.8e-132 476.9 455 53.4
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 5.1e-132 475.3 438 55.5
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 5.1e-132 475.3 483 51.6
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 1.1e-131 474.2 453 54.7
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 3.3e-131 472.6 431 55.7
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 9.7e-131 471.1 451 53.2
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 4.8e-130 468.8 446 55.4
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 6.3e-130 468.4 436 54.8
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 4.1e-129 465.7 447 52.6
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 1.0e-127 461.1 445 52.4
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 1.4e-126 457.2 436 53.2
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 1.9e-126 456.8 436 53.7
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 2.5e-126 456.4 456 51.8
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 3.2e-126 456.1 341 65.4
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.7e-122 442.6 451 49.4
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 1.8e-121 440.3 443 50.8
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 4.5e-120 435.6 369 56.4
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 1.7e-119 433.7 438 53.2
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 3.6e-117 426.0 373 56.0
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 3.0e-116 422.9 455 50.1
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 5.2e-116 422.2 462 50.4
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 6.7e-116 421.8 441 51.9
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 1.5e-115 420.6 456 49.6
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 2.0e-115 420.2 457 49.7
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 3.3e-115 419.5 434 51.2
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 4.4e-115 419.1 440 50.9
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 9.7e-115 417.9 445 51.5
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 1.7e-114 417.2 452 49.8
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 3.7e-114 416.0 452 48.9
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 1.1e-113 414.5 440 52.5
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 5.3e-113 412.1 453 49.7
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 1.2e-112 411.0 318 60.1
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 4.5e-112 409.1 452 50.2
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 2.9e-111 406.4 443 49.9
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.1e-110 404.4 397 52.1
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 9.4e-110 401.4 478 47.9
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.0e-108 397.9 421 50.1
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 4.8e-106 389.0 335 57.3
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 3.1e-105 386.3 372 51.6
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 5.3e-105 385.6 392 49.5
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 1.2e-104 384.4 392 49.5
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 2.9e-103 379.8 466 46.1
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 1.9e-102 377.1 250 68.4
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 1.7e-98 364.0 318 55.7
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 3.7e-98 362.8 364 49.5
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 6.3e-98 362.1 404 47.0
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 4.2e-94 349.4 251 61.8
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 1.5e-91 340.9 240 65.4
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 3.4e-91 339.7 241 65.1
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 1.1e-89 334.7 370 44.9
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.4e-89 333.6 367 45.8
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 2.3e-87 327.0 369 45.5
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 2.5e-86 323.6 236 61.0
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.6e-85 319.7 373 44.8
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 5.8e-83 312.4 368 43.2
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 5.8e-83 312.4 441 41.3
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 2.9e-82 310.1 314 56.4
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 9.2e-81 305.1 236 58.9
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 1.1e-73 281.6 241 53.9
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 4.1e-73 279.6 370 40.8
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 5.1e-71 272.7 325 43.1
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.3e-70 270.0 365 40.0
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.3e-68 263.8 371 36.7
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.9e-65 254.2 386 37.3
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.2e-65 253.4 438 35.4
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 7.1e-65 252.3 364 37.4
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.0e-63 246.9 369 36.9
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 1.3e-53 214.9 377 34.2
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 3.2e-41 173.7 152 58.6
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 1.5e-38 164.9 179 49.2
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 2.3e-31 141.0 423 26.2
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 4.3e-22 110.2 114 45.6
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 5.9e-19 99.8 85 50.6
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.0e-18 99.0 119 40.3
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.6e-16 90.5 118 37.3
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 1.4e-15 88.6 79 46.8
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 8.2e-13 79.3 119 48.7
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.1e-12 79.0 110 43.6
ATR0555G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.8e-07 61.6 67 38.8
Prupe.6G163800 Prunus persica HOM05D003764 ORTHO05D335910 1.5e-06 58.5 47 63.8


User provided reference genes

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