Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G4042 Salvia bowleyana HOM05D004490 ORTHO05D005353 4.5e-80 301.2 154 100.0
SalBow7G1708 Salvia bowleyana HOM05D004490 ORTHO05D005353 8.0e-77 290.4 151 98.7
SalBow4G3000 Salvia bowleyana HOM05D004490 ORTHO05D005353 6.6e-31 137.9 98 76.5
SalBow7G0993 Salvia bowleyana HOM05D004490 ORTHO05D005353 6.6e-31 137.9 98 76.5
MSTRG.1522 Avicennia marina HOM05D004490 ORTHO05D005353 4.4e-27 125.2 98 68.4
SGA_v2.0_scaffold118G32473 Striga asiatica HOM05D004490 ORTHO05D005353 1.3e-26 123.6 91 69.2
Migut.C01248 Erythranthe guttata HOM05D004490 ORTHO05D005353 1.1e-25 120.6 91 68.1
HanXRQChr10g0290501 Helianthus annuus HOM05D004490 ORTHO05D005353 1.1e-25 120.6 98 64.3
ECA234G1973 Erigeron canadensis HOM05D004490 ORTHO05D005353 1.9e-25 119.8 98 63.3
unitig_699.g19825 Utricularia gibba HOM05D004490 ORTHO05D005353 4.2e-25 118.6 91 68.1
vmacro11670 Vaccinium macrocarpon HOM05D004490 ORTHO05D005353 5.4e-25 118.2 91 67.0
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 7.1e-25 117.9 91 65.9
Oeu021013.3 Olea europaea HOM05D004490 ORTHO05D005353 7.1e-25 117.9 91 68.1
Potri.019G083700 Populus trichocarpa HOM05D004490 ORTHO05D005353 7.1e-25 117.9 79 75.9
MD04G1003500 Malus domestica HOM05D004490 ORTHO05D005353 2.7e-24 115.9 91 65.9
Sabra19G0095100 Salix brachista HOM05D004490 ORTHO05D005353 2.7e-24 115.9 84 70.2
Lj7A289G25 Lonicera japonica HOM05D004490 ORTHO05D005353 3.5e-24 115.5 91 64.8
Rhsim11G0059700 Rhododendron simsii HOM05D004490 ORTHO05D005353 4.6e-24 115.2 91 65.9
PGR102G0893 Punica granatum HOM05D004490 ORTHO05D005353 6.0e-24 114.8 79 73.4
CSS0029963 Camellia sinensis var. sinensis HOM05D004490 ORTHO05D005353 1.0e-23 114.0 91 64.8
Cc10_g11460 Coffea canephora HOM05D004490 ORTHO05D005353 1.0e-23 114.0 87 67.8
FAN17G1649 Fragaria x ananassa HOM05D004490 ORTHO05D005353 1.3e-23 113.6 98 62.2
Dinv41710 Davidia involucrata HOM05D004490 ORTHO05D005353 1.7e-23 113.2 91 64.8
Aqoxy2G03181 Aquilegia oxysepala HOM05D004490 ORTHO05D005353 2.3e-23 112.8 79 73.4
Ah.05g178090 Amaranthus hybridus HOM05D004490 ORTHO05D005353 3.0e-23 112.5 87 66.7
GSVIVG01034483001 Vitis vinifera HOM05D004490 ORTHO05D005353 3.0e-23 112.5 79 73.4
CAN.G905.35 Capsicum annuum HOM05D004490 ORTHO05D005353 3.9e-23 112.1 87 64.4
FAN07G2233 Fragaria x ananassa HOM05D004490 ORTHO05D005353 3.9e-23 112.1 98 61.2
FAN12G1529 Fragaria x ananassa HOM05D004490 ORTHO05D005353 3.9e-23 112.1 98 61.2
Lsat_1_v5_gn_5_105541 Lactuca sativa HOM05D004490 ORTHO05D005353 3.9e-23 112.1 88 65.9
QL02p033840 Quercus lobata HOM05D004490 ORTHO05D005353 3.9e-23 112.1 91 62.6
Sopen11g009650 Solanum pennellii HOM05D004490 ORTHO05D005353 3.9e-23 112.1 87 64.4
CARHR056930 Cardamine hirsuta HOM05D004490 ORTHO05D005353 5.1e-23 111.7 91 63.7
Prupe.8G058000 Prunus persica HOM05D004490 ORTHO05D005353 5.1e-23 111.7 91 63.7
RcHm_v2.0_Chr4g0398261 Rosa chinensis HOM05D004490 ORTHO05D005353 5.1e-23 111.7 91 63.7
Solyc11g018670.3 Solanum lycopersicum HOM05D004490 ORTHO05D005353 5.1e-23 111.7 87 64.4
arahy.Tifrunner.gnm1.ann1.2Y7GNB Arachis hypogaea HOM05D004490 ORTHO05D005353 6.6e-23 111.3 79 69.6
arahy.Tifrunner.gnm1.ann1.90XUFN Arachis hypogaea HOM05D004490 ORTHO05D005353 6.6e-23 111.3 79 69.6
Manes.02G191800 Manihot esculenta HOM05D004490 ORTHO05D005353 6.6e-23 111.3 79 69.6
Nitab4.5_0000277g0020 Nicotiana tabacum HOM05D004490 ORTHO05D005353 6.6e-23 111.3 87 64.4
EL10Ac1g00080 Beta vulgaris HOM05D004490 ORTHO05D005353 1.1e-22 110.5 91 63.7
CiPaw.16G061300 Carya illinoinensis HOM05D004490 ORTHO05D005353 1.1e-22 110.5 79 69.6
Thhalv10028527m.g Eutrema salsugineum HOM05D004490 ORTHO05D005353 1.5e-22 110.2 91 62.6
FvH4_4g06470 Fragaria vesca HOM05D004490 ORTHO05D005353 1.5e-22 110.2 98 60.2
CANSAT64G2929 Cannabis sativa HOM05D004490 ORTHO05D005353 1.9e-22 109.8 79 67.1
Gohir.D13G125400 Gossypium hirsutum HOM05D004490 ORTHO05D005353 1.9e-22 109.8 79 70.9
Gorai.013G140400 Gossypium raimondii HOM05D004490 ORTHO05D005353 1.9e-22 109.8 79 70.9
Hma1.2p1_0363F.1_g136650 Hydrangea macrophylla HOM05D004490 ORTHO05D005353 1.9e-22 109.8 79 69.6
Hma1.2p1_0363F.1_g136660 Hydrangea macrophylla HOM05D004490 ORTHO05D005353 1.9e-22 109.8 79 69.6
Nitab4.5_0002074g0010 Nicotiana tabacum HOM05D004490 ORTHO05D005353 1.9e-22 109.8 87 63.2
Prupe.3G081100 Prunus persica HOM05D004490 ORTHO05D005353 1.9e-22 109.8 78 70.5
PSO017G7136 Papaver somniferum HOM05D004490 ORTHO05D005353 2.5e-22 109.4 79 67.1
PSO063G0599 Papaver somniferum HOM05D004490 ORTHO05D005353 2.5e-22 109.4 79 67.1
THA.LOC104816311 Tarenaya hassleriana HOM05D004490 ORTHO05D005353 2.5e-22 109.4 91 63.7
Thecc.08G183200 Theobroma cacao HOM05D004490 ORTHO05D005353 2.5e-22 109.4 91 61.5
AL2G20400 Arabidopsis lyrata HOM05D004490 ORTHO05D005353 3.3e-22 109.0 91 61.5
AT1G65280 Arabidopsis thaliana HOM05D004490 ORTHO05D005353 3.3e-22 109.0 91 61.5
DCAR_014360 Daucus carota HOM05D004490 ORTHO05D005353 3.3e-22 109.0 91 62.6
HPP92_020159 Vanilla planifolia HOM05D004490 ORTHO05D005353 3.3e-22 109.0 79 69.6
Duzib177G0006 Durio zibethinus HOM05D004490 ORTHO05D005353 4.3e-22 108.6 79 69.6
Ca_10614_v3 Cicer arietinum L. HOM05D004490 ORTHO05D005353 5.6e-22 108.2 79 67.1
Glyma.10G216200 Glycine max HOM05D004490 ORTHO05D005353 5.6e-22 108.2 79 68.4
Sp6g08010 Schrenkiella parvula HOM05D004490 ORTHO05D005353 5.6e-22 108.2 91 62.6
Hund27085 Selenicereus undatus HOM05D004490 ORTHO05D005353 7.3e-22 107.8 87 64.4
Atru.chr12.1269 Acer truncatum HOM05D004490 ORTHO05D005353 9.6e-22 107.5 79 69.6
BcaB01g01408 Brassica carinata HOM05D004490 ORTHO05D005353 9.6e-22 107.5 91 61.5
Gohir.A13G121400 Gossypium hirsutum HOM05D004490 ORTHO05D005353 9.6e-22 107.5 79 69.6
Peaxi162Scf00848g00115 Petunia axillaris HOM05D004490 ORTHO05D005353 9.6e-22 107.5 87 64.4
TAR208G0002 Trochodendron aralioides HOM05D004490 ORTHO05D005353 9.6e-22 107.5 79 69.6
BcaC04g20957 Brassica carinata HOM05D004490 ORTHO05D005353 1.3e-21 107.1 91 61.5
A09p29500 Brassica napus HOM05D004490 ORTHO05D005353 1.3e-21 107.1 91 61.5
BolC9t56586H Brassica oleracea HOM05D004490 ORTHO05D005353 1.3e-21 107.1 91 61.5
BraA09t38516Z Brassica rapa HOM05D004490 ORTHO05D005353 1.3e-21 107.1 91 61.5
Cpa.g.sc66.44 Carica papaya HOM05D004490 ORTHO05D005353 2.1e-21 106.3 79 67.1
Sc23g0001210 Simmondsia chinensis HOM05D004490 ORTHO05D005353 2.1e-21 106.3 87 62.1
Ciclev10000724m.g Citrus clementina HOM05D004490 ORTHO05D005353 2.8e-21 105.9 78 67.9
FAN21G1156 Fragaria x ananassa HOM05D004490 ORTHO05D005353 2.8e-21 105.9 78 67.9
Lalb_Chr21g0305821 Lupinus albus HOM05D004490 ORTHO05D005353 2.8e-21 105.9 96 58.3
Carub.0002s1095 Capsella rubella HOM05D004490 ORTHO05D005353 3.6e-21 105.5 91 60.4
Phvul.007G089700 Phaseolus vulgaris HOM05D004490 ORTHO05D005353 3.6e-21 105.5 79 65.8
TPR.G8816 Trifolium pratense HOM05D004490 ORTHO05D005353 3.6e-21 105.5 79 67.1
Cfa018184 Carpinus fangiana HOM05D004490 ORTHO05D005353 4.8e-21 105.1 91 60.4
EL10Ac1g00082 Beta vulgaris HOM05D004490 ORTHO05D005353 8.1e-21 104.4 91 61.5
Eucgr.F04124 Eucalyptus grandis HOM05D004490 ORTHO05D005353 8.1e-21 104.4 112 53.6
ClCG09G010540 Citrullus lanatus HOM05D004490 ORTHO05D005353 1.1e-20 104.0 91 57.1
MELO3C024104.2 Cucumis melo HOM05D004490 ORTHO05D005353 1.1e-20 104.0 91 57.1
Lj5g0002115 Lotus japonicus HOM05D004490 ORTHO05D005353 1.1e-20 104.0 98 57.1
Os01g0521500 Oryza sativa ssp. japonica HOM05D004490 ORTHO05D005353 1.1e-20 104.0 79 65.8
Nn5g27710 Nelumbo nucifera HOM05D004490 ORTHO05D005353 1.4e-20 103.6 79 68.4
Psat6g187400 Pisum sativum HOM05D004490 ORTHO05D005353 1.4e-20 103.6 79 65.8
Zm00001eb427930 Zea mays HOM05D004490 ORTHO05D005353 1.4e-20 103.6 79 64.6
FAN25G1655 Fragaria x ananassa HOM05D004490 ORTHO05D005353 1.8e-20 103.2 78 66.7
RcHm_v2.0_Chr5g0081671 Rosa chinensis HOM05D004490 ORTHO05D005353 1.8e-20 103.2 79 65.8
Haze_17934 Corylus avellana HOM05D004490 ORTHO05D005353 4.0e-20 102.1 79 65.8
CsaV3_7G024020 Cucumis sativus L. HOM05D004490 ORTHO05D005353 4.0e-20 102.1 91 56.0
TWI63G0531 Tripterygium wilfordii HOM05D004490 ORTHO05D005353 4.0e-20 102.1 79 63.3
CDE08G1471 Ceratophyllum demersum HOM05D004490 ORTHO05D005353 1.5e-19 100.1 79 64.6
Glyma.20G175700 Glycine max HOM05D004490 ORTHO05D005353 4.4e-19 98.6 79 62.0
RcHm_v2.0_Chr5g0082081 Rosa chinensis HOM05D004490 ORTHO05D005353 5.8e-19 98.2 79 62.0
FAN11G3016 Fragaria x ananassa HOM05D004490 ORTHO05D005353 1.3e-18 97.1 81 64.2
SHI54375 Sapria himalayana HOM05D004490 ORTHO05D005353 6.4e-18 94.7 79 60.8
VMungo0720G0360 Vigna mungo HOM05D004490 ORTHO05D005353 1.1e-17 94.0 79 60.8
Pp3c14_7350 Physcomitrium patens HOM05D004490 ORTHO05D005353 3.2e-17 92.4 77 62.3
ATR1098G081 Amborella trichopoda HOM05D004490 ORTHO05D008312 5.4e-17 91.7 82 56.1
Aa31LG9G14890 Aethionema arabicum HOM05D004490 ORTHO05D005353 7.1e-17 91.3 120 45.8
Mapoly0003s0077 Marchantia polymorpha HOM05D004490 ORTHO05D005353 2.1e-16 89.7 94 51.1
Sed0010515 Sechium edule HOM05D004490 ORTHO05D005353 6.0e-16 88.2 91 50.5
FvH4_3g44932 Fragaria vesca HOM05D004490 ORTHO05D005353 3.0e-15 85.9 70 67.1
CBR_g58400 Chara braunii HOM05D004490 ORTHO05D005353 5.1e-15 85.1 95 48.4
AagrBONN_evm.TU.Sc2ySwM_228.3521 Anthoceros agrestis HOM05D004490 ORTHO05D005353 1.9e-14 83.2 77 57.1
AUR62004649 Chenopodium quinoa HOM05D004490 ORTHO05D005353 1.9e-14 83.2 87 51.7
FvH4_3g44966 Fragaria vesca HOM05D004490 ORTHO05D005353 4.8e-13 78.6 60 68.3
FAN11G3432 Fragaria x ananassa HOM05D004490 ORTHO05D005353 4.8e-13 78.6 60 68.3
Medtr1g096410 Medicago truncatula HOM05D004490 ORTHO05D005353 6.2e-13 78.2 79 54.4
FvH4_3g44892 Fragaria vesca HOM05D004490 ORTHO05D005353 1.8e-12 76.6 137 38.0
Oeu039613.1 Olea europaea HOM05D004490 ORTHO05D005353 5.3e-12 75.1 37 91.9
SHI09004 Sapria himalayana HOM05D004490 ORTHO05D005353 2.0e-11 73.2 61 60.7
RcHm_v2.0_Chr5g0082701 Rosa chinensis HOM05D004490 ORTHO05D005353 7.6e-11 71.2 76 52.6
Gorai.012G182200 Gossypium raimondii HOM05D004490 ORTHO05D005353 9.3e-09 64.3 79 53.2
MCO12G010 Micromonas commoda HOM05D004490 ORTHO05D005353 3.0e-07 59.3 77 44.2
PRCOL_00002362 Prasinoderma coloniale HOM05D004490 ORTHO05D005353 2.5e-06 56.2 79 43.0
PGSC0003DMG400016394 Solanum tuberosum HOM05D004490 ORTHO05D002367 3.3e-06 55.8 114 35.1
Gohir.A04G142550 Gossypium hirsutum HOM05D004490 ORTHO05D005353 5.6e-06 55.1 79 46.8


User provided reference genes

Program Settings