Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4044 Salvia bowleyana HOM05D003733 ORTHO05D004035 5.8e-270 933.7 497 100.0
SalBow5G1957 Salvia bowleyana HOM05D003733 ORTHO05D004035 6.4e-176 621.3 473 75.5
MSTRG.3501 Avicennia marina HOM05D003733 ORTHO05D004035 5.3e-106 389.0 481 51.4
Migut.L00442 Erythranthe guttata HOM05D003733 ORTHO05D004035 3.7e-99 366.3 488 50.0
SGA_v2.0_scaffold13G06400 Striga asiatica HOM05D003733 ORTHO05D004035 9.1e-82 308.5 464 45.5
GSVIVG01003708001 Vitis vinifera HOM05D003733 ORTHO05D004035 1.5e-79 301.2 471 46.3
Actinidia36390 Actinidia chinensis HOM05D003733 ORTHO05D004035 2.5e-79 300.4 470 46.4
Lj4A174T33 Lonicera japonica HOM05D003733 ORTHO05D004035 1.2e-76 291.6 456 43.6
CSS0008611 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 1.5e-76 291.2 490 44.9
QL06p037705 Quercus lobata HOM05D003733 ORTHO05D004035 2.6e-76 290.4 480 43.1
Dinv26992 Davidia involucrata HOM05D003733 ORTHO05D004035 1.7e-75 287.7 468 46.4
Cfa006814 Carpinus fangiana HOM05D003733 ORTHO05D004035 4.5e-73 279.6 475 42.9
Oeu054739.1 Olea europaea HOM05D003733 ORTHO05D004035 1.0e-72 278.5 414 48.6
CAN.G1061.16 Capsicum annuum HOM05D003733 ORTHO05D004035 2.9e-72 276.9 506 43.1
CiPaw.12G004300 Carya illinoinensis HOM05D003733 ORTHO05D004035 8.6e-72 275.4 475 44.8
SGA_v2.0_scaffold174G39242 Striga asiatica HOM05D003733 ORTHO05D004035 3.3e-71 273.5 463 40.6
Actinidia11935 Actinidia chinensis HOM05D003733 ORTHO05D004035 5.6e-71 272.7 475 44.0
PGSC0003DMG400030618 Solanum tuberosum HOM05D003733 ORTHO05D004035 1.2e-70 271.6 481 44.7
Nitab4.5_0000396g0250 Nicotiana tabacum HOM05D003733 ORTHO05D004035 4.7e-70 269.6 435 47.8
unitig_0.g2606 Utricularia gibba HOM05D003733 ORTHO05D004035 8.0e-70 268.9 471 44.4
Nn1g05776 Nelumbo nucifera HOM05D003733 ORTHO05D004035 4.0e-69 266.5 448 43.1
Nitab4.5_0014307g0010 Nicotiana tabacum HOM05D003733 ORTHO05D004035 2.0e-68 264.2 530 40.9
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 2.6e-68 263.8 455 43.1
TAR381G0096 Trochodendron aralioides HOM05D003733 ORTHO05D004035 4.4e-68 263.1 430 42.6
vmacro07413 Vaccinium macrocarpon HOM05D003733 ORTHO05D004035 1.3e-67 261.5 474 42.2
Cc07_g07720 Coffea canephora HOM05D003733 ORTHO05D004035 4.9e-67 259.6 469 43.1
Nitab4.5_0000465g0130 Nicotiana tabacum HOM05D003733 ORTHO05D004035 1.4e-66 258.1 530 41.7
TWI53G0148 Tripterygium wilfordii HOM05D003733 ORTHO05D004035 2.0e-65 254.2 465 41.9
PGR102G0988 Punica granatum HOM05D003733 ORTHO05D004035 3.9e-64 250.0 540 39.6
Medtr5g030610 Medicago truncatula HOM05D003733 ORTHO05D004035 2.5e-63 247.3 446 41.9
Medtr5g430710 Medicago truncatula HOM05D003733 ORTHO05D008786 2.5e-63 247.3 446 41.9
TAR376G0930 Trochodendron aralioides HOM05D003733 ORTHO05D004035 7.3e-63 245.7 463 42.1
RcHm_v2.0_Chr2g0109681 Rosa chinensis HOM05D003733 ORTHO05D004035 3.6e-62 243.4 487 39.2
Prupe.6G211200 Prunus persica HOM05D003733 ORTHO05D004035 4.0e-61 240.0 498 37.8
Haze_03945 Corylus avellana HOM05D003733 ORTHO05D004035 6.8e-61 239.2 474 40.3
Peaxi162Scf00118g00109 Petunia axillaris HOM05D003733 ORTHO05D004035 1.2e-60 238.4 554 39.4
TPR.G1045 Trifolium pratense HOM05D003733 ORTHO05D008786 7.5e-60 235.7 453 40.6
Oeu054741.2 Olea europaea HOM05D003733 ORTHO05D004035 1.3e-59 235.0 401 42.9
Glyma.08G272800 Glycine max HOM05D003733 ORTHO05D004035 8.3e-59 232.3 488 38.1
Potri.007G009700 Populus trichocarpa HOM05D003733 ORTHO05D004035 3.2e-58 230.3 425 40.0
Thecc.01G082000 Theobroma cacao HOM05D003733 ORTHO05D004035 2.0e-57 227.6 482 41.7
Atru.chr3.1125_Atru.chr3.1126 Acer truncatum HOM05D003733 ORTHO05D004035 3.5e-57 226.9 438 40.0
Atru.chr3.1134_Atru.chr3.1135 Acer truncatum HOM05D003733 ORTHO05D004035 3.5e-57 226.9 438 40.0
vmacro20437 Vaccinium macrocarpon HOM05D003733 ORTHO05D004035 3.0e-56 223.8 480 39.6
Sopen02g036340 Solanum pennellii HOM05D003733 ORTHO05D004035 6.6e-56 222.6 456 40.1
unitig_88.g27718 Utricularia gibba HOM05D003733 ORTHO05D004035 8.6e-56 222.2 490 38.8
Ciclev10025536m.g Citrus clementina HOM05D003733 ORTHO05D004035 1.1e-55 221.9 485 39.4
TAR625G0952 Trochodendron aralioides HOM05D003733 ORTHO05D004035 2.5e-55 220.7 414 40.1
HanXRQChr17g0561681 Helianthus annuus HOM05D003733 ORTHO05D004035 4.3e-55 219.9 463 39.3
ClCG01G018090 Citrullus lanatus HOM05D003733 ORTHO05D008786 9.5e-55 218.8 424 40.1
Nitab4.5_0000093g0190 Nicotiana tabacum HOM05D003733 ORTHO05D004035 1.1e-53 215.3 413 43.8
Aqoxy4G03244 Aquilegia oxysepala HOM05D003733 ORTHO05D004035 2.3e-53 214.2 444 39.2
CAN.G11.21 Capsicum annuum HOM05D003733 ORTHO05D004035 2.3e-53 214.2 580 36.9
Glyma.01G097200 Glycine max HOM05D003733 ORTHO05D004035 2.3e-53 214.2 434 37.8
CSS0020555 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 1.2e-52 211.8 358 45.0
Ca_06073_v3 Cicer arietinum L. HOM05D003733 ORTHO05D004035 1.2e-52 211.8 423 39.0
Phvul.002G139100 Phaseolus vulgaris HOM05D003733 ORTHO05D004035 3.4e-52 210.3 475 37.5
Psat2g135720 Pisum sativum HOM05D003733 ORTHO05D004035 4.4e-52 209.9 438 38.1
Solyc03g043760.4 Solanum lycopersicum HOM05D003733 ORTHO05D004035 7.5e-52 209.1 591 36.0
Sopen03g007620 Solanum pennellii HOM05D003733 ORTHO05D004035 1.3e-51 208.4 591 36.0
Lalb_Chr16g0381411 Lupinus albus HOM05D003733 ORTHO05D004035 6.4e-51 206.1 431 38.5
Sabra07G0007400 Salix brachista HOM05D003733 ORTHO05D008786 8.3e-51 205.7 399 38.8
CSS0006986 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 2.4e-50 204.1 329 44.4
Lj2g0016248 Lotus japonicus HOM05D003733 ORTHO05D004035 2.4e-50 204.1 470 37.2
VMungo1215G3108 Vigna mungo HOM05D003733 ORTHO05D004035 1.2e-49 201.8 473 37.4
DCAR_025843 Daucus carota HOM05D003733 ORTHO05D004035 2.1e-49 201.1 496 35.1
FAN23G1272 Fragaria x ananassa HOM05D003733 ORTHO05D004035 1.7e-48 198.0 491 35.6
FvH4_1g18820 Fragaria vesca HOM05D003733 ORTHO05D004035 6.6e-48 196.1 536 34.5
HanXRQChr12g0366081 Helianthus annuus HOM05D003733 ORTHO05D004035 3.3e-47 193.7 442 39.4
Lj4g0014652 Lotus japonicus HOM05D003733 ORTHO05D004035 3.3e-47 193.7 431 38.1
arahy.Tifrunner.gnm1.ann1.EGH0HL Arachis hypogaea HOM05D003733 ORTHO05D004035 4.3e-47 193.4 391 40.9
FAN19G3013 Fragaria x ananassa HOM05D003733 ORTHO05D004035 1.2e-46 191.8 544 32.9
arahy.Tifrunner.gnm1.ann1.24SHUP Arachis hypogaea HOM05D003733 ORTHO05D004035 1.6e-46 191.4 390 40.3
MELO3C007686.2 Cucumis melo HOM05D003733 ORTHO05D004035 2.1e-46 191.0 485 36.1
Potri.005G148700 Populus trichocarpa HOM05D003733 ORTHO05D004035 2.1e-46 191.0 434 36.6
ECA233G0477 Erigeron canadensis HOM05D003733 ORTHO05D004035 3.6e-46 190.3 536 33.0
Manes.13G105200 Manihot esculenta HOM05D003733 ORTHO05D004035 6.2e-46 189.5 427 37.5
THA.LOC104804189 Tarenaya hassleriana HOM05D003733 ORTHO05D004035 1.1e-45 188.7 543 36.6
Duzib264G0286 Durio zibethinus HOM05D003733 ORTHO05D004035 1.4e-45 188.3 464 35.8
Manes.12G120000 Manihot esculenta HOM05D003733 ORTHO05D004035 1.4e-45 188.3 417 37.4
PSO761G0336 Papaver somniferum HOM05D003733 ORTHO05D004035 1.4e-45 188.3 490 35.3
CsaV3_6G044630 Cucumis sativus L. HOM05D003733 ORTHO05D004035 5.2e-45 186.4 495 35.8
ATR0584G133 Amborella trichopoda HOM05D003733 ORTHO05D004035 6.8e-45 186.0 441 35.8
MD16G1281700 Malus domestica HOM05D003733 ORTHO05D004035 6.8e-45 186.0 516 38.0
MD01G1046400 Malus domestica HOM05D003733 ORTHO05D004035 8.9e-45 185.7 525 36.8
PSO210G1228 Papaver somniferum HOM05D003733 ORTHO05D004035 1.5e-44 184.9 489 34.6
Lsat_1_v5_gn_8_34760 Lactuca sativa HOM05D003733 ORTHO05D004035 7.6e-44 182.6 460 35.4
arahy.Tifrunner.gnm1.ann1.DCX0GA Arachis hypogaea HOM05D003733 ORTHO05D004035 1.3e-43 181.8 443 34.5
arahy.Tifrunner.gnm1.ann1.KS8TVJ Arachis hypogaea HOM05D003733 ORTHO05D004035 1.3e-43 181.8 443 34.5
PGSC0003DMG400016686 Solanum tuberosum HOM05D003733 ORTHO05D004035 2.9e-43 180.6 361 41.3
CiPaw.12G004100 Carya illinoinensis HOM05D003733 ORTHO05D004035 3.8e-43 180.3 362 40.9
Sed0014908 Sechium edule HOM05D003733 ORTHO05D004035 4.9e-43 179.9 500 32.6
Phvul.003G285300 Phaseolus vulgaris HOM05D003733 ORTHO05D004035 1.9e-42 177.9 554 31.6
Sed0009716 Sechium edule HOM05D003733 ORTHO05D004035 3.2e-42 177.2 437 35.2
COL.COLO4_11664 Corchorus olitorius HOM05D000513 ORTHO05D008786 7.8e-41 172.6 512 33.6
Eucgr.D00182 Eucalyptus grandis HOM05D003733 ORTHO05D004035 3.9e-40 170.2 535 33.5
Gorai.003G035000 Gossypium raimondii HOM05D003733 ORTHO05D004035 6.6e-40 169.5 562 33.8
Gohir.D03G033400 Gossypium hirsutum HOM05D003733 ORTHO05D004035 1.1e-39 168.7 537 31.8
PSO832G4530 Papaver somniferum HOM05D003733 ORTHO05D004035 2.5e-39 167.5 492 34.1
CANSAT01G3253 Cannabis sativa HOM05D003733 ORTHO05D004035 3.3e-39 167.2 562 33.5
ATR0706G065 Amborella trichopoda HOM05D003733 ORTHO05D004035 7.3e-39 166.0 476 33.4
VMungo0251G1204 Vigna mungo HOM05D003733 ORTHO05D004035 7.3e-39 166.0 474 34.0
HPP92_024603 Vanilla planifolia HOM05D003733 ORTHO05D004035 1.2e-38 165.2 410 35.1
THA.LOC104807653 Tarenaya hassleriana HOM05D003733 ORTHO05D004035 2.1e-38 164.5 611 30.6
MD02G1269400 Malus domestica HOM05D003733 ORTHO05D004035 2.8e-38 164.1 472 34.7
Gohir.A02G147000 Gossypium hirsutum HOM05D003733 ORTHO05D004035 3.6e-38 163.7 538 34.6
Sc03g0000640 Simmondsia chinensis HOM05D003733 ORTHO05D004035 3.6e-38 163.7 498 35.3
Lj3g0005458 Lotus japonicus HOM05D003733 ORTHO05D004035 8.1e-38 162.5 430 35.3
BcaB06g27818 Brassica carinata HOM05D003733 ORTHO05D004035 1.1e-37 162.2 532 32.1
Lalb_Chr09g0325721 Lupinus albus HOM05D003733 ORTHO05D004035 1.1e-37 162.2 435 34.5
Solyc02g091730.3 Solanum lycopersicum HOM05D003733 ORTHO05D004035 1.4e-37 161.8 364 39.6
BolC8t51612H Brassica oleracea HOM05D003733 ORTHO05D004035 2.4e-37 161.0 550 32.4
Duzib147G1539 Durio zibethinus HOM05D003733 ORTHO05D004035 3.1e-37 160.6 455 34.5
VMungo1309G1560 Vigna mungo HOM05D003733 ORTHO05D004035 5.2e-37 159.8 473 33.2
CDE10G0903 Ceratophyllum demersum HOM05D003733 ORTHO05D004035 9.0e-37 159.1 516 31.0
C08p40430 Brassica napus HOM05D003733 ORTHO05D004035 2.0e-36 157.9 546 32.4
A09p57340 Brassica napus HOM05D003733 ORTHO05D004035 1.7e-35 154.8 559 30.2
BraA04t17347Z Brassica rapa HOM05D003733 ORTHO05D004035 3.2e-34 150.6 525 33.9
MBI16_g41329_MAGBIO Magnolia biondii HOM05D003733 ORTHO05D004035 7.1e-34 149.4 366 34.4
PSO782G1301 Papaver somniferum HOM05D003733 ORTHO05D004035 1.6e-33 148.3 524 35.3
C04p52030 Brassica napus HOM05D002219 ORTHO05D002713 2.1e-33 147.9 526 34.0
Aa31LG7G14100 Aethionema arabicum HOM05D003733 ORTHO05D004035 7.8e-33 146.0 587 31.3
Sp4g01710 Schrenkiella parvula HOM05D003733 ORTHO05D004035 2.3e-32 144.4 517 32.7
CAN.G630.65 Capsicum annuum HOM05D003733 ORTHO05D004035 3.9e-32 143.7 418 34.9
BolC4t26775H Brassica oleracea HOM05D003733 ORTHO05D004035 1.5e-31 141.7 531 34.1
CDE10G0649 Ceratophyllum demersum HOM05D003733 ORTHO05D004035 1.9e-31 141.4 515 31.1
AL4G12240 Arabidopsis lyrata HOM05D003733 ORTHO05D004035 3.3e-31 140.6 564 32.1
Hund23622 Selenicereus undatus HOM05D003733 ORTHO05D004035 5.6e-31 139.8 291 37.8
A04p17190 Brassica napus HOM05D002219 ORTHO05D002713 9.6e-31 139.0 510 31.4
MBI16_g20893_MAGBIO Magnolia biondii HOM05D003733 ORTHO05D004035 3.4e-28 130.6 298 36.9
CARHR246250 Cardamine hirsuta HOM05D003733 ORTHO05D004035 1.3e-27 128.6 391 35.8
EL10As13g24049 Beta vulgaris HOM05D003733 ORTHO05D004035 2.2e-27 127.9 430 30.2
SEGI_33741 Sequoiadendron giganteum HOM05D003733 ORTHO05D004035 2.2e-27 127.9 452 32.3
AUR62027209 Chenopodium quinoa HOM05D003733 ORTHO05D004035 6.4e-27 126.3 429 32.9
BraA09t41127Z Brassica rapa HOM05D003733 ORTHO05D004035 1.4e-26 125.2 540 29.4
AUR62003259 Chenopodium quinoa HOM05D003733 ORTHO05D004035 1.4e-26 125.2 430 34.7
AT2G22720 Arabidopsis thaliana HOM05D003733 ORTHO05D004035 1.9e-26 124.8 577 31.0
Sc16g0000790 Simmondsia chinensis HOM05D003733 ORTHO05D004035 1.9e-26 124.8 208 44.2
CARHR114000 Cardamine hirsuta HOM05D003733 ORTHO05D004035 3.5e-25 120.6 554 30.7
Zm00001eb429410 Zea mays HOM05D003733 ORTHO05D004035 6.7e-24 116.3 545 28.8
Cpa.g.sc129.28 Carica papaya HOM05D003733 ORTHO05D004035 2.5e-23 114.4 440 28.9
Os11g0296800 Oryza sativa ssp. japonica HOM05D003733 ORTHO05D004035 3.3e-23 114.0 535 27.9
Carub.0004s0185 Capsella rubella HOM05D003733 ORTHO05D004035 5.6e-23 113.2 552 27.9
Hma1.2p1_0723F.1_g208790 Hydrangea macrophylla HOM05D003733 ORTHO05D004035 7.4e-23 112.8 217 41.9
AT4G37860 Arabidopsis thaliana HOM05D003733 ORTHO05D004035 2.8e-22 110.9 429 30.8
Prupe.2G308100 Prunus persica HOM05D003733 ORTHO05D004035 1.4e-18 98.6 139 48.2
SHI12093 Sapria himalayana HOM05D003733 ORTHO05D004035 1.4e-18 98.6 195 38.5
C01p01330 Brassica napus HOM05D003733 ORTHO05D004035 1.9e-18 98.2 408 30.1
Aqoxy6G00872 Aquilegia oxysepala HOM05D003733 ORTHO05D004035 1.3e-16 92.0 395 26.8
BcaNung00967 Brassica carinata HOM05D003733 ORTHO05D004035 3.0e-16 90.9 393 29.0
Oeu012608.1 Olea europaea HOM05D003733 ORTHO05D004035 1.5e-15 88.6 106 51.9
Sp7g35500 Schrenkiella parvula HOM05D003733 ORTHO05D004035 1.5e-15 88.6 366 29.8
SEGI_29083 Sequoiadendron giganteum HOM05D003733 ORTHO05D004035 1.5e-15 88.6 515 26.8
Thhalv10000080m.g Eutrema salsugineum HOM05D003733 ORTHO05D004035 3.3e-15 87.4 500 26.4
Potri.001G257300 Populus trichocarpa HOM05D003733 ORTHO05D004035 9.6e-15 85.9 415 29.6
Prupe.1G068500 Prunus persica HOM05D003733 ORTHO05D004035 9.6e-15 85.9 460 27.8
BolC1t00129H Brassica oleracea HOM05D003733 ORTHO05D004035 1.3e-14 85.5 402 28.6
A01p01170 Brassica napus HOM05D003733 ORTHO05D004035 6.2e-14 83.2 392 28.6
Os02g0664400 Oryza sativa ssp. japonica HOM05D003733 ORTHO05D004035 6.2e-14 83.2 399 25.8
Manes.06G161600 Manihot esculenta HOM05D003733 ORTHO05D004035 3.1e-13 80.9 379 26.6
AL7G12820 Arabidopsis lyrata HOM05D003733 ORTHO05D004035 4.0e-13 80.5 269 32.0
Dinv36994 Davidia involucrata HOM05D003733 ORTHO05D004035 4.0e-13 80.5 149 38.9
BraA01t00115Z Brassica rapa HOM05D003733 ORTHO05D004035 2.0e-12 78.2 410 28.0
Sabra16G0157300 Salix brachista HOM05D003733 ORTHO05D004035 2.6e-12 77.8 418 28.2
Lalb_Chr05g0216131 Lupinus albus HOM05D001142 ORTHO05D003453 5.8e-12 76.6 311 27.3
Sabra16G0155500 Salix brachista HOM05D003733 ORTHO05D004035 1.3e-11 75.5 396 28.8
CSS0018014 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 2.9e-11 74.3 91 47.3
SGA_v2.0_scaffold55G19776 Striga asiatica HOM05D003733 ORTHO05D004035 3.8e-11 73.9 386 25.6
MD15G1405500 Malus domestica HOM05D005427 ORTHO05D006461 1.1e-10 72.4 137 44.5
Thhalv10026061m.g Eutrema salsugineum HOM05D003733 ORTHO05D004035 1.4e-10 72.0 316 30.4
CSS0014575 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 4.2e-10 70.5 76 52.6
COL.COLO4_36255 Corchorus olitorius HOM05D003733 ORTHO05D004035 4.6e-09 67.0 414 26.3
Sc16g0000800 Simmondsia chinensis HOM05D003733 ORTHO05D004035 2.3e-08 64.7 157 30.6
CANSAT11G2490 Cannabis sativa HOM05D003733 ORTHO05D004035 3.0e-08 64.3 433 26.6
Ah.03g142000 Amaranthus hybridus HOM05D000288 ORTHO05D000173 6.7e-08 63.2 446 26.9
CARHR207720 Cardamine hirsuta HOM05D003733 ORTHO05D004035 4.3e-07 60.5 389 26.2
Zm00001eb186830 Zea mays HOM05D003733 ORTHO05D004035 1.3e-06 58.9 278 28.1


User provided reference genes

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